FC930655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MEF2C_BOVIN (Myocyte-specific enhancer factor 2C OS=Bos taurus GN=MEF2C PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 366 MGR ++Q+ RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F++ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTD--MDKVLLKYTEY 72
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 366 MGR ++Q+ RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F++ +LF+Y STD M+R+L +Y Y Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTD--MDRVLLKYTEY 72
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16 Identity = 55/157 (35.03%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWT----------------------LEYSKLKARMEVLQRNQ---KHFMGEDLADLSLKELQSVEQQI 543 M R R +++RIE+ RQVTFSKRR GL KKA E++VLCDA+VAL+VFS+ GKL ++++ + M I+++Y + + L + +P+ + LE+SK + E L + GE+L LS++ELQ +E+ + Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSN-MNEIIDKYTTH---SKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNL 153
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 37/70 (52.86%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERY 357 MGR ++ +++I N+ NRQ TF+KR++GL+KKA E+S+LCD E+A+IVFS+ KLF+YS+ M+++L RY Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRD-MDKLLIRY 71
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MEF2B_MOUSE (Myocyte-specific enhancer factor 2B OS=Mus musculus GN=Mef2b PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 38/73 (52.05%), Postives = 60/73 (82.19%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERY 366 MGR ++Q+ RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD ++ALI+F++ +LF+Y++ S M+R+L +Y Y Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCDIALIIFNSAQRLFQYAS-SDMDRVLLKYTEY 72
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 48/139 (34.53%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY--STDSCMERILERYERYCYAE-----RQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQI 543 MGRGR ++KRIEN RQ TF KRR GL KKA E++VLCDA++ L++FS GKL+ + T + +ERYE + + RQ + E+E K+ + ++L++ + +D + ++ L+++E + Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELE----------KVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNL 129
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 41/109 (37.61%), Postives = 68/109 (62.39%), Query Frame = 1 Query: 226 GLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDS-CMERILERYERYCYAERQLQAN--EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQI 543 GLLKKA E+++LCDA++ +I+FS+ GK+FE+S+ M I++RY++ L N + N E +++K ++ LQ +HF GEDL L++ E+ +EQQ+ Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK-------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQL 103
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 151 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY---STDSCMERILERYERYCYAERQLQANEIEPN 411 GR ++++ +++N+ N QVTFSKRRSGL KKA E+ LC AEVA++VFS K+F + + DS ++R + + +Q E N Sbjct: 7 GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRN 96
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 47/147 (31.97%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 145 NMGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY---STDSCMERILERYERYCYAERQLQ---ANEIEPNGNWT-----LEYSKLKA------RMEVLQRNQKHFMGEDLADLSLKELQSVE 534 ++GR ++ + +I+ + +RQVTFSKRR+GL KKA E+ LC AE+ +IVFS K F + S +S ++R + R +QLQ A E N T +E K K R E ++R+ ++ + + ++++ +LQ ++ Sbjct: 61 SIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKESVRRSMINWWEKPVEEMNMVQLQEMK 207 The following BLAST results are available for this feature:
BLAST of FC930655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930655 ID=FC930655; Name=FC930655; organism=Citrus clementina; type=EST; length=697bpback to top |