FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEWM (Triosephosphate isomerase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 82/203 (40.39%), Postives = 111/203 (54.68%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK + L + AE ++L + AQN GA+TGEVS +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAQLAQELFKKFATKLQNDSAEVVLCPPTIYLESVRQQLDANKEALNGCLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_RUTMC (Triosephosphate isomerase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=tpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 73/193 (37.82%), Postives = 108/193 (55.96%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 R+ + GNWK N + E +V + ++ S ++ AQN V K GAFTGE+SA+M+ + +VI+GHSERR+L E+++ V KV AL L + C+GE LE RES +T +VV++Q + + ++ I + N+++AYEPVWAIGT ATP QAQ+ HA +R L Sbjct: 2 RQIIIAGNWKMNASKEATNTLVIGILSGMADVKSKVIVCVPSLYMSQVEVL-VVDSQLNLGAQNLNVNKLGAFTGEISADMIKDFGAKYVIVGHSERRSLYGETDEIVAQKVQVALDNNLTPLFCIGELLEDRESNNTKSVVSKQIQVVIDRVGIEAFKNIIVAYEPVWAIGTNVTATPQQAQDTHAFIRSML 193
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBP (Triosephosphate isomerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 80/192 (41.67%), Postives = 108/192 (56.25%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRK 646 RK + GNWK N T E K+I L A S+ R S V AQN + A TGE+S L L I V++GHSERR L E+++F K++Y L GL+V+ CVGET +RE G+T +V+ +Q + I++ + N+V+AYEPVWAIGTGKVATP +A+E HA +RK Sbjct: 2 RKKIIAGNWKMNLTLAEAKEITKGLLSA--CDSSSYEIMVFPSALHLESVASIARDSQLIVGAQNAYQSGLTAMTGEISPVQLAELGIQTVLVGHSERRQFLGETSEFDNTKISYFLKHGLRVVYCVGETWAEREKGNTFSVLEDQIGKGLKGITSDLFKNLVIAYEPVWAIGTGKVATPVEAEEAHAFIRK 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBA (Triosephosphate isomerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 80/192 (41.67%), Postives = 108/192 (56.25%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRK 646 RK + GNWK N T E K+I L A S+ R S V AQN + A TGE+S L L I V++GHSERR L E+++F K++Y L GL+V+ CVGET +RE G+T +V+ +Q + I++ + N+V+AYEPVWAIGTGKVATP +A+E HA +RK Sbjct: 2 RKKIIAGNWKMNLTLAEAKEITKGLLSA--CDSSSYEIMVFPSALHLESVASIARDSQLIVGAQNAYQSGLTAMTGEISPVQLAELGIQTVLVGHSERRQFLGETSEFDNTKISYFLKHGLRVVYCVGETWAEREKGNTFSVLEDQIGKGLKGITSDLFKNLVIAYEPVWAIGTGKVATPVEAEEAHAFIRK 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_ERWCT (Triosephosphate isomerase OS=Erwinia carotovora subsp. atroseptica GN=tpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 75/186 (40.32%), Postives = 101/186 (54.30%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 V GNWK NG++ V ++++ L + L S + AQN V GAFTGE SAEML ++ ++I+GHSERR ES++F+ K GL + C+GET + E+G T AV A Q A+ + ++N V+AYEPVWAIGTGK ATPAQAQ VH +R Sbjct: 6 VMGNWKLNGSTNLVNELIAGLRKELSTVDGCGVAIAPPAIYLDQANHQLAGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFGVLKDAGLIPVLCIGETEAENEAGQTEAVCARQLDAVLNTLGAKAFENTVVAYEPVWAIGTGKSATPAQAQAVHKFIR 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PARD8 (Triosephosphate isomerase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.217e-30 Identity = 78/194 (40.21%), Postives = 108/194 (55.67%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSD-FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 RK V GNWK N T E + L+EA + + ++ VAA+NC ++ GA+TGEVSA M+ + +VILGHSERRA +E+ + + KV AL+ GL I C+GE LE+RE+G VV Q +S ++ ++LAYEPVWAIGTGK A+ QA+E+HA +R L Sbjct: 2 RKNIVAGNWKMNTTLAEGLALAKGLDEALKGKTPNCDVIIGTPFTHLASVAAAIDTNKIGVAAENCADKEKGAYTGEVSAAMVASTGAKYVILGHSERRAYYHETPEILKTKVELALANGLTPIFCIGEVLEEREAGKHFEVVDAQIAGSLFDLSAEDFGKIILAYEPVWAIGTGKTASAEQAEEIHAHIRATL 195 HSP 2 Score: 23.0978 bits (48), Expect = 1.217e-30 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 670 EVAASTRIIYGGFCN 714 EVA + I+YGG CN Sbjct: 202 EVADNCTILYGGSCN 216
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_VESOH (Triosephosphate isomerase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30 Identity = 75/194 (38.66%), Postives = 110/194 (56.70%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE--KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 R+ + GNWK N + E +V + ++L+ S ++ AQ+ + K GAFTGEVS +M+ + +VI+GHSERR+L E+N+ V KV AL+ L + C+GE LE R+SG T VV+EQ +A+ + I + ++++AYEPVWAIGTG ATP QAQ+ HA +R L Sbjct: 2 RQVIIAGNWKMNASKEATNILVMDI--LSGMVDVKSKVIICVPFPYMAQVEALVGCSQLNLGAQDLNINKSGAFTGEVSVDMIKDFGARYVIVGHSERRSLYFENNEIVAQKVQVALNNNLTPLLCIGELLEDRDSGKTQEVVSEQIQAVIDLVGIDAFKDIIVAYEPVWAIGTGITATPQQAQDTHAFIRSML 193
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHESR (Triosephosphate isomerase OS=Shewanella sp. (strain MR-7) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK S L + AE ++L S + AQN GA+TGEVS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + +K +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEANKEALDGSLVRMGAQNLSQHDFGAYTGEVSGQMLKDCGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHESM (Triosephosphate isomerase OS=Shewanella sp. (strain MR-4) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK S L + AE ++L S + AQN GA+TGEVS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + +K +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEANKEALDGSLVRMGAQNLSQHDFGAYTGEVSGQMLKDCGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHESA (Triosephosphate isomerase OS=Shewanella sp. (strain ANA-3) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK S L + AE ++L S + AQN GA+TGEVS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + +K +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEANKEALDGSLVRMGAQNLSQHDFGAYTGEVSGQMLKDCGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |