FC930667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_DICDI (Calreticulin OS=Dictyostelium discoideum GN=crtA PE=1 SV=3) HSP 1 Score: 254.603 bits (649), Expect = 3.962e-67 Identity = 113/229 (49.34%), Postives = 168/229 (73.36%), Query Frame = 3 Query: 45 LKMMIKLLVLFLFFQISVSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKEL-ECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 +++++ L+ L F ++S + F++ FD+ W SRWV+SDW + +GK+G HTAGKW GD + KGIQT DAR YA+SAK P FSNK + LV+QY+++ EQ ++CGG YIKLL + ++Q F G++ YS+MFGPD+CG K+ +HVIL+Y+G+N+ IKKE+ + ETD+LTH YT ++ PD +Y +L+DN+E +G++ DW++LP ++IK KP DW D + IDDP Sbjct: 1 MRLLLCLIFLVFVFNFALSTVHFKDTFDNDWESRWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKNEQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKR-VHVILNYKGKNHLIKKEINKVETDQLTHQYTLVISPDNTYKVLVDNKEIQAGNLADDWELLPSKQIKDPKQSKPVDWVDVKEIDDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.035e-63 Identity = 114/211 (54.03%), Postives = 154/211 (72.99%), Query Frame = 3 Query: 108 FFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQK--KFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 +F+E FD W RW S WK S+G AG FK TAGKW+GD + DKGIQT D++ +AISA + F N + VVQ+S++ EQD++CGG YIK++ A ++ +FGGD PYS+MFGPDICG + +HVIL+Y+G+NY IKK+++ ETD+LTH YT +++PD +Y +LID +E SGS+Y DWD+LPP+ IK A KP DWD+RE I DP Sbjct: 21 YFKETFDGSWADRWTKSSWKVSDGSAGEFKLTAGKWYGDAEADKGIQTGPDSKFFAISAPLATVFDNTGKDTVVQFSVKHEQDLDCGGGYIKVVPATSEKQMGEFGGDTPYSIMFGPDICGYSTRKVHVILTYKGKNYLIKKDIKAETDQLTHVYTLVIKPDNTYQVLIDLKEVASGSLYEDWDMLPPKTIKDPKASKPEDWDEREEIADP 231
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.127e-60 Identity = 112/230 (48.70%), Postives = 153/230 (66.52%), Query Frame = 3 Query: 45 LKMMIKLLVLFLFFQISVSEIFFEERF-DDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDP-DDKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 +K ++ ++V L ++FFEE+F DD W S WV S+ E G FK TAGK+ DP DDKG++T DAR YA+S K FSN+ + LVVQ++++ EQDI+CGG Y+K+ + QK G+ PY +MFGPDICG K +HVI SY+G+N+ IKK++ C+ D TH YT I++PD +Y +LIDN + +SG + DWD LP +KIK AKKP DWDD+ I DP Sbjct: 1 MKAVVLVVVSLLALSSINCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPNKKIKDPEAKKPEDWDDKPTIPDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_MOUSE (Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.362e-58 Identity = 112/229 (48.91%), Postives = 158/229 (69.00%), Query Frame = 3 Query: 51 MMIKLLVLFLFFQISVSEIFFEERFDDG--WRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 + + LL+ L + I+F+E+F DG W +RWV S K GK F ++GK++GD + DKG+QT DAR YA+SAK FSNK +TLVVQ++++ EQ+I+CGG Y+KL + ++QK GD+ Y++MFGPDICG K +HVI +Y+G+N I K++ C+ D+ TH YT I+RPD +Y + IDN + +SGS+ DWD LPP+KIK +A KP DWD+R IDDP Sbjct: 3 LSVPLLLGLLGLAAADPAIYFKEQFLDGDAWTNRWVESKHKSDFGK---FVLSSGKFYGDLEKDKGLQTSQDARFYALSAKFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.391e-58 Identity = 109/229 (47.60%), Postives = 156/229 (68.12%), Query Frame = 3 Query: 51 MMIKLLVLFLFFQISVSEIFFEERF--DDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 + + LL+ L ++ ++F+E+F DGW SRW+ S K GK F ++GK++GD + DKG+QT DAR YA+SA FSNK +TLVVQ++++ EQ+I+CGG Y+KL ++Q GD+ Y++MFGPDICG K +HVI +Y+G+N I K++ C+ D+ TH YT I+RPD +Y + IDN + +SGS+ DWD LPP+KIK +A KP DWD+R IDDP Sbjct: 3 LSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGK---FVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_CRIGR (Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.391e-58 Identity = 110/229 (48.03%), Postives = 157/229 (68.56%), Query Frame = 3 Query: 51 MMIKLLVLFLFFQISVSEIFFEERFDDG--WRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 + + LL+ L + ++F+E+F DG W +RWV S K GK F ++GK++GD + DKG+QT DAR YA+SA+ FSNK +TLVVQ++++ EQ+I+CGG Y+KL ++QK GD+ Y++MFGPDICG K +HVI +Y+G+N I K++ C+ D+ TH YT I+RPD +Y + IDN + +SGS+ DWD LPP+KIK +A KP DWD+R IDDP Sbjct: 3 LSVPLLLGLLGLAAAEPAVYFKEQFLDGDDWTNRWVESKHKSDFGK---FVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGSLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_RAT (Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.735e-58 Identity = 111/229 (48.47%), Postives = 157/229 (68.56%), Query Frame = 3 Query: 51 MMIKLLVLFLFFQISVSEIFFEERFDDG--WRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 + + LL+ L + I+F+E+F DG W +RWV S K GK F ++GK++GD + DKG+QT DAR YA+SA+ FSNK +TLVVQ++++ EQ+I+CGG Y+KL ++QK GD+ Y++MFGPDICG K +HVI +Y+G+N I K++ C+ D+ TH YT I+RPD +Y + IDN + +SGS+ DWD LPP+KIK +A KP DWD+R IDDP Sbjct: 3 LSVPLLLGLLGLAAADPAIYFKEQFLDGDAWTNRWVESKHKSDFGK---FVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_RABIT (Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.782e-58 Identity = 109/227 (48.02%), Postives = 155/227 (68.28%), Query Frame = 3 Query: 57 IKLLVLFLFFQISVSEIFFEERF--DDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 + LL+ L + ++F+E+F DGW RW+ S K GK F ++GK++GD + DKG+QT DAR YA+SA+ FSNK + LVVQ++++ EQ+I+CGG Y+KL A ++QK GD+ Y++MFGPDICG K +HVI +Y+G+N I K++ C+ D+ TH YT I+RPD +Y + IDN + +SGS+ DWD LPP+KIK +A KP DWD+R IDDP Sbjct: 5 VPLLLGLLGLAAAEPVVYFKEQFLDGDGWTERWIESKHKSDFGK---FVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQPLVVQFTVKHEQNIDCGGGYVKLFPAGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 109/229 (47.60%), Postives = 155/229 (67.69%), Query Frame = 3 Query: 51 MMIKLLVLFLFFQISVSEIFFEERF--DDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 + + LL+ L + ++F+E+F DGW SRW+ S K GK F ++GK++GD + DKG+QT DAR YA+SA FSNK +TLVVQ++++ EQ+I+CGG Y+KL ++Q GD+ Y++MFGPDICG K +HVI +Y+G+N I K++ C+ D+ TH YT I+RPD +Y + IDN + +SGS+ DWD LPP+KIK +A KP DWD+R IDDP Sbjct: 3 LSVPLLLGLLGLAAAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGK---FVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 109/229 (47.60%), Postives = 155/229 (67.69%), Query Frame = 3 Query: 51 MMIKLLVLFLFFQISVSEIFFEERF--DDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 + + LL+ L + ++F+E+F DGW SRW+ S K GK F ++GK++GD + DKG+QT DAR YA+SA FSNK +TLVVQ++++ EQ+I+CGG Y+KL ++Q GD+ Y++MFGPDICG K +HVI +Y+G+N I K++ C+ D+ TH YT I+RPD +Y + IDN + +SGS+ DWD LPP+KIK +A KP DWD+R IDDP Sbjct: 3 LSVPLLLGLLGLAAAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGK---FVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDP 228 The following BLAST results are available for this feature:
BLAST of FC930667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930667 ID=FC930667; Name=FC930667; organism=Citrus clementina; type=EST; length=730bpback to top |