FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PSEP1 (Triosephosphate isomerase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.064e-30 Identity = 76/191 (39.79%), Postives = 107/191 (56.02%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVR-KGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 R+ V GNWK +GT V ++ L+ L + V AQN V+ + GA TGEV+ E LV V++GHSERR ++ E+++ + K A A ++GLK + C+GETLE+RE+G T+ VV Q +I E + + + V+AYEPVWAIGTG ATP QAQ+VHA +R Sbjct: 2 RRPMVAGNWKMHGTRASVAELTKGLSNLALPSGVEVAVFPPALFINQVID-GLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIR 191 HSP 2 Score: 21.9422 bits (45), Expect = 2.064e-30 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 667 AEVAASTRIIYGG 705 AEVAA +++YGG Sbjct: 199 AEVAAKVQLLYGG 211
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_YERE8 (Triosephosphate isomerase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30 Identity = 73/186 (39.25%), Postives = 101/186 (54.30%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 V GNWK NG++ V ++++ L + L S + AQN V GAFTGE SAEML ++ ++I+GHSERR ES++F+ K GL + C+GET + E+G T AV A+Q A+ + ++ V+AYEP+WAIGTGK ATPAQAQ VH +R Sbjct: 6 VMGNWKLNGSTHMVNELIANLRKELSTVEGCGVAIAPPAIYLNQAKHELSGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDEFIAKKFGVLKEVGLTPVLCIGETEAENEAGQTEAVCAKQLDAVLNTLGAKAFEGAVIAYEPIWAIGTGKSATPAQAQAVHKFIR 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEDO (Triosephosphate isomerase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 81/203 (39.90%), Postives = 111/203 (54.68%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG + E KK S L + AE ++L + + AQN GA+TGE+S +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGNAALAQELFKKFASKLQNDSAEVVLCPPSIYLESVRQLLEDNKQALDGALVRMGAQNVSQHDFGAYTGEISGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PSYIN (Triosephosphate isomerase OS=Psychromonas ingrahamii (strain 37) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 74/193 (38.34%), Postives = 99/193 (51.30%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE--KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 V GNWK NGT E V ++ + A + + + AQ+ GAFTGE S M+ + ++GHSERR NE++ V K + GL + C+GETLE+RE+ T VV Q KA+ + I +N V+AYEPVWAIGTGKVA+ QAQ+VHA +R WL S Sbjct: 6 VMGNWKLNGTKESVSALIKGIEAAADAAKNVEVAVCPPTIFIEQVANLVANNSIELGAQDVSTNISGAFTGETSPVMVKEFGAKYSLVGHSERRQYHNETDAVVAAKFVAIQANGLVPVLCIGETLEERETDKTFNVVETQLKAVIDVSGIDALENAVIAYEPVWAIGTGKVASSEQAQDVHAHIRTWLAEQS 198
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_AZOSB (Triosephosphate isomerase OS=Azoarcus sp. (strain BH72) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 76/188 (40.43%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 649 + GNWK NG+ + ++ L AE + S + AQ+ + GA+TGEVSA MLV +VI+GHSERRAL +S+ VG K A AL+ GL I CVGETL +RE G AV+ Q +A+A+ + +V+AYEPVWAIGTG+ ATP Q + H +R W Sbjct: 6 IAGNWKLNGSLAKNAALIDELRRAEMHCVVCVPYPYLAQAQAL-----VAGSLIELGAQDVSEYEQGAYTGEVSAAMLVEFGCRYVIVGHSERRALFGDSDQVVGRKAASALAAGLTPIVCVGETLAERELGEVEAVIRRQLQAVADCVGGEALPTLVVAYEPVWAIGTGRSATPEQVAQTHGFIRAW 188
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEPW (Triosephosphate isomerase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30 Identity = 80/203 (39.41%), Postives = 110/203 (54.19%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK + L + AE ++L + QN GA+TGE+S +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAQLAQELFKKFATKLQNDSAEVVLCPPSIYLESVRQLLDENKEALNGCLVRMGTQNVSQHDFGAYTGEISGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PHOLL (Triosephosphate isomerase OS=Photorhabdus luminescens subsp. laumondii GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30 Identity = 72/186 (38.71%), Postives = 104/186 (55.91%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 V GNWK NG++ V ++++ L + ++L S + AQ+ V GAFTGE SA ML ++ ++I+GHSERR ES++F+ K A +GL + C+GET ++ E+G T +V A Q A+ ++ + V+AYEPVWAIGTGK ATPAQAQ VH +R Sbjct: 6 VMGNWKLNGSTHMVNELITGLRQELSSVTGCDVAIAPPALYLSQAKQALAGSRIALGAQDVDVNLSGAFTGETSATMLKDIGAEYIIIGHSERRTYHQESDEFIAKKFAILKQQGLIPVLCIGETEQENEAGQTESVCARQIDAVLNTLGVAAFQGAVIAYEPVWAIGTGKSATPAQAQAVHKFIR 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_ACTPJ (Triosephosphate isomerase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30 Identity = 77/194 (39.69%), Postives = 109/194 (56.19%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVA--AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 MAR+ V GNWK NG+ K++++ L +AE ++ L +A AQN V GAFTG++S EML + ++I+GHSERR E + F+ K A + GL + C+GET + E+G T AV A+Q A+ + + ++ V+AYEP+WAIGTGK ATPAQAQ VHA +R Sbjct: 1 MARRPLVMGNWKLNGSKAFTKELIAGL-KAELADVKGCDVAIAPPVMYLAEAEAALAGQSVIALGAQNVDVNVQGAFTGDISTEMLKDFGAKYIIIGHSERRTYHKECDTFIAKKFAALKAAGLVPVLCIGETEAENEAGQTEAVCAKQIDAVIDALGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIR 193
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_ACTP7 (Triosephosphate isomerase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30 Identity = 77/194 (39.69%), Postives = 109/194 (56.19%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVA--AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 MAR+ V GNWK NG+ K++++ L +AE ++ L +A AQN V GAFTG++S EML + ++I+GHSERR E + F+ K A + GL + C+GET + E+G T AV A+Q A+ + + ++ V+AYEP+WAIGTGK ATPAQAQ VHA +R Sbjct: 1 MARRPLVMGNWKLNGSKAFTKELIAGL-KAELADVKGCDVAIAPPVMYLAEAEAALAGQSVIALGAQNVDVNVQGAFTGDISTEMLKDFGAKYIIIGHSERRTYHKECDTFIAKKFAALKAAGLVPVLCIGETEAENEAGQTEAVCAKQIDAVIDALGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIR 193
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_ACTP2 (Triosephosphate isomerase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30 Identity = 77/194 (39.69%), Postives = 109/194 (56.19%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVA--AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 MAR+ V GNWK NG+ K++++ L +AE ++ L +A AQN V GAFTG++S EML + ++I+GHSERR E + F+ K A + GL + C+GET + E+G T AV A+Q A+ + + ++ V+AYEP+WAIGTGK ATPAQAQ VHA +R Sbjct: 1 MARRPLVMGNWKLNGSKAFTKELIAGL-KAELADVKGCDVAIAPPVMYLAEAEAALAGQSVIALGAQNVDVNVQGAFTGDISTEMLKDFGAKYIIIGHSERRTYHKECDTFIAKKFAALKAAGLVPVLCIGETEAENEAGQTEAVCAKQIDAVIDALGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIR 193 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |