FC930658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA2_VITVI (Glutamine synthetase cytosolic isozyme 2 OS=Vitis vinifera GN=GS1-2 PE=2 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 1.169e-83 Identity = 141/189 (74.60%), Postives = 152/189 (80.42%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 TEK+IAEY+WIGGSGMDLRSKARTL P +DP KLPKWNYDGSST QAPG+DSEVILYPQ +FKDPFRRGNNILVMCD YTPAGEPIPTNKR NAAK+F HP+V+AEE WYGIEQEYTLLQ + WP+ ADKA GRDIV+SHYKACLYAG ISGINGEVMPGQWEFQ P Sbjct: 16 TEKIIAEYIWIGGSGMDLRSKARTLSGPVSDPHKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRHNAAKIFSHPEVLAEETWYGIEQEYTLLQNSVKWPIGWPVGGYPGPQGPYYCGIGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGP 204 HSP 2 Score: 30.0314 bits (66), Expect = 1.169e-83 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 688 VGPCVGISSGDQLWM 732 VGP VGIS+GD+LW+ Sbjct: 202 VGPAVGISAGDELWV 216
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA4_MAIZE (Glutamine synthetase root isozyme 4 OS=Zea mays GN=GLN5 PE=2 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 1.784e-83 Identity = 146/206 (70.87%), Postives = 162/206 (78.64%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP---------VWVSLLVI 721 TEK+IAEY+WIGGSGMDLRSKARTLP P TDP+KLPKWNYDGSST QAPG+DSEVILYPQ +FKDPFRRGNNILVMCD YTPAGEPIPTNKR++AAK+F P+V AEEPWYGIEQEYTLLQKD NWPL A+K+ GRDIV++HYKACLYAG ISGINGEVMPGQWEFQ P VWV+ ++ Sbjct: 16 TEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEVAAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYIL 221
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA_NICPL (Glutamine synthetase OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.330e-83 Identity = 150/206 (72.82%), Postives = 161/206 (78.16%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP---------VWVSLLVI 721 TEK+IAEY+WIGGSGMDLRSKARTL P TDP KLPKWNYDGSST QAPG+DSEVILYPQ +FKDPFRRGNNILVMCDAYTPAGEPIPTNKR AAK+F +PDVVAEEPWYGIEQEYTLLQ+DINWPL ADKA GRDIV+SHYKA LYAG ISGINGEVMPGQWEFQ P VWV+ ++ Sbjct: 16 TEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPAKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSNPDVVAEEPWYGIEQEYTLLQRDINWPLGWPIGGFPGPQGPYYCGTGADKAFGRDIVDSHYKAYLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEVWVARYIL 221
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLN11_ORYSJ (Glutamine synthetase cytosolic isozyme 1-1 OS=Oryza sativa subsp. japonica GN=GLN1-1 PE=1 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.330e-83 Identity = 147/206 (71.36%), Postives = 161/206 (78.16%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP---------VWVSLLVI 721 TEK+IAEY+WIGGSGMDLRSKARTL P TDP+KLPKWNYDGSST QAPG+DSEVILYPQ +FKDPFR+GNNILVMCD YTPAGEPIPTNKR NAAK+F P+V +EEPWYGIEQEYTLLQKDINWPL ADK+ GRDIV+SHYKACLYAG ISGINGEVMPGQWEFQ P VWV+ ++ Sbjct: 16 TEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPAGEPIPTNKRHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVARYIL 221
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA3_MAIZE (Glutamine synthetase root isozyme 3 OS=Zea mays GN=GLN4 PE=1 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 3.975e-83 Identity = 146/206 (70.87%), Postives = 161/206 (78.16%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP---------VWVSLLVI 721 TEK+IAEY+WIGGSGMDLRSKARTL P TDP+KLPKWNYDGSST QAPG+DSEVILYPQ +FKDPFRRGNNILVMCD YTPAGEPIPTNKR+NAAK+F P+V AEEPWYGIEQEYTLLQKD NWPL A+K+ GRDIV++HYKACLYAG ISGINGEVMPGQWEFQ P VWV+ ++ Sbjct: 16 TEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYNAAKIFSSPEVAAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYIL 221
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA_LUPLU (Glutamine synthetase nodule isozyme OS=Lupinus luteus PE=3 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 5.757e-83 Identity = 140/189 (74.07%), Postives = 153/189 (80.95%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 TEK+IAEY+W+GGSG+DLRSKARTL P DP+KLPKWNYDGSST QAPG DSEVIL+PQ +FKDPFRRGNNILVMCD YTPAGEPIPTNKR AAK+F HPDVVAEEPW+GIEQEYTLLQKDI+WP+ A+KA GRDIV+SHYKACLYAG ISGIN EVMPGQWEFQ P Sbjct: 16 TEKIIAEYIWVGGSGVDLRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGKDSEVILWPQAIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRHAAAKIFSHPDVVAEEPWFGIEQEYTLLQKDIHWPIGWPLGGFPGPQGPYYCGTGAEKAFGRDIVDSHYKACLYAGINISGINAEVMPGQWEFQVGP 204 HSP 2 Score: 29.6462 bits (65), Expect = 5.757e-83 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 688 VGPCVGISSGDQLWM 732 VGP VGIS+GD+LW+ Sbjct: 202 VGPSVGISAGDELWV 216
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLN12_ARATH (Glutamine synthetase cytosolic isozyme 1-2 OS=Arabidopsis thaliana GN=GLN1-2 PE=1 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 9.795e-83 Identity = 140/189 (74.07%), Postives = 155/189 (82.01%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 +EK+IAEY+W+GGSGMD+RSKARTLP P TDP+KLPKWNYDGSST QAPG DSEVILYPQ +FKDPFRRGNNILVMCDAYTPAGEPIPTNKR AA++F +PDV+AE PWYGIEQEYTLLQKD+NWPL ADK+ GRDIV++HYKA LYAG ISGINGEVMPGQWEFQ P Sbjct: 16 SEKIIAEYIWVGGSGMDMRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGQDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAEIFANPDVIAEVPWYGIEQEYTLLQKDVNWPLGWPIGGFPGPQGPYYCSIGADKSFGRDIVDAHYKASLYAGINISGINGEVMPGQWEFQVGP 204 HSP 2 Score: 26.5646 bits (57), Expect = 9.795e-83 Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 688 VGPCVGISSGDQLWM 732 VGP VGIS+ D++W+ Sbjct: 202 VGPSVGISAADEIWI 216
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA1_PEA (Glutamine synthetase nodule isozyme OS=Pisum sativum GN=GS1 PE=2 SV=2) HSP 1 Score: 304.679 bits (779), Expect = 3.365e-82 Identity = 145/206 (70.39%), Postives = 160/206 (77.67%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP---------VWVSLLVI 721 TEK+IAEY+WIGGSG+DLR KARTLP P TDP++LPKWNYDGSST QAPG DSEVILYPQ +FKDPFRRGN+ILVMCDAY+PAGEPIPTNKR AAKVF HPDVVAEE WYGIEQEYTLLQKDINWPL ADKA GRD+V +HYKACL+AG ISGINGEVMPGQWEFQ P +WV+ ++ Sbjct: 15 TEKIIAEYIWIGGSGLDLRCKARTLPGPVTDPSELPKWNYDGSSTGQAPGQDSEVILYPQAIFKDPFRRGNHILVMCDAYSPAGEPIPTNKRHAAAKVFSHPDVVAEETWYGIEQEYTLLQKDINWPLGWPAGGYPGPQGPYYCSVGADKAFGRDVVEAHYKACLFAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYIL 220
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLN11_ARATH (Glutamine synthetase cytosolic isozyme 1-1 OS=Arabidopsis thaliana GN=GLN1-1 PE=1 SV=2) HSP 1 Score: 303.908 bits (777), Expect = 5.740e-82 Identity = 142/206 (68.93%), Postives = 161/206 (78.16%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP---------VWVSLLVI 721 T+K+IAEY+W+GGSGMD+RSKARTLP P TDP++LPKWNYDGSST QAPG+DSEVILYPQ +FKDPFRRGNNILVMCDAYTPAGEPIPTNKR AAKVF +PDV AE PWYGIEQEYTLLQKD+ WP+ ADK+ GRD+V+SHYKACLYAG ISGINGEVMPGQWEFQ P +WV+ ++ Sbjct: 16 TDKIIAEYIWVGGSGMDMRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKVFSNPDVAAEVPWYGIEQEYTLLQKDVKWPVGWPIGGYPGPQGPYYCGIGADKSFGRDVVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAADEIWVARYIL 221
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA1_LOTJA (Glutamine synthetase cytosolic isozyme OS=Lotus japonicus GN=GLN1 PE=2 SV=2) HSP 1 Score: 302.753 bits (774), Expect = 1.279e-81 Identity = 142/206 (68.93%), Postives = 163/206 (79.13%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP---------VWVSLLVI 721 T+K+IAEY+WIGGSG+D+RSKARTLP P +DP++LPKWNYDGSST QAPG+DSEVILYPQ +F+DPFRRG+NILV+CDAYTPAGEPIPTNKR AAKVF HPDVVAE PWYGIEQEYTLLQK++NWP+ ADKA GRDIV++HYKACLYAG ISGINGEVMPGQWEFQ P VWV+ ++ Sbjct: 16 TDKIIAEYIWIGGSGLDMRSKARTLPGPVSDPSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRRGSNILVICDAYTPAGEPIPTNKRHAAAKVFSHPDVVAEVPWYGIEQEYTLLQKEVNWPVGWPIGGFPGPQGPYYCGIGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPSVGISAGDEVWVARYIL 221 The following BLAST results are available for this feature:
BLAST of FC930658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930658 ID=FC930658; Name=FC930658; organism=Citrus clementina; type=EST; length=732bpback to top |