FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_FRATT (Triosephosphate isomerase OS=Francisella tularensis subsp. tularensis GN=tpiA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.645e-25 Identity = 68/187 (36.36%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 98 GNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 GNWK NG S +K++ S +++ + S L V QN GA+TGE+SA ML ++ ++++GHSERR+L ES++ V K+ + + + C+GE+L+ R+SG V+A Q I E +S VV+AYEPVWAIGTG VA+ Q QE H +R L Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSVYVKEVI-SQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRSLL 192
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_FRAT1 (Triosephosphate isomerase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tpiA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.645e-25 Identity = 68/187 (36.36%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 98 GNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 GNWK NG S +K++ S +++ + S L V QN GA+TGE+SA ML ++ ++++GHSERR+L ES++ V K+ + + + C+GE+L+ R+SG V+A Q I E +S VV+AYEPVWAIGTG VA+ Q QE H +R L Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSVYVKEVI-SQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRSLL 192
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_DESVM (Triosephosphate isomerase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tpiA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.645e-25 Identity = 58/137 (42.34%), Postives = 87/137 (63.50%), Query Frame = 2 Query: 251 FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 + V Q+ + GA+TGE+S ML++ WV+ GHSERR ++ ES++ VG K A++++ GLKV+ C+GET+E+RE+G V+ Q + + + +AYEPVWAIGTGKVA P + E HA +R+ L Sbjct: 61 YSVGGQDVYPAAEGAYTGEISPGMLMDCGCAWVLTGHSERRHVIGESDELVGAKTAFSINAGLKVVLCIGETIEEREAGRLGEVLERQLETGLAGVKGDAVPAAIAVAYEPVWAIGTGKVAGPPEIVEAHALVRQLL 197
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_BACP2 (Triosephosphate isomerase OS=Bacillus pumilus (strain SAFR-032) GN=tpiA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.645e-25 Identity = 68/191 (35.60%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRK 646 RK + GNWK N T E V + + +D + AQN + GAFTGE+S L +L I + ++GHSERR E+++ V K A G+ I CVGETLE+RE+G T +VA+Q K + V+AYEP+WAIGTGK +T A +V A +R+ Sbjct: 2 RKPIIAGNWKMNKTLGEAVSFVEEVKSSIPYPDKVEAIVCAPALFLEKLNSLSNGTDLKIGAQNMHFEENGAFTGEISPAALKDLGIGYSVIGHSERREFFAETDETVNKKAHAAFKHGIVPIICVGETLEEREAGKTNELVADQVKKALAGFTTQQVAESVIAYEPIWAIGTGKSSTAKDANDVCAHIRQ 192
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS1_LISMF (Triosephosphate isomerase 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tpiA1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.645e-25 Identity = 66/190 (34.74%), Postives = 96/190 (50.53%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV--VLAYEPVWAIGTGKVATPAQAQEVHAELR 643 RK + GNWK N T+ + + + + ++ VAAQNC+ GAFTGE+S L +L + +VI+GHSERR +E+++ + K G+ I C GETL+QRE+G T V Q +A ++ + V+AYEP+WAIGTGK +T A A E A +R Sbjct: 2 RKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTNLRVAAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIR 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS1_LISIN (Triosephosphate isomerase 1 OS=Listeria innocua GN=tpiA1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.645e-25 Identity = 66/190 (34.74%), Postives = 96/190 (50.53%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV--VLAYEPVWAIGTGKVATPAQAQEVHAELR 643 RK + GNWK N T+ + + + + ++ VAAQNC+ GAFTGE+S L +L + +VI+GHSERR +E+++ + K G+ I C GETL+QRE+G T V Q +A ++ + V+AYEP+WAIGTGK +T A A E A +R Sbjct: 2 RKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTNLRVAAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIR 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_RHOSR (Triosephosphate isomerase OS=Rhodococcus sp. (strain RHA1) GN=tpiA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.148e-25 Identity = 76/199 (38.19%), Postives = 99/199 (49.75%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLN-EAEXXXXXXXXXXXXXXXXXXXXXKSLLRSD---FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 MARK + GNWK N E +V + ++L+ D AQ+ GA+TGE+S ML L +V++GHSERR L E ND V K AL G+ I C+GE L+ RE+G V+ EQ + +S D VV+AYEPVWAIGTG+VA+ A AQEV A +R L Sbjct: 1 MARKPLIAGNWKMNLNHLEAIALVQKIAFSLPAKYFDKVDVTVIPPFTDIRSVQTLVEGDKLLLTYGAQDVSAHDSGAYTGEISGSMLAKLGCTFVVVGHSERRTLHCEDNDTVLAKTKAALKNGITPIVCIGEGLDVREAGEHVSYNVEQLRGSLAGLSGEDIAKVVIAYEPVWAIGTGRVASAANAQEVCAAIRATL 199
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCTU (Triosephosphate isomerase OS=Mycobacterium tuberculosis GN=tpiA PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.148e-25 Identity = 78/206 (37.86%), Postives = 106/206 (51.46%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKA-----IAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 M+RK + GNWK N E V+KI +L + + AQ+ GA+TG+VS L L +V++GHSERR NE + V K A AL GL I C+GE L+ RE+G+ VA EQ + +AE+I +VV+AYEPVWAIGTG+VA+ A AQEV A +RK L +++ Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIG---SVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLA 203
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCTA (Triosephosphate isomerase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tpiA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.148e-25 Identity = 78/206 (37.86%), Postives = 106/206 (51.46%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKA-----IAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 M+RK + GNWK N E V+KI +L + + AQ+ GA+TG+VS L L +V++GHSERR NE + V K A AL GL I C+GE L+ RE+G+ VA EQ + +AE+I +VV+AYEPVWAIGTG+VA+ A AQEV A +RK L +++ Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIG---SVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLA 203
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCBO (Triosephosphate isomerase OS=Mycobacterium bovis GN=tpiA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.148e-25 Identity = 78/206 (37.86%), Postives = 106/206 (51.46%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKA-----IAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 M+RK + GNWK N E V+KI +L + + AQ+ GA+TG+VS L L +V++GHSERR NE + V K A AL GL I C+GE L+ RE+G+ VA EQ + +AE+I +VV+AYEPVWAIGTG+VA+ A AQEV A +RK L +++ Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIG---SVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLA 203 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |