FC930645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_SYNSC (Lysyl-tRNA synthetase OS=Synechococcus sp. (strain CC9605) GN=lysS PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.524e-31 Identity = 75/167 (44.91%), Postives = 104/167 (62.28%), Query Frame = 3 Query: 213 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 704 +R R++K L G PYA + +H +LQ + L GEE + VS GKLAF TL D++G+IQL+ EK L + Q F Q+ VD GD LGVSG+++RT++GELSV V+ + +LTK+L PLPDK+HGL DV+KRYRQRY+D++ P+ Sbjct: 4 LRDTRLEKARTLEELGQGPYALTFSPSHRMAELQVTHADLPKGEERDVS---VSVAGRVMTRRVMGKLAFFTLADETGSIQLFLEKAGLEAQQEGWFKQITSLVDSGDWLGVSGTLRRTDRGELSVKVSDWRMLTKALQPLPDKWHGLADVEKRYRQRYLDLVVSPD 167
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_PROM9 (Lysyl-tRNA synthetase OS=Prochlorococcus marinus (strain MIT 9312) GN=lysS PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.524e-31 Identity = 76/177 (42.94%), Postives = 108/177 (61.02%), Query Frame = 3 Query: 213 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEK---------ERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 716 +R R++K L SKG YA + +H+ L + + +L NG+E E+ VS GK+AF T+ D G IQLY +K ++LLS F+ +K VDIGD +GV G++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +V Sbjct: 4 IREARLQKANSLVSKGFASYAESFSVSHTTKFLIQKFDYLENGQE---EDFSVSLAGRVMAKRVMGKIAFFTISDQEGQIQLYLDKRMINCNLENQKLLS--FEDIKEIVDIGDWIGVYGTIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNV 175
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_PROM2 (Lysyl-tRNA synthetase OS=Prochlorococcus marinus (strain MIT 9215) GN=lysS PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31 Identity = 74/177 (41.81%), Postives = 109/177 (61.58%), Query Frame = 3 Query: 213 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYC---------EKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 716 ++ R++K L SKG YA + +++ + L + + +L NG+E++ VS GK+AF T+ D G IQLY EK++LLS F+ +K VDIGD +GV G++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +V Sbjct: 4 IKEARLQKARSLVSKGFASYAQSFKVSNTTSFLLQEFDYLENGQEADFS---VSVAGRVLAKRVMGKIAFFTISDQEGQIQLYLDKRIINLNLEKQKLLS--FEDIKEIVDIGDWIGVYGTIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNV 175
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_BACST (Lysyl-tRNA synthetase OS=Bacillus stearothermophilus GN=lysS PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31 Identity = 69/168 (41.07%), Postives = 109/168 (64.88%), Query Frame = 3 Query: 201 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 704 D+ VR ++KK+EEL G++P+ +++RTH A +L E+Y L+ EE + V+ GK F ++D +G IQ+Y ++ + Q++ K+ D+GDI+GV G+M +T+ GELS+ V+S+ LTK+L PLP+KYHGL D+++RYRQRY+D+I PE Sbjct: 8 DQLRVRREKLKKIEEL---GVDPFGKRFERTHKAEELFELYGDLSK-EELEEQQIEVAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKIS-DLGDIVGVRGTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPE 170
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_CARHZ (Lysyl-tRNA synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=lysS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.901e-30 Identity = 71/166 (42.77%), Postives = 106/166 (63.86%), Query Frame = 3 Query: 222 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 713 +R++K+ ELR G+EPY K++RTH+A ++ + + L + V GK +F ++D SG IQ+Y + L D + K+F +DIGDI+GV+G + +T+KGE++V ++SF IL KSL PLP+K+HGLTDV+ RYRQRYVD+I PEV + Sbjct: 12 VRLEKLSELRKMGIEPYGGKFERTHTAKEILDNFEQLVDKT--------VKIAGRIMAKRGHGKASFAHIQDMSGKIQIYARQNELGIDAY---KLFEKLDIGDIIGVTGHVFKTQKGEITVWLSSFEILAKSLRPLPEKWHGLTDVELRYRQRYVDLIVNPEVRE 166
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_ENTFA (Lysyl-tRNA synthetase OS=Enterococcus faecalis GN=lysS PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.177e-29 Identity = 66/164 (40.24%), Postives = 102/164 (62.20%), Query Frame = 3 Query: 222 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 713 +R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VS GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V + +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQVMKTNTGEVTVKAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFD 179
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_BACHD (Lysyl-tRNA synthetase OS=Bacillus halodurans GN=lysS PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.149e-29 Identity = 71/165 (43.03%), Postives = 100/165 (60.61%), Query Frame = 3 Query: 219 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 713 A+R +K++ L ++G P+ K++RT +A ++E Y + EE E V GK F ++D +G IQ+Y K+ + +D L +DIGDI+GV G +T+ GELSV V F +LTKSL PLPDKYHGL DV++RYRQRY+D+I PEV D Sbjct: 12 AVRREKLQNLEAEGANPFGGKFERTDTAQSMKEKY-DAKSKEELEEETHEVVLAGRVMTKRGKGKAGFAHIQDLTGQIQIYVRKDAVGDKSYD-LFTSIDIGDIVGVKGVAFKTKVGELSVKVQDFQLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLIVNPEVRD 174
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_STAS1 (Lysyl-tRNA synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=lysS PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.243e-29 Identity = 68/162 (41.98%), Postives = 98/162 (60.49%), Query Frame = 3 Query: 222 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE-ESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 704 +R +K++EL G++P+ K+DRT A L E + + E E HVS GK F ++D SG IQ+Y K+++ DQF + D+GDI+GV G M +T GELSV SF +LTK+L PLPDK+HGL D+++RYRQRY+D+I+ + Sbjct: 11 VRRQKLQELYDLGIDPFGQKFDRTSMATPLHEDWDQFSKEELHEKEEESHVSIAGRLMTKRGKGKAGFAHVQDLSGQIQIYVRKDQVGEDQF-AIWNSADLGDIVGVEGVMFKTNTGELSVKAQSFTLLTKALRPLPDKFHGLQDIEQRYRQRYLDLITNQD 171
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_OCEIH (Lysyl-tRNA synthetase OS=Oceanobacillus iheyensis GN=lysS PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.207e-28 Identity = 68/161 (42.24%), Postives = 97/161 (60.25%), Query Frame = 3 Query: 222 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 704 +R K+ E KGL+P+ K++R+H A L E Y + EE D V+ GK F ++D SG IQLY K+ + D ++ K D+GDI+GV+G M +T GE+SV F +LTKSL PLP+KYHGL D+++RYRQRY+D+I+ P+ Sbjct: 11 VRRDKLAEHMEKGLDPFGGKFERSHQATDLIEKYDSYSK-EELEETTDEVTIAGRLMTKRGKGKAGFAHIQDLSGQIQLYVRKDMIGDDAYEVFKS-ADLGDIVGVTGVMFKTNVGEISVKAKQFQLLTKSLRPLPEKYHGLKDIEQRYRQRYLDLITNPD 169
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_FERNB (Lysyl-tRNA synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=lysS PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.207e-28 Identity = 62/163 (38.04%), Postives = 101/163 (61.96%), Query Frame = 3 Query: 216 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 704 R RIK+++ELR+ G+ PY Y +++TH+ +++ + HL+NGE ++ VS GK AF ++D G IQ Y K++ ++ ++ K V +GDI+GV G + ++ GE+++LV F +L K L P+P+K+HG+ D + YRQRYVDMI+ E Sbjct: 6 REARIKEIDELRNLGINPYPYSYNKTHTTEDIKKQFEHLSNGEVTDKR---VSTAGRIMSIREHGKSAFFHIKDTYGRIQAYIRKDK--TENYEFFKERVTVGDIVGVEGIVFKSNTGEITILVEKFELLVKPLRPMPEKWHGIKDKEVLYRQRYVDMIANDE 163 The following BLAST results are available for this feature:
BLAST of FC930645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930645 ID=FC930645; Name=FC930645; organism=Citrus clementina; type=EST; length=716bpback to top |