FC930657
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_MESVI (Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma viride GN=pdhB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 51/77 (66.23%), Postives = 61/77 (79.22%), Query Frame = 1 Query: 463 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 LFEAL ++EEM R+ V ++GED+GHYGGSYKVT+ L KYG+ RV+DTPIAENSF G IGAAMTGL +VEGM Sbjct: 6 LFEALNMAIDEEMARNDKVALLGEDIGHYGGSYKVTQNLYAKYGEHRVIDTPIAENSFVGAAIGAAMTGLVTVVEGM 82
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.972e-20 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 454 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 E+ + +AL ++EEM DP V VMGE+VG Y G+YK+TKGL +KYG RV DTPI E FTG+G+GAA GL+P+VE M Sbjct: 35 EMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFM 114
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.848e-19 Identity = 43/80 (53.75%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 454 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 E+ + +A+ L+EE+ RD V +MGE+V Y G+YK+TKGL DKYG R++DTPI E F G+G+GAAM G RPI+E M Sbjct: 28 EVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFM 107
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 463 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 L EALR+ + EEM RD V VMGE+V Y G+YKVT+GL ++G RV+DTPI+E F+G+G+GAAM GLRP++E M Sbjct: 141 LREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFM 217
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 42/80 (52.50%), Postives = 61/80 (76.25%), Query Frame = 1 Query: 454 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 +L + EA+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M Sbjct: 32 QLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFM 111
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 42/80 (52.50%), Postives = 61/80 (76.25%), Query Frame = 1 Query: 454 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 +L + EA+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M Sbjct: 32 QLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFM 111
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 454 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 ++ + +AL L+ EM D V +MGE+VG Y G+YKVTKGL +KYG RVLDTPI E FTG+G+GAA GL+P+VE M Sbjct: 25 QMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFM 104
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 41/75 (54.67%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 469 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 EA+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M Sbjct: 37 EAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFM 111
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.413e-18 Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 469 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 EAL + EE+DRD V ++GE+V Y G+YKV+KGL D++G+ RV+DTPI E FTG+ +GAA+ GL+PIVE M Sbjct: 43 EALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFM 117
BLAST of FC930657 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.413e-18 Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 454 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGM 693 ++ + EALR+ ++EEM RD V VMGE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFM 81 The following BLAST results are available for this feature:
BLAST of FC930657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930657 ID=FC930657; Name=FC930657; organism=Citrus clementina; type=EST; length=693bpback to top |