FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SACEN (Triosephosphate isomerase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tpiA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.598e-23 Identity = 79/199 (39.70%), Postives = 99/199 (49.75%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSD---FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE--KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 MAR+ + GNWK N E V+KI +L E ++L+ D AQ+ + GA+TGEVS ML L +V++GHSERR E+++ V KV L G+ I CVGE LE RE+G V Q + K VV+AYEPVWAIGTGKVAT A AQEV A LR Sbjct: 1 MARQPLIAGNWKMNLNHLEAIALVQKIAFSLPEK---YFAKVEVAVIPPFTDIRSVQTLIDGDKLLLKHGAQDVSEHESGAYTGEVSGPMLAKLGCSYVVVGHSERREHHAETDEVVNRKVRAVLKHGMSPILCVGEPLEVREAGGHVEHSTTQLINALKGLKTEQIRQVVVAYEPVWAIGTGKVATAADAQEVCAALR 196 HSP 2 Score: 21.1718 bits (43), Expect = 2.598e-23 Identity = 7/17 (41.18%), Postives = 10/17 (58.82%), Query Frame = 1 Query: 655 DNVSAEVAASTRIIYGG 705 D E+A R++YGG Sbjct: 201 DKYGKEIADEVRVLYGG 217
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJA (Triosephosphate isomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=tpiA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 68/196 (34.69%), Postives = 96/196 (48.98%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-----RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 R + GNWK + T E ++ + A +++ S V AQN GAFTGE+S ML L + +VI+GHSERR E+++ V ++A A GL I CVGE+L+QRE G T + + Q I + N+V+AYEP+WAIGTGK A+A V +R+ L Sbjct: 2 RPILIAGNWKMHKTQAEARQFLREFRPALQASSAGVRPQRQIILCVPFTDLAVVVEETRGSGMAVGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESLQQREQGLTESWIVGQLDRALPGI-DLRNLVIAYEPIWAIGTGKTCAAAEANRVIGLIRQHL 196
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PSYWF (Triosephosphate isomerase OS=Psychrobacter sp. (strain PRwf-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 73/208 (35.10%), Postives = 110/208 (52.88%), Query Frame = 2 Query: 83 KFFVGGNWKCNGTS-EEVKKIVSTLNE---AEXXXXXXXXXXXXXXXXXXXXXKSLLR---SDFHVAAQNCWV--RKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNW---------DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 K +V GNWK N TS E+V+ +V+ L E A+ + L S +AAQ+ + GA+TG+VSA+ L ++ + WVI+GHSERR ESN + K+ + +GL VI C+GE+ E+G T V+ E+ + IA+ + N+++AYEPVWAIGTGKV + Q ++H +R+ L Sbjct: 2 KSWVIGNWKLNPTSLEQVQHLVTDLVEGVDAQTRSMDNCHLMLAPSFLHLSPVQQALNANSSTLKLAAQDVSALSAESGAYTGDVSAKQLKDMGVQWVIVGHSERRQYYKESNAVLLKKLLNSAEQGLGVILCIGESESDFEAGHTEQVLDEELQVIADFLQQLKPEQAGYAEQNLIIAYEPVWAIGTGKVPSVEQVTQIHRFIRQQL 209
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHY (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 66/186 (35.48%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 83 KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSL----LRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEV 628 K + GNWK N T E + + + SL L +AAQN GAFTGE+S +ML +L +VI+GHSERR + E ++ + +K+ A L + CVGE+L + E+G T V+ Q AI + + N+ ++AYEP+WAIGTGK AT A A++V Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAI-KSVLNFQKAIIAYEPIWAIGTGKTATAAIAEKV 186
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHJ (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=tpiA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 66/186 (35.48%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 83 KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSL----LRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEV 628 K + GNWK N T E + + + SL L +AAQN GAFTGE+S +ML +L +VI+GHSERR + E ++ + +K+ A L + CVGE+L + E+G T V+ Q AI + + N+ ++AYEP+WAIGTGK AT A A++V Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAI-KSVLNFQKAIIAYEPIWAIGTGKTATAAIAEKV 186
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCH7 (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain 7448) GN=tpiA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 66/186 (35.48%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 83 KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSL----LRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEV 628 K + GNWK N T E + + + SL L +AAQN GAFTGE+S +ML +L +VI+GHSERR + E ++ + +K+ A L + CVGE+L + E+G T V+ Q AI + + N+ ++AYEP+WAIGTGK AT A A++V Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAI-KSVLNFQKAIIAYEPIWAIGTGKTATAAIAEKV 186
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MYCH2 (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain 232) GN=tpiA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 66/186 (35.48%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 83 KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSL----LRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEV 628 K + GNWK N T E + + + SL L +AAQN GAFTGE+S +ML +L +VI+GHSERR + E ++ + +K+ A L + CVGE+L + E+G T V+ Q AI + + N+ ++AYEP+WAIGTGK AT A A++V Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAI-KSVLNFQKAIIAYEPIWAIGTGKTATAAIAEKV 186
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 66/188 (35.11%), Postives = 91/188 (48.40%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTL-NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 + GNWK NG + + L AE K+ V AQ+C + GA TG++SAEML + +I+GHSERRA ES+ V K GL I CVGET +QR++G T+ ++ Q + S N+ +AYEPVWAIGTG T +++HA +R L Sbjct: 9 IAGNWKMNGLKASTAEFEAMLAGAAEVTGKADLLVCPPATLLAGFADKARGTRAVAVGAQDCHAKASGAHTGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLL 196
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIME (Triosephosphate isomerase 1 OS=Rhizobium meliloti GN=tpiA1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 67/188 (35.64%), Postives = 93/188 (49.47%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 V GNWK NGT + +I + + +L S + AQ+C ++ GA TGEVSAEM+ + VI+GHSERR E + V K A L I CVGET E+R++G T+ ++ Q + +N V+AYEPVWAIGTG T + +E HA +R+ L Sbjct: 9 VAGNWKMNGTRASLDQIKAMAEGVKGDLSARVDALICPPATLLYVATALCDDSPLMIGAQDCHQKQSGAHTGEVSAEMVADCFGTHVIVGHSERRTDHGEGDALVRAKTEAAHGADLVAIVCVGETEEERKAGRTLDILKRQLSESLPDQATAENTVIAYEPVWAIGTGLTPTVSDVEEAHAFMRREL 196
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_STRMU (Triosephosphate isomerase OS=Streptococcus mutans GN=tpiA PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 M+RK + GNWK N T+ E ++ + + K + ++ VAAQNC+ GAFTGE S L L + +VI+GHSERR +E++ + K + I C GE+LE E+G T + Q A + +S ++V+AYEP+WAIGTGK A A ++ +R Sbjct: 1 MSRKPIIAGNWKMNKTAAEAREFIDAVKNNIPSNNLVDTVIGSPALFLEGMKKGVKGTELQVAAQNCYWEDFGAFTGETSPAALAALGVDYVIIGHSERRDYFHETDQEINKKAHAIFKHKMTPILCCGESLETYEAGKTAEWIEGQITADLKGLSAEQVSSMVIAYEPIWAIGTGKSADANIADDICGVVR 192 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |