FC930667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 109/229 (47.60%), Postives = 155/229 (67.69%), Query Frame = 3 Query: 51 MMIKLLVLFLFFQISVSEIFFEERF--DDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 + + LL+ L + ++F+E+F DGW SRW+ S K GK F ++GK++GD + DKG+QT DAR YA+SA FSNK +TLVVQ++++ EQ+I+CGG Y+KL ++Q GD+ Y++MFGPDICG K +HVI +Y+G+N I K++ C+ D+ TH YT I+RPD +Y + IDN + +SGS+ DWD LPP+KIK +A KP DWD+R IDDP Sbjct: 3 LSVPLLLGLLGLAAAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGK---FVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_BOVIN (Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 2.179e-57 Identity = 109/227 (48.02%), Postives = 155/227 (68.28%), Query Frame = 3 Query: 57 IKLLVLFLFFQISVSEIFFEERF--DDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 + LL+ L + ++F+E+F DGW RW+ S K GK F ++GK++GD + DKG+QT DAR YA+SA+ FSNK +TLVVQ++++ EQ+I+CGG Y+KL A ++Q GD+ Y++MFGPDICG K +HVI +Y+G+N I K++ C+ D+ TH YT I+RP+ +Y + IDN + +SGS+ DWD LPP+KIK +A KP DWDDR IDDP Sbjct: 5 VPLLLGLLGLAAADPTVYFKEQFLDGDGWTERWIESKHKPDFGK---FVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPAGLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPNNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDDRAKIDDP 228
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_ONCVO (Calreticulin OS=Onchocerca volvulus GN=crt-1 PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 3.479e-55 Identity = 106/228 (46.49%), Postives = 154/228 (67.54%), Query Frame = 3 Query: 51 MMIKLLVLFLFFQISVSEIFFEERF-DDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDP-DDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDD 722 M + LLV + F ++I+F+E F DD W RW+ S K GK ++ + GK++GD DKG++T DA+ Y+I AK + FSNK ++LV+Q+S++ EQDI+CGG Y+KL+++ VN + G+ PY +MFGPDICG K +HVI Y+ +N+ IKK++ C+ D TH YT I+ D +Y + ID + +SG + DWD LPP+KIK +AKKP DWD+RE+IDD Sbjct: 1 MQLSLLVGLVCFSAINAKIYFKEDFSDDDWEKRWIKSKHKDDFGK---WEISHGKFYGDAVKDKGLKTTQDAKFYSIGAKFDKSFSNKGKSLVIQFSVKHEQDIDCGGGYVKLMASDVNLEDSHGETPYHIMFGPDICGPGTKKVHVIFHYKDRNHMIKKDIRCKDDVFTHLYTLIVNSDNTYEVQIDGEKAESGELEADWDFLPPKKIKDPDAKKPEDWDEREFIDD 225
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_DROME (Calreticulin OS=Drosophila melanogaster GN=Crc PE=1 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.847e-54 Identity = 104/225 (46.22%), Postives = 146/225 (64.89%), Query Frame = 3 Query: 63 LLVLFLFFQISVSEIFFEERFD-DGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPN 728 ++VL +E++ +E FD + W W+ S K + G F T G ++ D + DKGIQT DAR YA S K FSN+++ LVVQ+S++ EQ+I+CGG Y+KL ++Q G++PY +MFGPDICG K +HVI SY+G+N+ I K++ C+ D THFYT I+RPD +Y +LIDN + +SG++ DWD L P+KIK A KP DWDDR I DP+ Sbjct: 7 VIVLLATVGFISAEVYLKENFDNENWEDTWIYS--KHPGKEFGKFVLTPGTFYNDAEADKGIQTSQDARFYAASRKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYEIMFGPDICGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPTATKPEDWDDRATIPDPD 229
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_CAEEL (Calreticulin OS=Caenorhabditis elegans GN=crt-1 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.570e-54 Identity = 107/226 (47.35%), Postives = 153/226 (67.70%), Query Frame = 3 Query: 57 IKLLVLFLFFQISVSEIFFEERFDDG-WRSRWVISDWKRSEGKAGYFKHTAGKWHG-DPDDKGIQTHTDARHYAISAKIP-EFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDD 722 +K L L + +E++F+E F+D W RWV S K G FK +AGK+ + D+GIQT DA+ Y+ +AK +FSNK +TLV+QY+++ EQ I+CGG Y+K++ A + F G+ PY++MFGPDICG ++ +HVIL+Y+G+N IKKE+ C++D+LTH YT IL D +Y + ID +GS+ DWD+LP +KIK +AKKP DWD+REYIDD Sbjct: 1 MKSLCLLAIVAVVSAEVYFKEEFNDASWEKRWVQSKHKDDFGA---FKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGPTRR-VHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPEDWDEREYIDD 222
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_CAEBR (Calreticulin OS=Caenorhabditis briggsae GN=crt-1 PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.570e-54 Identity = 107/226 (47.35%), Postives = 152/226 (67.26%), Query Frame = 3 Query: 57 IKLLVLFLFFQISVSEIFFEERFDDG-WRSRWVISDWKRSEGKAGYFKHTAGKWHG-DPDDKGIQTHTDARHYAISAKIP-EFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDD 722 +K L L + +E++F+E F+D W RWV S K G FK +AGK+ + D+GIQT DA+ Y+ +AK EFSNK +TLV+QY+++ EQ I+CGG Y+K++ + F G+ PY++MFGPDICG ++ +HVIL+Y+G+N IKKE+ C++D+LTH YT IL D +Y + ID +GS+ DWD+LP +KIK +AKKP DWD+REYIDD Sbjct: 1 MKSLCLLAIVAVVSAEVYFKEEFNDASWEKRWVQSKHKDDFGA---FKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKFDKEFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRGDADLADFHGETPYNVMFGPDICGPTRR-VHVILNYKGENKLIKKEITCKSDELTHLYTLILNADNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPEDWDEREYIDD 222
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_SCHMA (Calreticulin OS=Schistosoma mansoni PE=2 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 3.257e-53 Identity = 103/229 (44.98%), Postives = 153/229 (66.81%), Query Frame = 3 Query: 54 MIKLLVLFLFFQISVS-EIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDP-DDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPN 728 M+ +L+ L + ++ E++F E F + WV S + K G FK AGK DP +D G++T DAR Y I+ KI E FSN+ +T+V+Q++++F++ + CGG YIKLL + ++ KKF G++PY +MFGPDICG K +HVI +Y+G+N+ IKKE+ C+ D TH YT I+ P+ Y +L+DN + + GS+ DWD+LPP+KI N KKP DW D ++IDDP+ Sbjct: 1 MLSILLTLLLSKYALGHEVWFSETFPNESIENWVQSTYNAE--KQGEFKVEAGKSPVDPIEDLGLKTTQDARFYGIARKISEPFSNRGKTMVLQFTVKFDKTVSCGGAYIKLLGSDIDPKKFHGESPYKIMFGPDICGMATKKVHVIFNYKGKNHLIKKEIPCKDDLKTHLYTLIVNPNNKYEVLVDNAKVEEGSLEDDWDMLPPKKIDDPNDKKPDDWVDEQFIDDPD 227
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_EUGGR (Calreticulin OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.199e-51 Identity = 107/223 (47.98%), Postives = 148/223 (66.37%), Query Frame = 3 Query: 66 LVLFLFFQISVSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDP-DDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 L L L Q +S I+++E F+ W +RW S K GK FK T+GK++GD D GIQT DA+ YAIS+ I FSN+ + LV+Q+S++ EQDI+CGG Y+KLL + V+ KF GD PY +MFGPDICG KK +H IL+Y+G+N KKE CETD L+H YT +++ D +Y +L+D +++SG++ DW+IL P+ I KKPADW D + DP Sbjct: 7 LGLLLSSQAVLSTIYYKETFEPDWETRWTHSTAKSDYGK---FKLTSGKFYGDKAKDAGIQTSQDAKFYAISSPIASSFSNEGKDLVLQFSVKHEQDIDCGGGYLKLLPS-VDAAKFTGDTPYHIMFGPDICGATKK-IHFILTYKGKNLLWKKEPRCETDTLSHTYTAVIKADRTYEVLVDQVKKESGTLEEDWEILKPKTIPDPEDKKPADWVDEPDMVDP 224
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR3_MOUSE (Calreticulin-3 OS=Mus musculus GN=Calr3 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.465e-45 Identity = 92/220 (41.82%), Postives = 142/220 (64.55%), Query Frame = 3 Query: 63 LLVLFLFFQISVSEIFFEERFDDG--WRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDRE 710 LL +++++ ++F+E F DG WR+RWV S ++ + G+F+ ++GK++G + DKG+QT ++R YAISA FSNK +TLV+QY+++ EQ ++CGG YIK+ + ++QKK G + Y +MFGPDICG K +HVIL ++ Q + KK + C+ D TH YT ILRPD SY + +D + +SGS+ DW++ RK + + DWD E Sbjct: 7 LLWAICVLRVALATVYFQEEFLDGERWRNRWVQST---NDSQFGHFRVSSGKFYGHKEKDKGLQTTQNSRFYAISASFKPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVFPSDLDQKKMNGKSQYYIMFGPDICGFDIKKVHVILYFKNQYHENKKPIRCKVDGFTHLYTLILRPDLSYEVKVDGQSIESGSIEYDWNLTSLRKTEKTSLDS-RDWDQVE 222
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR3_BOVIN (Calreticulin-3 OS=Bos taurus GN=CALR3 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.272e-45 Identity = 87/209 (41.63%), Postives = 139/209 (66.51%), Query Frame = 3 Query: 87 QISVSEIFFEERFDDG--WRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWD 701 +++++ ++F+E F DG WR+RWV S ++ + G+F+ ++G ++G + DKG+QT ++R YAISA+ FSNK +TL++QY+++ EQ ++CGG YIKL A V+QK G + Y +MFGPDICG K +HVIL ++ Q + KK + C+ D TH YT +LRPD +Y + ID + +SGS+ DW + +K++ +A+ WD Sbjct: 15 RVALATVYFQEEFLDGERWRNRWVHST---NDSQFGHFRLSSGNFYGHKEKDKGLQTTQNSRFYAISARFKPFSNKGKTLIIQYTVKHEQKMDCGGGYIKLFPADVDQKNLNGKSQYYIMFGPDICGFDIKTVHVILHFKNQYHANKKSIRCKVDSFTHLYTLVLRPDLTYEVKIDGQSIESGSIEYDWQLTSLKKMEKASAEAEG-WD 219 The following BLAST results are available for this feature:
BLAST of FC930667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930667 ID=FC930667; Name=FC930667; organism=Citrus clementina; type=EST; length=730bpback to top |