FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_THIDA (Triosephosphate isomerase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30 Identity = 83/190 (43.68%), Postives = 104/190 (54.74%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 RK V GNWK +G+ E +++ L A +L S AQN GAFTGEVSA ML++ +VI+GHSERR+L ES+ V K A + GL I CVGE+L +RESG T VVA Q A+ A I++ V+AYEPVWAIGTGK A+P QAQ VHA +R Sbjct: 2 RKKLVAGNWKMHGSLAENAALLAALKPA---LQGIEAAVCVPFPYLAQVQTALAGSSLAWGAQNVSEHGKGAFTGEVSASMLLDFGCKYVIVGHSERRSLYGESDALVAAKYMAAQAAGLTPILCVGESLAERESGVTEQVVARQLDAVVAAAGIASLARAVVAYEPVWAIGTGKTASPEQAQAVHAFIR 188
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHESH (Triosephosphate isomerase OS=Shewanella sediminis (strain HAW-EB3) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30 Identity = 81/203 (39.90%), Postives = 109/203 (53.69%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTLNE--AEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E K + L + AE +L + AQN GA+TGEVS +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAQLALELFNKFATKLQDDSAEVVLCPPSIYLESVRQQLDANKDALNGCLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTH (Triosephosphate isomerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30 Identity = 80/198 (40.40%), Postives = 104/198 (52.53%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTM 661 M+RK GNWK N T +E + V L + ++ S+ VAAQN + GAFTGEVS ML L + +VI+GHSERR E+++ V KV A GLK I CVGE+L QRE G T +V Q K +S V+AYEP+WAIGTGK AT QA+EV +R+ +K + Sbjct: 1 MSRKVIAAGNWKMNKTPKEAVEFVQAL-KGRVADADTEVVVGVPFVCLPGVVEAAKGSNIKVAAQNMHWEEKGAFTGEVSGPMLAELGVDYVIIGHSERRQYFGETDETVNKKVHAAFKYGLKPIICVGESLTQREQGVTAELVRYQVKIALLGLSAEQVKEAVIAYEPIWAIGTGKTATNEQAEEVCGIIRECIKEL 197
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_THEP3 (Triosephosphate isomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.453e-30 Identity = 76/196 (38.78%), Postives = 107/196 (54.59%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTM 661 R+ + GNWK + T E K+V L + K + ++ + AQ+ + + GA+TGE+S ML + + +V++GHSERR E+++ V KV ALS GL I CVGE+L QRE G T VV QTK + +S+ D NVV+AYEP+WAIGTGK AT A EV LR + ++ Sbjct: 2 RRPIIAGNWKMHMTPSEAVKLVEELIP-QVKDAKAEVVVIPPFVDLTEVNKVIQGTNILLGAQDMFWEEKGAYTGEISPLMLKEIGVKYVVIGHSERRQYFGETDEMVNKKVLSALSHGLSPIVCVGESLSQREEGKTFEVVLNQTKEALKGVSHDDIVNVVIAYEPIWAIGTGKTATAKDANEVIKALRNTIASL 196
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEAM (Triosephosphate isomerase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.427e-30 Identity = 80/203 (39.41%), Postives = 110/203 (54.19%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTL--NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK L + AE ++L + AQN GA+TGE+S +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +R+ L +S Sbjct: 4 RRPMVAGNWKMNGSAALAQELFKKFAVKLQNDSAEVVLCPPTIYLESVRQLLEANKEALNGCLVRMGAQNLSQHDFGAYTGEISGQMLKDSGCRYVIVGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRRRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PROVI (Triosephosphate isomerase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.427e-30 Identity = 76/189 (40.21%), Postives = 105/189 (55.56%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEA-EXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 R+ V GNWK N T E ++ S + A +++ S+ + AQNC GAFTGEVS ML L +VI+GHSERR E++ V ++ L+ G+K I CVGETLE+RESG+ AVV+ Q + + + ++V+AYEPVWAIGTG+ A+ QAQEVH +R Sbjct: 2 RRKIVVGNWKMNKTVAESTELASAVVAALGSDCSACEAGIAPTYPALDSVGRTIKGSEVLLVAQNCHYEDDGAFTGEVSTGMLNALGCSYVIIGHSERRQYFGETDATVNLRIKKVLAAGMKAILCVGETLEERESGAFEAVVSTQVTGGLQGVVDISDIVIAYEPVWAIGTGRTASSEQAQEVHKIIR 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CLOB8 (Triosephosphate isomerase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.427e-30 Identity = 77/196 (39.29%), Postives = 105/196 (53.57%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTM 661 RK + GNWK N T +E K+V L K++ S+ VAAQN + GAFTGEV+ ML + I +V+LGHSERR NE+++ + KV A + I C GE+LEQRE+G+T V+ Q KA ++N + +V+AYEP+WAIGTGK AT QA E +R + M Sbjct: 2 RKAIIAGNWKMNKTIDEAVKMVEELKPL-VKDATCDVVVCPTFVCLDAVKKAVAGSNIKVAAQNMHFEESGAFTGEVAPGMLEAMGIDYVVLGHSERREYFNETDEALNKKVKKAFEHNITPILCCGESLEQRENGTTNKVIEAQIKADIAGLTNEQVEKLVIAYEPIWAIGTGKTATDEQANETIKAIRAMVAEM 196
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHEHH (Triosephosphate isomerase OS=Shewanella halifaxensis (strain HAW-EB4) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.101e-29 Identity = 80/203 (39.41%), Postives = 110/203 (54.19%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTS----EEVKKIVSTLNE--AEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NG++ E KK + L + AE ++L + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGSAQLAQELFKKFATKLQDDSAEVVLCPPSIYLESVRQLLDENKEALNGCLVRMGAQNLSQHDFGAYTGEISGQMLKDSGCRYVIIGHSERRRMYGETSVIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SALTY (Triosephosphate isomerase OS=Salmonella typhimurium GN=tpiA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.101e-29 Identity = 72/186 (38.71%), Postives = 101/186 (54.30%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 V GNWK NG+ V ++V+ L + ++ S + AQN + GAFTGE SAEML ++ ++I+GHSERR ES++ + K A +GL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH +R Sbjct: 6 VMGNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIR 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SALSV (Triosephosphate isomerase OS=Salmonella schwarzengrund (strain CVM19633) GN=tpiA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.101e-29 Identity = 72/186 (38.71%), Postives = 101/186 (54.30%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 V GNWK NG+ V ++V+ L + ++ S + AQN + GAFTGE SAEML ++ ++I+GHSERR ES++ + K A +GL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH +R Sbjct: 6 VMGNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIR 191 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |