FC930655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23 Identity = 58/132 (43.94%), Postives = 85/132 (64.39%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQI 543 M R ++Q+K+I+N RQVTFSKRR GL KKA E+SVLCDA+VALI+FS+ GKLF+YS+ S M++ILER + + +L +E YS+L + + GE+L L+++ELQ +E+ + Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSS-MKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSL 131
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 60/139 (43.17%), Postives = 92/139 (66.19%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYC-------YAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQI 543 M RG+ Q+KRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALIVFS +GKL+E+++ S ++ +ERY Y ++ ++ + + +G L ++E L+ ++ +GE L + S++EL S+E ++ Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASAS-TQKTIERYRTYTKENIGNKTVQQDIEQVKADADG--------LAKKLEALETYKRKLLGEKLDECSIEELHSLEVKL 130
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 58/132 (43.94%), Postives = 89/132 (67.42%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQI 543 MGRG++++KRIEN NRQVT+SKRR+G+LKKA EISVLCDA V++I+F++ GK+ E+S+ S ++ IL++Y + R L A + N E +K+K + +Q +H GED+ L+ +EL +E + Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVD-ILDQYHKLT-GRRLLDAK----HENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDAL 126
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 61/180 (33.89%), Postives = 107/180 (59.44%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQ----LQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIXFW-S*THSIKKEPTHASIHFRASEKGQVIERAKQLXLQEGKRK 672 M RG+VQ++RIEN ++RQVTF KRR GLLKKA E+SVLCDA+V +I+FS++GKL E +T+ M ++ERY+ + LQ ++ G + L+ +++LQR + G +++L +L ++E+ + W + K + I F +++G +++ A ++ ++ K + Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFL-----LREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEG-ILKEANEMLQEKVKEQ 174
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 55/134 (41.04%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQ--ANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQI 543 MGRG++ +++I++ +RQVTFSKRR GL+KKA E+++LCDAEV LI+FS KL+++++ S ++ +ER+ E++L A+E++ W E L+ + LQ N + G +L LS+KELQ++E Q+ Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSS-VKSTIERFNTAKMEEQELMNPASEVK---FWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQL 130
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 58/132 (43.94%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQI 543 MGRG++++KRIEN NRQVT+SKRR+G+LKKA EISVLCDA V++I+F++ GK+ E+S+ S ++ IL++Y + R+L + E N E +K+K + +Q +H GED+ L+ +EL +E + Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVD-ILDQYHK--LTGRRLWDAKHE---NLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDAL 126
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 59/134 (44.03%), Postives = 91/134 (67.91%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTL--EYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQI 543 M RG+ ++KRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVAL++FS + KL+E+S+ S + +ERY+R +++ N + + E S L ++E L+ +++ +GE + S++ELQ +E Q+ Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSS-IAATIERYQRRI---KEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQL 130
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22 Identity = 66/183 (36.07%), Postives = 111/183 (60.66%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIXFWS*THSIKKEPTHASIHFRASEKGQVIERAKQLXLQEGKRKGEAIEPK 693 MGRG++++KRIEN NRQVT+SKRR+G++KKA EI+VLCDA+V+LI+F GK+ EY S + + +L+ Y++ + R+L + E N + E ++K + +Q +H GED+ L+ KEL +E+ + T+ + +SI + SE +++ + Q+ +E K+ A+ K Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQK--TSGRRLWDAKHE---NLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGL-----TNGL------SSISAKQSEILRMVRKNDQILEEEHKQLQYALHQK 167
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 51/130 (39.23%), Postives = 86/130 (66.15%), Query Frame = 1 Query: 154 RGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQI 543 R R+ ++RI+N RQVTFSKRR GL KKA E+S+LCDAEV L+VFS GKLF++++ S ME+I++RY + ++ + ++++ G + ++LK + + GE+L L++++LQ +E+ + Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTS-MEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSL 150
BLAST of FC930655 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 52/137 (37.96%), Postives = 89/137 (64.96%), Query Frame = 1 Query: 148 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANE-IEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLAD-LSLKELQSVEQQIXFW 552 M RG+VQL+RIEN ++RQVTF KRR+GLLKKA E+S+LC+A++ +I+FS GKL++ +T ME ++ERY+ + ++ ++P E LK + +LQ+ ++ G + ++++EL ++E+ + W Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDPK----QEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIW 133 The following BLAST results are available for this feature:
BLAST of FC930655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930655 ID=FC930655; Name=FC930655; organism=Citrus clementina; type=EST; length=697bpback to top |