FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_BRAJA (Triosephosphate isomerase OS=Bradyrhizobium japonicum GN=tpiA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.051e-24 Identity = 63/187 (33.69%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 + GNWK NG + + LN A V AQ+C + GA TG+++AEML N +I+GHSERRA E + V K A G+ I C+GET QR++G T+ ++ Q S N+V+AYEPVWAIGTG T +++H +R++L Sbjct: 9 IAGNWKMNGLKASAAEFDAMLNGAADVATKADLLVCPPATLIAAFADKARGKKVAVGAQDCHPKASGAHTGDIAAEMLANAGATAIIVGHSERRADHGEGDALVRQKAEAAWRAGVTAIVCIGETQAQRDAGQTLDILRGQLDGSLPDGSTAANLVVAYEPVWAIGTGLTPTVQDVEQIHGFIREFL 195
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_BACSK (Triosephosphate isomerase OS=Bacillus clausii (strain KSM-K16) GN=tpiA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.051e-24 Identity = 67/191 (35.08%), Postives = 95/191 (49.74%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRK 646 RK + GNWK N T E V + +++ ++ + AQ GAFTGE+S + L ++ + +VI+GHSERR + E+++ V KV A + L I C GET E+RE+G AVV EQ + +S V+AYEP+WAIGTGK AT A E A +R+ Sbjct: 2 RKPIIAGNWKMNKTIGEAVDFVEAVKANVPAQATVDSVVCAPALFLDRLLQAVKGTELKIGAQTMHFEDNGAFTGEISPKALSDMGVHYVIIGHSERREMFAETDETVNKKVHAAFAHHLVPIMCCGETAEEREAGKMEAVVKEQVENGLAGLSEEQVKQTVIAYEPIWAIGTGKSATEKDANEACAYVRQ 192
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PROMP (Triosephosphate isomerase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=tpiA PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24 Identity = 65/200 (32.50%), Postives = 100/200 (50.00%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDF-HVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMSVL 670 RK + GNWK + T + KK + + D+ ++A+QN GAFT E+S ML+ + + I+GHSE R +ES++ + + +A S GL I CVGETLEQRE G V+ T+ + + + N D N+++AYEP+WAIGTGK + A ++ A +R + V+ Sbjct: 2 RKSVIAGNWKMHMTCADTKKYLEEFLPLIEEIPNDRKIVIAPPFTAISTFSNYTNFDYLNIASQNIHWEDKGAFTAEISPNMLIEHKVKYAIVGHSEPRKYFSESDEQINKRAVFAQSSGLTPIVCVGETLEQRERGEADRVI---TRQVEQGLENTDPSNLIVAYEPIWAIGTGKTCEASDANKICALIRSLIGFSDVI 198
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_ENTFA (Triosephosphate isomerase OS=Enterococcus faecalis GN=tpiA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24 Identity = 65/196 (33.16%), Postives = 96/196 (48.98%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTM 661 RK + GNWK N T E + + A +L S+ +AAQNC+ GAFTGE S + +L + +VI+GHSERR +E+++ + K + G+ I C GETLE E+G T + Q +SN ++V+AYEP+WAIGTGK A A E+ +R ++ + Sbjct: 2 RKPIIAGNWKMNKTLSEAQSFAEAVKNAVPSNDVVDAVIGSPALFLAPLAWNLKDSEVKLAAQNCYWENAGAFTGENSPAAIADLGVDYVIIGHSERREYFHETDEDINKKAKAIFANGMTPIFCCGETLETYEAGKTAEWIEGQITKGLVGLSNEQVASMVIAYEPIWAIGTGKSADANIADEICGVVRSTVEKL 197
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_STRTD (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=tpiA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 63/187 (33.69%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEV 628 M+RK F+ GNWK N EE K V + + S+ VAAQN + GAFTGE S ++L + +V++GHSERR +E+++ + K + G+ I C GE+LE E+G V Q A ++ + V+AYEP+WAIGTGK A+ AQ++ Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSADLVEAGIAVPAVDLTTVIAAAKGSNLKVAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMIPIICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKM 187
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_STRT2 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=tpiA PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 63/187 (33.69%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEV 628 M+RK F+ GNWK N EE K V + + S+ VAAQN + GAFTGE S ++L + +V++GHSERR +E+++ + K + G+ I C GE+LE E+G V Q A ++ + V+AYEP+WAIGTGK A+ AQ++ Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSADLVEAGIAVPAVDLTTVIAAAKGSNLKVAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMIPIICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKM 187
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_STRT1 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=tpiA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 63/187 (33.69%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEV 628 M+RK F+ GNWK N EE K V + + S+ VAAQN + GAFTGE S ++L + +V++GHSERR +E+++ + K + G+ I C GE+LE E+G V Q A ++ + V+AYEP+WAIGTGK A+ AQ++ Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSADLVEAGIAVPAVDLTTVIAAAKGSNLKVAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMIPIICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKM 187
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PROMS (Triosephosphate isomerase OS=Prochlorococcus marinus (strain AS9601) GN=tpiA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKK-------IVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFH---VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRK 646 RK + GNWK + T E K ++ +NE SDF +++QN GAFT E+S +ML+ + + I+GHSE R +ES++ + + +A S GL I CVGETLEQRE G V V+ T+ + + + N D N+++AYEP+WAIGTGK A ++ + +RK Sbjct: 2 RKSVIAGNWKMHMTCAEAKSYLKEFIPLIKDINEDRKVVIAPPFTAISTFSN---------HSDFDYLDISSQNIHWEDQGAFTAEISPKMLLEHGVSYAIVGHSEPRKYFSESDEQINKRAVFAQSSGLTPIVCVGETLEQRERGEAVRVI---TRQVEQGLENTDPSNLIVAYEPIWAIGTGKTCQAEDANKICSLIRK 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_JANSC (Triosephosphate isomerase OS=Jannaschia sp. (strain CCS1) GN=tpiA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 73/193 (37.82%), Postives = 95/193 (49.22%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 MARK GNWK NG ++ + V L EA ++ L D +V Q C GA TG+VSA ML + VILGHSERRA E ++ V +V A+ L I CVGET +R++ T+ VV+ Q + +V+AYEPVWAIGTG+ T Q EVH +R L Sbjct: 1 MARKL-AAGNWKMNGVEADLAE-VDALGEAVAAANCDVLLCPPATLIAPMAKRAGLM-DLYVGGQTCHTAASGAHTGDVSAAMLADAGASHVILGHSERRADHGERSEDVAAQVTAAIDANLIAIICVGETEAERDANVTLNVVSSQLAGSIPTGATPAQIVVAYEPVWAIGTGRTPTLEQIAEVHDHIRSEL 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_ANASP (Triosephosphate isomerase OS=Anabaena sp. (strain PCC 7120) GN=tpiA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 69/199 (34.67%), Postives = 100/199 (50.25%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEA-EXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMSV 667 RK + GNWK T E ++ + A E +SL S + AQN + GA+TGE+S ML + + +VI+GHSERR E+++ V ++ A GL I CVGET +QR+SG T +++ Q + + + N D N+V+AYEP+WAIGTG +A V +R LK V Sbjct: 2 RKIVIAGNWKMFKTQAESQEFLKEFLPALEETPQEREVLLCVPFTDLAILSQSLHGSLVQLGAQNVHWAENGAYTGEISGPMLTEIGVRYVIVGHSERRQFFGETDETVNLRLQAAQKYGLTPILCVGETKQQRDSGETESLIVSQ---LDKDLINVDQTNLVIAYEPIWAIGTGDTCETTEANRVIGLIRSQLKNSDV 197 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |