FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEON (Triosephosphate isomerase OS=Shewanella oneidensis GN=tpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK S L + AE ++L S + AQN GA+TGEVS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + +K +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEANKEALDGSLVRMGAQNLSQHDFGAYTGEVSGQMLKDCGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PELPD (Triosephosphate isomerase OS=Pelobacter propionicus (strain DSM 2379) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30 Identity = 83/194 (42.78%), Postives = 109/194 (56.19%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQ-TKAIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMSV 667 + GNWK + T E +V L +L SD +AAQ+C+ + GAFTGEVS L + VI+GHSERR L E+++ V K A++ GL I CVGET+E+RES +T VV Q T A+A +S+ + +V+AYEPVWAIGTGK AT QAQEVH +R L TMS+ Sbjct: 6 IAGNWKLHKTIAESLAMVDELKPLVAGSRGVEIVVAPVFTALKSVSFALNGSDIGLAAQDCFWEEQGAFTGEVSPAQLRDAGCSHVIIGHSERRQLFGETDEGVNRKARAAVAVGLTAIICVGETMEERESRATFTVVGRQVTAALAGFLSHEFSRIVIAYEPVWAIGTGKTATDQQAQEVHCYIRN-LVTMSI 198
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CHLTE (Triosephosphate isomerase OS=Chlorobium tepidum GN=tpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30 Identity = 79/183 (43.17%), Postives = 96/183 (52.46%), Query Frame = 2 Query: 98 GNWKCNGT-SEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 GNWK N T +E V + + K + S + AQNC G FTGEVS ML +VILGHSERR L E+N V KV AL+ GL VI CVGETL++RE G T +V Q +++ +V+AYEPVWAIGTGK AT QAQEVHA +R Sbjct: 3 GNWKMNNTIAESVDLATAIAEKVGADGVQCEVGIAPTFPALYEVCKVIEWSGIRLCAQNCHYESDGPFTGEVSTRMLAAAGCSYVILGHSERRQLFGETNATVNLKVKKALAEGLSVILCVGETLDERERGVTGQIVTAQVVEGLIDVTDISKLVIAYEPVWAIGTGKTATKEQAQEVHALIR 185
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHESW (Triosephosphate isomerase OS=Shewanella sp. (strain W3-18-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK S L + AE ++L S + AQN GA+TGEVS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + +K +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEANKEALDGSLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEPC (Triosephosphate isomerase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK S L + AE ++L S + AQN GA+TGEVS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + +K +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEANKEALDGSLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEB9 (Triosephosphate isomerase OS=Shewanella baltica (strain OS195) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK S L + AE ++L S + AQN GA+TGEVS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + +K +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEANKEALDGSLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEB8 (Triosephosphate isomerase OS=Shewanella baltica (strain OS185) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK S L + AE ++L S + AQN GA+TGEVS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + +K +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEANKEALDGSLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEB5 (Triosephosphate isomerase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK S L + AE ++L S + AQN GA+TGEVS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + +K +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEANKEALDGSLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CYTH3 (Triosephosphate isomerase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30 Identity = 75/194 (38.66%), Postives = 108/194 (55.67%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTL-NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 RK + GNWK N T EE + S + N A+ ++ + AQN + ++ GAFTGE+SA ML ++ + +VI+GHSERR E+N + DKV +L+ GL + C GETL QRE+G + V Q +S ++ VV+AYEP+WAIGTG A+ QAQE+HA++R+ L Sbjct: 2 RKKVIAGNWKMNKTLEEGLSLASEVANMAKDEVPADVNLVMCIPYISLAAVSKVINDKVAIGAQNVYQKESGAFTGEISAPMLKSVGVKYVIIGHSERREYFGETNQQLADKVTISLANGLTPLFCCGETLAQREAGIHINFVNAQLTESLFHLSPEDFKKVVIAYEPIWAIGTGVTASDEQAQEMHAKIREHL 195
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPK (Triosephosphate isomerase OS=Pseudomonas putida (strain KT2440) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.064e-30 Identity = 76/191 (39.79%), Postives = 107/191 (56.02%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVR-KGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 R+ V GNWK +GT V ++ L+ L + V AQN V+ + GA TGEV+ E LV V++GHSERR ++ E+++ + K A A ++GLK + C+GETLE+RE+G T+ VV Q +I E + + + V+AYEPVWAIGTG ATP QAQ+VHA +R Sbjct: 2 RRPMVAGNWKMHGTRASVAELTKGLSNLALPSGVEVAVFPPALFINQVID-GLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIR 191 HSP 2 Score: 21.9422 bits (45), Expect = 2.064e-30 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 667 AEVAASTRIIYGG 705 AEVAA +++YGG Sbjct: 199 AEVAAKVQLLYGG 211 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |