FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_BACME (Triosephosphate isomerase OS=Bacillus megaterium GN=tpiA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 72/190 (37.89%), Postives = 92/190 (48.42%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQT-KAIAEKISNW-DNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 RK + GNWK N E V + A ++ +D + AQN + GAFTGEVS L +L + +VILGHSERR + E+++ V K A GL I C GET E+ E T VVA Q KA+A V+AYEP+WAIGTGK +T A EV A +R Sbjct: 2 RKPIIAGNWKMNKVLSEATSFVEEVKGAVPSPESVDSVVCAPALFLDRLVEATKGTDLKIGAQNMHFEENGAFTGEVSPVALADLGVNYVILGHSERREMFAETDETVNQKTIAAFKHGLTPIVCCGETNEEYEQDQTKTVVANQVQKALAGLTDEQVKQTVIAYEPIWAIGTGKSSTAEGANEVCAYIR 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_ACIF2 (Triosephosphate isomerase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=tpiA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 67/192 (34.90%), Postives = 97/192 (50.52%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI---SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRK 646 R V GNWK NG S + + + A + S QN + GA+TGE+S ML ++ +V++GHSERR + ES+ + K+ AL GL + CVGET +R G T AV+ Q +A+ + ++ N+++AYEPVWAIGTG A+P QAQ VH +R+ Sbjct: 2 RPTMVAGNWKMNGLSGDAVHLTQAILHAGLEPMRPEVVIFPPFTLLHAVSQEAKSSALRWGGQNLFWEASGAYTGEISGAMLRDMGCRYVLIGHSERRQIFAESDAQIVQKIKAALLSGLIPVVCVGETEAERAQGLTDAVLRRQLEAVLPLLNLEASQPNLIIAYEPVWAIGTGLSASPEQAQAVHVFIRE 193
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_STAES (Triosephosphate isomerase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.951e-25 Identity = 69/199 (34.67%), Postives = 100/199 (50.25%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTL------NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 + GNWK N T +E K V+ L E E L+ + AQN + + GA+TGE S L L + +V++GHSERR +E+++ V K + G+ I CVGE+ E+RE+G +V Q K E +S+ VV+AYEP+WAIGTGK +T A E+ A +R+ L +S Sbjct: 6 IAGNWKMNKTVQEAKDFVNELPTLPDPKEVESVICAPTIQLDALVTAVKDGKAKGLK----IGAQNAYFEESGAYTGETSPVALSELGVKYVVIGHSERRDYFHETDEEVNKKAHAIFNHGMTPIICVGESDEEREAGKANKIVGNQVKKAVEGLSDDQLKEVVIAYEPIWAIGTGKSSTSEDANEMCAHVRQTLADLS 200 HSP 2 Score: 22.3274 bits (46), Expect = 2.951e-25 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 655 DNVSAEVAASTRIIYGG 705 D S EVA +TRI YGG Sbjct: 198 DLSSQEVADATRIQYGG 214
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_STAEQ (Triosephosphate isomerase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.951e-25 Identity = 69/199 (34.67%), Postives = 100/199 (50.25%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTL------NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 + GNWK N T +E K V+ L E E L+ + AQN + + GA+TGE S L L + +V++GHSERR +E+++ V K + G+ I CVGE+ E+RE+G +V Q K E +S+ VV+AYEP+WAIGTGK +T A E+ A +R+ L +S Sbjct: 6 IAGNWKMNKTVQEAKDFVNELPTLPDPKEVESVICAPTIQLDALVTAVKDGKAKGLK----IGAQNAYFEESGAYTGETSPVALSELGVKYVVIGHSERRDYFHETDEEVNKKAHAIFNHGMTPIICVGESDEEREAGKANKIVGNQVKKAVEGLSDDQLKEVVIAYEPIWAIGTGKSSTSEDANEMCAHVRQTLADLS 200 HSP 2 Score: 22.3274 bits (46), Expect = 2.951e-25 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 655 DNVSAEVAASTRIIYGG 705 D S EVA +TRI YGG Sbjct: 198 DLSSQEVADATRIQYGG 214
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHR (Triosephosphate isomerase OS=Mycoplasma hyorhinis GN=tpiA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 67/191 (35.08%), Postives = 100/191 (52.36%), Query Frame = 2 Query: 83 KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSD---FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRK 646 K + GNWK N T + K+ S N+ + + +A QN + GA+TGE+SA+ML++L++ + I+GHSERR E++ V K A+ + + CVGETLE+ E+ T V+ Q K + + + V++AYEP+WAIGTGK ATP QAQ+V +RK Sbjct: 3 KTIIIGNWKMNKTFTQTKEFFSAFNQLYIENKNKINQNLDFAVALPAINVAAFSKNTTKLELAVQNMSQFEKGAYTGEISAQMLLDLNVKYAIIGHSERRQYFKETDLDVNAKTQQAIKNNIIPVVCVGETLEEYEAQKTSQVIEYQLKNSLKDV-DLSKVIVAYEPIWAIGTGKTATPEQAQQVCKFIRK 192
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_DEHSC (Triosephosphate isomerase OS=Dehalococcoides sp. (strain CBDB1) GN=tpiA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 70/192 (36.46%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 R+ + GNWK N T E +V ++ + E K++L S + AQN + ++ GA+TGE+S ML L +VI+GHSERRA E+ V K+ AL GL I CVGE E+ E+G T V+ Q K + + N +++AYEP+WAIGTGK AT ++A +R+ L Sbjct: 2 RQIIIAGNWKMNTTLSEACTLVQSM-KCELERIEGIEKIICPPFISLYPIKTILENSSIKLGAQNLFYQEKGAYTGEISPLMLKELC-QYVIIGHSERRAYFGETGQVVNQKIKAALQAGLLPIVCVGEKPEENENGQTRQVLETQLKEALDGL-NLSCIIIAYEPIWAIGTGKAATASEANSAIGYIRRVL 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_DEHSB (Triosephosphate isomerase OS=Dehalococcoides sp. (strain BAV1) GN=tpiA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 70/192 (36.46%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 R+ + GNWK N T E +V ++ + E K++L S + AQN + ++ GA+TGE+S ML L +VI+GHSERRA E+ V K+ AL GL I CVGE E+ E+G T V+ Q K + + N +++AYEP+WAIGTGK AT ++A +R+ L Sbjct: 2 RQIIIAGNWKMNTTLSEACTLVQSM-KCELERIEGIEKIICPPFISLYPIKTMLENSSIKLGAQNLFYQEKGAYTGEISPLMLKELC-QYVIIGHSERRAYFGETGQVVNQKIKAALQAGLLPIVCVGEKPEENENGQTRQVLETQLKEALDGL-NLSCIIIAYEPIWAIGTGKAATASEANSAIGYIRRVL 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_BRASO (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain ORS278) GN=tpiA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 68/188 (36.17%), Postives = 95/188 (50.53%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTL-NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 + GNWK NG + + L AE K+ V AQ+C + GA TG++SAEML + VI+GHSERRA ES+ V K A GL I CVGET +QR++G T+ ++ Q + S DN+++AYEPVWAIGTG T +++H+ +R+ L Sbjct: 9 IAGNWKMNGLKASAAEFEAMLAGAAEVTGKADLLVCPPATLLAAFAEKTRGGKAVAVGAQDCHAKASGAHTGDISAEMLADAGASAVIVGHSERRADHGESDVVVHQKAEAAWRAGLVAIVCVGETQQQRDAGLTLEILRGQLTLSLPEGSRADNLIVAYEPVWAIGTGLTPTAGDVEQIHSFIRQLL 196
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_BARHE (Triosephosphate isomerase OS=Bartonella henselae GN=tpiA PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 69/190 (36.32%), Postives = 91/190 (47.89%), Query Frame = 2 Query: 89 FVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHV--------AAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHA 634 F+ GNWK NGT E +L E +LL F + QNC G +TG++SA ML VI+GHSERR + ES+ V KV A GL + CVGETLE+R+S + V+ Q + + +N+++AYEPVWA+GTG AT A EVHA Sbjct: 8 FIAGNWKMNGTGE-------SLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGGENILLGGQNCHFDDYGPYTGDISAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGATAENIIIAYEPVWAVGTGNTATSADVAEVHA 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_NOCFA (Triosephosphate isomerase OS=Nocardia farcinica GN=tpiA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.837e-25 Identity = 79/206 (38.35%), Postives = 104/206 (50.49%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSD---FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 MARK + GNWK N E V+KI L E ++L+ D AQ+ V + GA+TGE+SA ML L +V++GHSERR +E + V K AL GL I C+GE L RE+G+ V EQ + + +S VV+AYEPVWAIGTGKVA+ A AQEV +R L ++ Sbjct: 1 MARKPLIAGNWKMNLNHLEAIALVQKIAFALPEK---YFEKVDVAVIPPFVDIRSVQTLVEGDKLLLTYGAQDVSVHESGAYTGEISASMLAKLGCTFVVVGHSERRQYHHEDDATVLGKAKKALEHGLTPIVCIGEGLNVREAGTHVEYNLEQLRGSLKGLSAEQIAKVVIAYEPVWAIGTGKVASAADAQEVCGAIRAELAELA 203 HSP 2 Score: 23.483 bits (49), Expect = 3.837e-25 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 670 EVAASTRIIYGGFCN 714 EVAA R++YGG N Sbjct: 206 EVAAQVRVLYGGSVN 220 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |