FC930666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP5_HUMAN (Actin-related protein 5 OS=Homo sapiens GN=ACTR5 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 62/233 (26.61%), Postives = 111/233 (47.64%), Query Frame = 3 Query: 3 LAGGTGMVKARFA--GDDA---PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL-TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTER--GYSFTTTAEREIVRDMKEKLAYIALDYEQEL 656 L G+ V+A +A G D PR F ++ R R G VG+ S + L+ P + + N + E + ++F + L V+ + +HP++LTEA NP +R+ M++++FE + P + I ++ S Y + +G+++ SG +H +PI EG R++L G L ++L + G+ T R + ++ + +YIA DY +EL Sbjct: 35 LDNGSFQVRAGWACPGQDPGPEPRLQFRAVCARGRGGA----RGASGPQVGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQH-LGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYGIPKVAYGIDSLFSFYHNKPKNSMCSGLIISSGYQCTHVLPILEGRLDAKNCKRINLGGSQAAGYLQRLLQLKYPGHLAAITLSR--MEEILHEHSYIAEDYVEEL 260
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP10_HUMAN (Actin-related protein 10 OS=Homo sapiens GN=ACTR10 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 55/243 (22.63%), Postives = 109/243 (44.86%), Query Frame = 3 Query: 12 GTGMVKARFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAERE------------IVRDMKEKLAYIALDYEQELETSKTSSAVEESYELP 704 G K FAG+ PR + PS++ R A + + ++Y I + ++ +++ H ++ L V P + V++ E+ L P RE +T+++F+ F P++ +A +++L G + +VLD G S +PIYEG + + L L G+ L L L E+ T+ A+ + ++ D+K + +++ D ++ L+ ++ + E P Sbjct: 21 GEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMPKPVRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVIIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTSVAKEQSLPSVMGSVPEGVLEDIKARTCFVS-DLKRGLKIQAAKFNIDGNNERP 240
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP8_ARATH (Actin-related protein 8 OS=Arabidopsis thaliana GN=ARP8 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 54/164 (32.93%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 240 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEESYE 698 T + ++V P P++++ PL + KA+R ++ +F N PA+ QAVL+LYA+ RT+GIV++ G V +PI G + + + LT L + + E SF + VR +KEKL Y+ALDY+ EL + T ++VE S E Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAEL-SKDTQASVEVSGE 340
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP5_MOUSE (Actin-related protein 5 OS=Mus musculus GN=Actr5 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 56/212 (26.42%), Postives = 106/212 (50.00%), Query Frame = 3 Query: 54 PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL-TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTER--GYSFTTTAEREIVRDMKEKLAYIALDYEQELE 659 PR F ++ R R G G G + VG+ S + L+ P + + N + E + ++F + L V+ + +HP++LTEA NP +R+ M++++FE + P + I ++ S Y + ++G+++ SG +H +P+ EG R++L G L ++L + G+ T R + ++ ++ +YIA DY EL+ Sbjct: 57 PRLQFRAVCARGRG-GARGGPGPQ---VGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQH-LGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYRIPKVAYGIDSLFSFYHNVPKNALSSGLIISSGYQCTHILPVLEGRLDAKNCKRINLGGSQAAGYLQRLLQLKYPGHLAAITLSR--MEEILQEHSYIAEDYGAELQ 261
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP5_DROME (Actin-related protein 5 OS=Drosophila melanogaster GN=Arp5 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 39/168 (23.21%), Postives = 82/168 (48.81%), Query Frame = 3 Query: 174 LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL 656 LK P E +++NW+ E+I+ + F + +HP++LTEA NP R++M +++FE + P++ I A+ S + +++ G +H +P+ +G + RL++ G + L +++ + + + + +IA+DY++EL Sbjct: 79 LKSPFERNVITNWNHQEQIFDYIFTKMGFDGQDKIDHPIILTEALANPNFCRQQMNELLFECYGIPSVSYGIDALYSWKHHQQKQKNISDALIISFGYSTTHVIPVLDGKLQLEHVRRLNVGGYHIITYLFRLMQMKYPVHLNAITISRMEKLVHEHCHIAVDYKEEL 246
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 43/169 (25.44%), Postives = 85/169 (50.30%), Query Frame = 3 Query: 174 LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL--YASGR---TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL 656 LK P E I++NW+ E+I+ + F ++ E+ +P++LTEA NP R+ M++++FE + PA+ I A+ S Y + R + +++ G +H +P+ G + RL++ G + L+ ++ + + + + +IA+DY +EL Sbjct: 82 LKSPFERNIITNWNHQEQIFDYIF-TKMGFEGEQSIANPIVLTEALANPNFCRQNMSELLFECYGIPAVSYGIDALYSWEHYQNRRKKVSDALIISLGYSTTHVIPVLNGKLQLQHVRRLNVGGYHIITYLLCLMQMKYPVHLNAISISRMEKLVHEHCHIAVDYREEL 249
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP10_MOUSE (Actin-related protein 10 OS=Mus musculus GN=Actr10 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 56/243 (23.05%), Postives = 108/243 (44.44%), Query Frame = 3 Query: 12 GTGMVKARFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAERE------------IVRDMKEKLAYIALDYEQELETSKTSSAVEESYELP 704 G K FAG+ PR + PS++ R A + I ++Y I + ++ +++ H ++ L V P + V++ E+ L P RE +T+++F+ F P++ +A +++L G + +VLD G S +PIYEG + + L L G+ L L L E+ T A+ + ++ D+K + +++ D ++ L+ ++ + E P Sbjct: 21 GEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMSKPIKVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPILNCWGALPLGGKALHKELETQLLEQCTVDTGAAKGQSLPSVMGSVPEGVLEDIKVRTCFVS-DLKRGLQIQAAKFNIDGNNERP 240
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP6_SCHPO (Actin-like protein arp6 OS=Schizosaccharomyces pombe GN=arp6 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 60/255 (23.53%), Postives = 111/255 (43.53%), Query Frame = 3 Query: 3 LAGGTGMVKARFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEH--GIVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG--------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET--SKTSSAVEESYELPD 707 L G +KA FAG P+ + R + + ++G+E + TL++ H G + +W +W N + P ++ +LLT+ + Q++FE F A A L + G T +V+DSG +H +P+ + A+ R+D+ G+ LT+ L ++++ R Y+ E IV ++KE + Y++ ++++++E K S +E Y LPD Sbjct: 10 LDNGAYHIKAGFAGGKVVE--IPNCLTRSKDGNRL--------FLGNELANCNDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPD 252
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP4_CANGA (Actin-related protein 4 OS=Candida glabrata GN=ARP4 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 46/184 (25.00%), Postives = 74/184 (40.22%), Query Frame = 3 Query: 36 FAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD-------AYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTER 563 +AG D P+++ PS G + + R +K +E+G V +WD + W NEL + P +LTE N K NR K +I+ E A Y+ + +A+GR +++D G ++ P+ +G +L + AGR L L L R Sbjct: 30 YAGTDCPQSILPSSFGEIHEAEESTSEDNTEKTRKTRKVFSEQSIPIPRPDYEVKRVVENGQVCDWDSAVEQWSWALRNELHIESNRGIPAMLTEPLWNSKENRSKSLEILLEGMEFEACYLTATSTAVSFATGRPNSLIVDIGHDIASVTPVIDGMSLSKSTRCNHFAGRFLNKLLTDYLKPR 213
BLAST of FC930666 vs. ExPASy Swiss-Prot
Match: ARP9_SCHPO (SWI/SNF and RSC complexes subunit arp9 OS=Schizosaccharomyces pombe GN=arp9 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 55/200 (27.50%), Postives = 89/200 (44.50%), Query Frame = 3 Query: 183 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKE------KLAYIALDYEQELETSK--------TSSAVEESYELPDGQVITIG 728 PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE P +A + ++ LYA G G+V+D G + PI +G + A +L L GR +T +L +L E + ++ + D+ E K + IA E +T+K T++ EE G++I G Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITELFAEQVKCSEIAQVVRDEQDTAKDPVKALTSTNNVEEEDPAEDIGKIIASG 311 The following BLAST results are available for this feature:
BLAST of FC930666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 480
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930666 ID=FC930666; Name=FC930666; organism=Citrus clementina; type=EST; length=729bpback to top |