FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_LEIXX (Triosephosphate isomerase OS=Leifsonia xyli subsp. xyli GN=tpiA PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.839e-25 Identity = 71/196 (36.22%), Postives = 97/196 (49.49%), Query Frame = 2 Query: 74 MARKFFVGGNWKCN----GTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVA--AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 M R + GNWK N + V+K+ TL +A + +A Q+ GA+TGE++A L L +VI+GHSERR L NE+++ V K A A+ G+ I CVGET E E AV Q +A I + + V+AYEPVWAIG+G+ ATP QA++V A LR Sbjct: 1 MRRVPLIAGNWKMNLDHLQSIAVVQKLAWTLKDAGHDFGAVEVAVFPPFTDLRSVQTLVAADKLPIAFGGQDVSEHDSGAYTGEIAASFLAALEARYVIIGHSERRTLHNETDEQVAAKTAQAVKNGISPIVCVGETAEDLEKHGASAVPVAQLRAALAGIDSAADFVVAYEPVWAIGSGQAATPEQAEQVAAALR 196 HSP 2 Score: 24.6386 bits (52), Expect = 3.839e-25 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 670 EVAASTRIIYGG 705 EVAA TRI+YGG Sbjct: 206 EVAAKTRILYGG 217
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCS5 (Triosephosphate isomerase OS=Mycoplasma synoviae (strain 53) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 71/200 (35.50%), Postives = 106/200 (53.00%), Query Frame = 2 Query: 83 KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSD---FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMSVLK 673 K + GNWK N T K+ + + L+ + +AAQN + GA+TGEVSA+ML++L++ +VILGHSE+R E+++ V K AL + L I CVGETLE+ +G T VV Q A + + + V++AYEP+WAIGTGKVAT AQ+V +++ +V++ Sbjct: 3 KKLIVGNWKMNSTFSTTKEFLKEFQSLYSLNSKTYNQKATFAVATPFTNLAALKDNDLNLKLAAQNMSFYEKGAYTGEVSADMLLDLNVSYVILGHSEQRQYHAETDENVNKKARLALEKNLTPIVCVGETLEEYLAGKTKEVVKAQLAASLKDL-DVTKVIVAYEPIWAIGTGKVATAQIAQDVCKYIKELTSKQTVVQ 201
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCBP (Triosephosphate isomerase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 78/206 (37.86%), Postives = 105/206 (50.97%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKA-----IAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 M+RK + GNWK N E V+KI +L + + AQ+ GA+TG+VS L L +V++GHSERR NE + V K A AL GL I C+GE L+ RE+G+ VA EQ + +AE+I +VV AYEPVWAIGTG+VA+ A AQEV A +RK L +++ Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIG---SVVTAYEPVWAIGTGRVASAADAQEVCAAIRKELASLA 203
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_ANOFW (Triosephosphate isomerase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 68/191 (35.60%), Postives = 96/191 (50.26%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRK 646 RK + GNWK + T +E + V + ++ ++ + AQN GAFTGE+S L +L + +VI+GHSERR + E+++ V KV A GL I C GETLE+RES T VV Q + E ++ VV+AYEP+WAIGTGK +T A V +R+ Sbjct: 2 RKPIIAGNWKMHKTLKEALQFVEEVKHEVPSNEQVDAVVCAPALFLAHLVEATKGTNVKIGAQNMHFEDQGAFTGEISPVALKDLGVEYVIIGHSERREMFAETDETVNKKVLAAFKHGLVPIVCCGETLEERESNRTNEVVRVQVEKALEGLTEEQVKQVVIAYEPIWAIGTGKSSTAEDANNVCGYIRQ 192
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_THET2 (Triosephosphate isomerase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.250e-25 Identity = 71/193 (36.79%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 R+ V GNWK + T E + + L + L + AQ+ K GA+TGEVSA ML +L + I+GHSERR E++ V +K L G+ I CVGE LE RE G V Q + E + + +V+AYEPVWAIGTGK ATP A+ +H E+RK L Sbjct: 2 RRVLVAGNWKMHKTPSEARVWFAELKRL-LPPLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQEIRKAL 193
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SYNR3 (Triosephosphate isomerase OS=Synechococcus sp. (strain RCC307) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.250e-25 Identity = 66/193 (34.20%), Postives = 99/193 (51.30%), Query Frame = 2 Query: 77 ARKFFVGGNWKCNGTSEEVKKIVST-LNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 +R + GNWK + T + K+ + L + ++L SD +A+QN + GAFTGE+SAEML+ L + + I+GHSE R +ES++ + + + + GL I CVGE+ EQR S T V+ Q + E I +V+AYEP+WAIGTGK +A V +R W+ Sbjct: 5 SRPVVIAGNWKMHMTCAQAKQYAAAFLPQVANAPKDRSIVLAPPFTAISTLQEALAGSDVQIASQNVHWKDSGAFTGEISAEMLLELGVGYTIVGHSEPRKYFSESDEQINQRARASQAAGLIPILCVGESDEQRSSNETERVIRRQVEQGLEGIDP-SKLVVAYEPIWAIGTGKTCESEEANRVCGLIRNWV 196
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_STRSY (Triosephosphate isomerase OS=Streptococcus suis (strain 05ZYH33) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 M+RK + GNWK N +E + V + S+ VAAQNC+ GAFTGE S ++L + + +V++GHSERR +E+++ + K GL I C GE+LE E+G V V Q A + ++ ++V+AYEP+WAIGTGK AT AQ + +R Sbjct: 1 MSRKPIIAGNWKMNKNPQEAQAFVEAIAGKLPAGDKIEAAIAAPAVDLNALLWFAKDSELKVAAQNCYFEDAGAFTGETSPKVLAEMGVNYVVIGHSERRDYFHETDEDINKKAHAIFRNGLTPIICCGESLETYEAGKAVEFVGAQVSAALKDLTADQVASLVIAYEPIWAIGTGKSATKDDAQNMCKAVR 192
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_STRS2 (Triosephosphate isomerase OS=Streptococcus suis (strain 98HAH33) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 M+RK + GNWK N +E + V + S+ VAAQNC+ GAFTGE S ++L + + +V++GHSERR +E+++ + K GL I C GE+LE E+G V V Q A + ++ ++V+AYEP+WAIGTGK AT AQ + +R Sbjct: 1 MSRKPIIAGNWKMNKNPQEAQAFVEAIAGKLPAGDKIEAAIAAPAVDLNALLWFAKDSELKVAAQNCYFEDAGAFTGETSPKVLAEMGVNYVVIGHSERRDYFHETDEDINKKAHAIFRNGLTPIICCGESLETYEAGKAVEFVGAQVSAALKDLTADQVASLVIAYEPIWAIGTGKSATKDDAQNMCKAVR 192
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SILPO (Triosephosphate isomerase OS=Silicibacter pomeroyi GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 75/193 (38.86%), Postives = 95/193 (49.22%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKI--VSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 R+ GNWK NGT + + ++ + A S +R + Q+C GA TG++SA ML + VILGHSERRA E++ V DK AL GL I C+GETL QRE+G T+ VV Q + VV+AYEPVWAIGTG V T Q EVH LR+ L Sbjct: 2 RRKLAAGNWKMNGTGAALDALEAIAGAHSAAAVDLLICPPATLLYRAAQVAEGSRVR----IGGQDCHAVTAGAHTGDISAMMLADAGASAVILGHSERRADHGETDAQVCDKARAALEAGLIAIICIGETLAQREAGQTLDVVCAQLAGSVPDGIDGTRVVVAYEPVWAIGTGLVPTLEQIAEVHDTLRQQL 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_RALEJ (Triosephosphate isomerase OS=Ralstonia eutropha (strain JMP134) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 65/129 (50.39%), Postives = 78/129 (60.47%), Query Frame = 2 Query: 263 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 AQ+ GAFTGEV+A ML + ++GHSERR ES+ V K AL G+ + CVGETL QRE+G T VV Q +A + +S VVLAYEPVWAIGTGK A+ QAQ VHA LR Sbjct: 60 AQDVSAEARGAFTGEVAASMLGEFGCTYALVGHSERRTYHGESDAVVAAKALRALEFGIIPVICVGETLAQREAGETEVVVGRQLQAALDALSVEQLGRVVLAYEPVWAIGTGKTASSEQAQAVHAFLR 188 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |