FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.777e-36 Identity = 78/195 (40.00%), Postives = 115/195 (58.97%), Query Frame = 2 Query: 77 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN----WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 649 AR+ F+GGN+KCNG+ + +K V+ + A + +AAQN ++ GA+TGE S EML ++ + VI+GHSERR ++ E+++ K AL +G+ VI CVGETL++R++ T+ V Q +A+ +++ W VV+AYEPVW+IGTG VATP QA+EVH LRKW Sbjct: 3 ARRPFIGGNFKCNGSLDFIKSHVAAI-AAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKW 196 HSP 2 Score: 25.409 bits (54), Expect = 3.777e-36 Identity = 12/21 (57.14%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 655 DNVSAEVAASTRIIYGGFCNG 717 + V AE A RIIYGG NG Sbjct: 199 EKVCAEGAQHIRIIYGGSANG 219
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35 Identity = 94/201 (46.77%), Postives = 117/201 (58.21%), Query Frame = 2 Query: 80 RKFFVGGNWKCN----GTSEEVKKIVSTL-NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTM 661 RK FV GNWK N G +I+ L +EA +S ++ +AAQNC+ GA+TGE+SA ML N +VILGHSERR NE+++ V KV ALS L VI CVGETLEQRESG T +VV Q + + ++ D +VV+AYEPVWAIGTGK ATP QAQEVHA +R +K M Sbjct: 2 RKKFVAGNWKMNKDLLGAVSLATEILQLLGDEAPTCEVAIAPTFLCQQAVFQVIDESAIK----LAAQNCFYEDQGAYTGEISAAMLRNSGCEYVILGHSERRQYFNETDEIVNKKVKNALSVELDVIMCVGETLEQRESGVTKSVVETQVRGGLKDLTAEDMKSVVIAYEPVWAIGTGKTATPEQAQEVHAFIRGIVKDM 198
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CHLP8 (Triosephosphate isomerase OS=Chlorobaculum parvum (strain NCIB 8327) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35 Identity = 82/195 (42.05%), Postives = 109/195 (55.90%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGT-SEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTM 661 R+ V GNWK N T +E ++ + + K++ S +AAQNC GAFTGEVS ML +VILGHSERR L E+N+ V KV AL+ GL+VI CVGETL++RE+G T +V Q +S+ +V+AYEPVWAIGTGK AT QAQ+VHA +R ++ + Sbjct: 2 RRTIVVGNWKMNNTIAESIELATAIAEKVGATKPECEVGIAPTFPALHEVGKTIEWSGVQLAAQNCHYENDGAFTGEVSTRMLAAAGCSYVILGHSERRQLFGETNEIVNRKVKKALAEGLRVILCVGETLDEREAGVTDKIVTAQVVEGLADVSDISTLVIAYEPVWAIGTGKTATKEQAQDVHASIRSTIEKL 196
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4) HSP 1 Score: 146.747 bits (369), Expect = 1.136e-34 Identity = 83/198 (41.92%), Postives = 109/198 (55.05%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTM 661 + RK + GNWK + T E KK VS L + L + + AQN + GAFTGE+S ML + + +VI+GHSERR + E ++F+ KV L +G+ I CVGETLE+RE G T VV +Q + + + VV+AYEPVWAIGTG+VATP QAQEVHA +RK L M Sbjct: 400 ITRKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEM 597
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34 Identity = 81/205 (39.51%), Postives = 113/205 (55.12%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMSVLKLQHQL 688 R+ F+ GNWK + TS E +V L A +L +SD VAAQNC+ GAFTGEVS +L + +VI+GHSERR L ES+ F+ KV + GL I C+GETLE+RE+ T V+ Q + E + + + +V+AYEPVWAIGTGK AT +QAQ+ H+ +R + + K+ Q+ Sbjct: 2 RRPFIAGNWKLHKTSAEAAALVGELKGALSDVVDRDIVVAPVFTSLAAVIATLEKSDISVAAQNCYPENQGAFTGEVSPALLKDAGCRYVIVGHSERRQLFAESDAFINRKVKAVIDAGLSAILCIGETLEEREADKTFDVLERQVRCGLEGLDAAAMEQIVVAYEPVWAIGTGKTATDSQAQQAHSFIRSLVNDIFGSKVAQQV 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.735e-34 Identity = 82/190 (43.16%), Postives = 109/190 (57.37%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 RK V GNWK N T +E + LNEA L+ + V A+NC ++ GA+TGEVSA M+ + +VILGHSERRA E+ + + DKV AL+ GL I C+GE LE+RE+ VVA Q ++ + ++ +VLAYEPVWAIGTGK A+PAQAQE+HA +R Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIR 191 HSP 2 Score: 22.7126 bits (47), Expect = 5.735e-34 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 670 EVAASTRIIYGGFC 711 E+A +T I+YGG C Sbjct: 201 EIADNTSILYGGSC 214
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_BACFN (Triosephosphate isomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.735e-34 Identity = 82/190 (43.16%), Postives = 109/190 (57.37%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 RK V GNWK N T +E + LNEA L+ + V A+NC ++ GA+TGEVSA M+ + +VILGHSERRA E+ + + DKV AL+ GL I C+GE LE+RE+ VVA Q ++ + ++ +VLAYEPVWAIGTGK A+PAQAQE+HA +R Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIR 191 HSP 2 Score: 22.7126 bits (47), Expect = 5.735e-34 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 670 EVAASTRIIYGGFC 711 E+A +T I+YGG C Sbjct: 201 EIADNTSILYGGSC 214
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PROA2 (Triosephosphate isomerase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.366e-34 Identity = 83/189 (43.92%), Postives = 105/189 (55.56%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 RK V GNWK N T E ++ S + + ++ + H+AAQNC GAFTGEVS ML +VI+GHSERR ++N V KV ALS GL VI CVGETL++RE G T VV Q K E +++ ++V+AYEPVWAIGTGK A+ QAQEVHA +R Sbjct: 2 RKKIVVGNWKMNKTIAEAVELSSAIIDQLGEVSASCEVGIAPAFPALSGVHGVISGTGIHLAAQNCHYEDDGAFTGEVSVRMLDEAGCSYVIVGHSERRQYFGDTNPVVNLKVKKALSAGLNVILCVGETLDEREKGITTEVVTCQVKEGLEGVADIGDIVIAYEPVWAIGTGKTASSLQAQEVHASIR 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPB (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain BS1) GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34 Identity = 83/195 (42.56%), Postives = 106/195 (54.36%), Query Frame = 2 Query: 80 RKFFVGGNWKCN-GTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTM 661 RK V GNWK N +E V S L + + + SD + AQNC GA+TGEVS ML +L ++I+GHSERR E+N V ++ AL G++VI C+GETLE+RE+G T A+V Q + I + NVVLAYEPVWAIGTGK ATP QA VHA +R + M Sbjct: 2 RKKIVVGNWKMNKNVAEGVALASSILENLDGGKMACEVGIAPAYPVLSEVGRVIEGSDICLVAQNCHYEDEGAYTGEVSVRMLDSLGCSYIIVGHSERRQYFGETNRTVNLRLKKALEGGMRVILCIGETLEEREAGVTDAIVTAQVREGLADIEDLGNVVLAYEPVWAIGTGKTATPEQADAVHASIRATISDM 196
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_HERAR (Triosephosphate isomerase OS=Herminiimonas arsenicoxydans GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.641e-33 Identity = 87/214 (40.65%), Postives = 115/214 (53.74%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMSVLKLQHQLESSTEVSVM 715 R+ V GNWK NG+ +++ + +AE L S + AQ+ GA+TGEVS ML+ + +VI+GHSERRA E+N+ V K ALS GL I CVGETLEQRE+G T VV Q A+ I+ D +V+AYEPVWAIGTGK ATP AQEVH LR+ L + +++TEV ++ Sbjct: 2 RRKLVAGNWKMNGSLAANALLLAEI-KAEFGNPACDVAVCVPAPYLAQCLSLLSDSTIALGAQDVSSHDSGAYTGEVSTAMLLEFACRYVIVGHSERRAYFGETNELVAQKTVRALSAGLMPIVCVGETLEQREAGQTDEVVGRQIDAVLSSIAENDLAKIVVAYEPVWAIGTGKTATPEMAQEVHVMLRRRLHAKNA-------QAATEVRIL 207 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |