FC930658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2) HSP 1 Score: 268.855 bits (686), Expect = 1.066e-72 Identity = 122/189 (64.55%), Postives = 147/189 (77.78%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 T+ +IAEY+WIGG+G+D+RSK+RT+ P + P+++PKWNYDGSST QAPG+DSEVILYPQ +FKDPFR GNNILV+CDAYTPAGEPIPTNKR AA++F +P V AE PWYGIEQEYTLLQ ++ WPL ADK+ GRDI ++HYKAC+YAG ISG NGEVMPGQWE+Q P Sbjct: 74 TDSIIAEYIWIGGTGIDVRSKSRTISKPVSHPSEVPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVVCDAYTPAGEPIPTNKRHRAAEIFSNPKVEAEIPWYGIEQEYTLLQTNVKWPLGWPVGGYPGPQGPYYCAAGADKSFGRDISDAHYKACIYAGINISGTNGEVMPGQWEYQVGP 262 HSP 2 Score: 26.1794 bits (56), Expect = 1.066e-72 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 688 VGPCVGISSGDQLW 729 VGP VGI +GD +W Sbjct: 260 VGPSVGIEAGDHIW 273
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.084e-72 Identity = 124/189 (65.61%), Postives = 146/189 (77.25%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 T+++IAEY+WIGGSG+DLRSK+RTL P DP++LPKWNYDGSST QAPG+DSEVILYPQ +F+DPFR GNNILV+CD YTPAGEPIPTNKR AA++F + V E PW+GIEQEYTLLQ ++NWPL A+K+ GRDI ++HYKACLYAG ISG NGEVMPGQWEFQ P Sbjct: 72 TDRIIAEYIWIGGSGIDLRSKSRTLEKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTYTPAGEPIPTNKRARAAEIFSNKKVNEEIPWFGIEQEYTLLQPNVNWPLGWPVGAYPGPQGPYYCGVGAEKSWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGP 260 HSP 2 Score: 25.7942 bits (55), Expect = 3.084e-72 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 688 VGPCVGISSGDQLW 729 VGP VGI +GD +W Sbjct: 258 VGPSVGIEAGDHVW 271
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 4.389e-71 Identity = 121/189 (64.02%), Postives = 145/189 (76.72%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 ++++IAEY+WIGGSG+DLRSK+RT+ P DP++LPKWNYDGSST QAPG+DSEVILYPQ +F+DPFR GNNILV+CD +TPAGEPIPTNKR AA++F + V E PW+GIEQEYTLLQ+++ WPL ADK GRDI ++HYKACLYAG ISG NGEVMPGQWEFQ P Sbjct: 74 SDRIIAEYIWIGGSGIDLRSKSRTIEKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTWTPAGEPIPTNKRAKAAEIFSNKKVSGEVPWFGIEQEYTLLQQNVKWPLGWPVGAFPGPQGPYYCGVGADKIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGP 262 HSP 2 Score: 25.7942 bits (55), Expect = 4.389e-71 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 688 VGPCVGISSGDQLW 729 VGP VGI +GD +W Sbjct: 260 VGPSVGIDAGDHVW 273
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA_PINSY (Glutamine synthetase cytosolic isozyme OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 6.254e-70 Identity = 124/189 (65.61%), Postives = 141/189 (74.60%), Query Frame = 2 Query: 131 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 TEKVIAEY+WIGGSGMD+RSKAR+L P + +LPKWNYDGSST QA G DSEVILYPQ +F+DPFRRG +ILV+CDAY+P G IP+NKR AAK+F V EE WYG+EQEYTLLQKD+ WPL ADKA GRDIV++HYKACLY+G ISGINGEVMPGQWEFQ P Sbjct: 17 TEKVIAEYIWIGGSGMDMRSKARSLSGPVSSVKELPKWNYDGSSTGQAQGHDSEVILYPQAIFRDPFRRGKHILVICDAYSPNGTAIPSNKRAAAAKIFNEKAVSDEETWYGLEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDAHYKACLYSGINISGINGEVMPGQWEFQVGP 205 HSP 2 Score: 26.9498 bits (58), Expect = 6.254e-70 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 688 VGPCVGISSGDQLW 729 VGP VGIS+ D+LW Sbjct: 203 VGPSVGISAADELW 216
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 3.197e-53 Identity = 104/197 (52.79%), Postives = 120/197 (60.91%), Query Frame = 2 Query: 137 KVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTP----------AGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 K+ AEYVWIGGS D+RSK+RTL T P LP WNYDGSST QAPG DSEV L P+++FKDPFR G+NILVMCD Y P A +PIPTN RF A+V EEPW+GIEQEYTLL WPL A A+GRD+ HY+ CL AG ISG+N EV+P QWE+Q P Sbjct: 37 KICAEYVWIGGSMHDVRSKSRTLSTIPTKPEDLPHWNYDGSSTGQAPGHDSEVYLIPRSIFKDPFRGGDNILVMCDCYEPPKVNPDGTLAAPKPIPTNTRFACAEVM--EKAKKEEPWFGIEQEYTLLNAITKWPLGWPKGGYPAPQGPYYCSAGAGVAIGRDVAEVHYRLCLAAGVNISGVNAEVLPSQWEYQVGP 231 HSP 2 Score: 29.261 bits (64), Expect = 3.197e-53 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 688 VGPCVGISSGDQLWM 732 VGPC GI+ GD +WM Sbjct: 229 VGPCEGITMGDHMWM 243
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 9.864e-49 Identity = 98/186 (52.69%), Postives = 111/186 (59.68%), Query Frame = 2 Query: 140 VIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 V A YVWI G+G DLR K RTL P +LP WNYDGSS QA G +S+ LYP ++KDPFRRGNNILVMCD Y G P TNKR +V AEEPW+GIEQEYT L D PL A+K RDIV++HY+ACLYAG +SG N EVMP QWEFQ P Sbjct: 32 VQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVAN--KCAAEEPWFGIEQEYTFLDFD-GHPLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTNAEVMPAQWEFQVGP 214 HSP 2 Score: 30.8018 bits (68), Expect = 9.864e-49 Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 688 VGPCVGISSGDQLWM 732 VGPC GIS GD LWM Sbjct: 212 VGPCEGISIGDDLWM 226
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA_CANGA (Glutamine synthetase OS=Candida glabrata GN=GLN1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.692e-46 Identity = 96/191 (50.26%), Postives = 115/191 (60.21%), Query Frame = 2 Query: 137 KVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVF-GHPDVVAEEPWYGIEQEYTLLQKDIN---WPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 KVIAEYVW+ G+G +LRSKARTL T +LP+WN+DGSSTNQAPG DS++ L P + DPFRRG+NI V+ + + G P N R A K+F H D EE W+GIEQEYTL N WP A K RD++ +HY+ACLYAG ISGIN EVMP QWEFQ P Sbjct: 23 KVIAEYVWVDGTG-NLRSKARTLNKVITSIEQLPEWNFDGSSTNQAPGYDSDIYLKPVAFYPDPFRRGDNITVLAECFNSDGTPNKFNHRHEANKLFQAHKD---EEIWFGIEQEYTLFDMYDNVYAWP----KGGYPAPQGPYYCGVGAGKVYARDVIEAHYRACLYAGINISGINAEVMPSQWEFQVGP 205 HSP 2 Score: 33.113 bits (74), Expect = 5.692e-46 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 688 VGPCVGISSGDQLWM 732 VGPC GIS GDQLWM Sbjct: 203 VGPCEGISMGDQLWM 217
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA_YEAST (Glutamine synthetase OS=Saccharomyces cerevisiae GN=GLN1 PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 1.642e-45 Identity = 95/191 (49.74%), Postives = 117/191 (61.26%), Query Frame = 2 Query: 137 KVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVF-GHPDVVAEEPWYGIEQEYTL--LQKDI-NWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 ++IAEYVWI G+G +LRSK RTL T +LP+WN+DGSSTNQAPG DS++ L P + DPFRRG+NI+V+ Y G P N R AAK+F H D EE W+G+EQEYTL + D+ WP A K RD++ +HY+ACLYAG ISGIN EVMP QWEFQ P Sbjct: 23 RIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHKD---EEIWFGLEQEYTLFDMYDDVYGWP----KGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGP 205 HSP 2 Score: 32.3426 bits (72), Expect = 1.642e-45 Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 688 VGPCVGISSGDQLWM 732 VGPC GI GDQLWM Sbjct: 203 VGPCTGIDMGDQLWM 217
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA_AGABI (Glutamine synthetase OS=Agaricus bisporus GN=glnA PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.739e-45 Identity = 91/188 (48.40%), Postives = 111/188 (59.04%), Query Frame = 2 Query: 134 EKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 +K+ AEYVWI G G LR K T+ TD +L W++DGSSTNQAPG DS+V L P +FKDPFR G+NILV+ + Y G P TN R +A KVF + EPW+G+EQEYTL D + P K RD++ +HY+ACLYAG ISGIN EVMP QWEFQ P Sbjct: 20 DKIQAEYVWIDGDG-GLRCKTTTVSKKVTDIGQLRIWDFDGSSTNQAPGHDSDVYLRPAAIFKDPFRGGDNILVLAETYNNDGTPNRTNHRHHAKKVF--DEAKEHEPWFGLEQEYTLFDAD-DQPYGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGINISGINAEVMPSQWEFQVGP 203 HSP 2 Score: 31.187 bits (69), Expect = 4.739e-45 Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 688 VGPCVGISSGDQLWM 732 VGPC GIS GD LWM Sbjct: 201 VGPCEGISMGDHLWM 215
BLAST of FC930658 vs. ExPASy Swiss-Prot
Match: GLNA_SUIBO (Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.694e-44 Identity = 91/189 (48.15%), Postives = 111/189 (58.73%), Query Frame = 2 Query: 134 EKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEE-PWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKALGRDIVNSHYKACLYAGNYISGINGEVMPGQWEFQWVP 697 +KV AEYVWI G G LRSK T+ TTD +L W++DGSSTNQAPG DS+V L P +FKDPFR G+NILV+ + + G P TN R + KV D+ + PW+G+EQEYTL D P K RD++ +HY+ACLYAG ISGIN EVMP QWEFQ P Sbjct: 20 DKVQAEYVWIDGDG-GLRSKTMTMTKKTTDIGQLRIWDFDGSSTNQAPGGDSDVYLRPAAIFKDPFRGGDNILVLAETFNNDGTPNRTNHRHHTKKVM---DLAKDSVPWFGLEQEYTLFDAD-GTPFGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGVNISGINAEVMPSQWEFQVGP 203 HSP 2 Score: 31.187 bits (69), Expect = 6.694e-44 Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 688 VGPCVGISSGDQLWM 732 VGPC GIS GD LWM Sbjct: 201 VGPCEGISMGDHLWM 215 The following BLAST results are available for this feature:
BLAST of FC930658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930658 ID=FC930658; Name=FC930658; organism=Citrus clementina; type=EST; length=732bpback to top |