FC930667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR3_HUMAN (Calreticulin-3 OS=Homo sapiens GN=CALR3 PE=1 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.371e-43 Identity = 86/209 (41.15%), Postives = 138/209 (66.03%), Query Frame = 3 Query: 87 QISVSEIFFEERFDDG--WRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWD 701 +++++ ++F+E F DG WR+RW+ S ++ + G+F+ ++GK++G + DKG+QT + R YAISA+ FSNK +TLV+QY+++ EQ ++CGG YIK+ A ++QK G + Y +MFGPDICG K +HVIL ++ + + KK + C+ D TH YT ILRPD SY + ID + +SGS+ DW++ + K + + DW+ Sbjct: 15 RVALATVYFQEEFLDGEHWRNRWLQST---NDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARFKPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVFPADIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILHFKNKYHENKKLIRCKVDGFTHLYTLILRPDLSYDVKIDGQSIESGSIEYDWNLTSLK--KETSPAESKDWE 218
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_RAT (Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33 Identity = 87/236 (36.86%), Postives = 128/236 (54.24%), Query Frame = 3 Query: 90 ISVSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-------PDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLS--AYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECE----------TDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDDPN 728 + E++F + FD G S W++S K+ + K+ GKW D P DKG+ + A+H+AISAK+ + F + L+VQY + F+ IECGG Y+KLLS + +N +F PY++MFGPD CG K LH I ++ + +E + TDK TH YT IL PD S+ IL+D +SG++ D + P R+I+ +KP DWD+R I DP+ Sbjct: 65 VPTGEVYFADSFDRGSLSGWILSKAKKDDTDDEIAKYD-GKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTSELNLDQFHDKTPYTIMFGPDKCGEDYK-LHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIADPD 298
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_PONAB (Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33 Identity = 88/235 (37.45%), Postives = 126/235 (53.62%), Query Frame = 3 Query: 90 ISVSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-------PDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAY--VNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECE----------TDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDDP 725 + E++F + FD G S W++S K+ + K+ GKW D P DKG+ + A+H+AISAK+ + F + L+VQY + F+ IECGG Y+KLLS +N +F PY++MFGPD CG K LH I ++ I +E + TDK TH YT IL PD S+ IL+D +SG++ D + P R+I+ +KP DWD+R I DP Sbjct: 64 VPTGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYD-GKWEVDEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYK-LHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDP 296
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_MOUSE (Calnexin OS=Mus musculus GN=Canx PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33 Identity = 87/236 (36.86%), Postives = 128/236 (54.24%), Query Frame = 3 Query: 90 ISVSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-------PDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLS--AYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECE----------TDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDDPN 728 + E++F + FD G S W++S K+ + K+ GKW D P DKG+ + A+H+AISAK+ + F + L+VQY + F+ IECGG Y+KLLS A ++ +F PY++MFGPD CG K LH I ++ + +E + TDK TH YT IL PD S+ IL+D +SG++ D + P R+I+ +KP DWD+R I DP+ Sbjct: 65 VPTGEVYFADSFDRGSLSGWILSKAKKDDTDDEIAKYD-GKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTAELSLDQFHDKTPYTIMFGPDKCGEDYK-LHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIADPD 298
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_CANFA (Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33 Identity = 87/236 (36.86%), Postives = 127/236 (53.81%), Query Frame = 3 Query: 90 ISVSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-------PDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAY--VNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECE----------TDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDDPN 728 + E++F + FD G S W++S K+ + K+ GKW D P DKG+ + A+H+AISAK+ + F + L+VQY + F+ IECGG Y+KLLS +N +F PY++MFGPD CG K LH I ++ + +E + TDK TH YT IL PD S+ IL+D +SG++ D + P R+I+ +KP DWD+R I DP+ Sbjct: 65 VPTGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYD-GKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYK-LHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSIVNSGNLLNDMTPPVNPSREIEDPEDQKPEDWDERPKIPDPD 298
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_HUMAN (Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.385e-33 Identity = 87/235 (37.02%), Postives = 126/235 (53.62%), Query Frame = 3 Query: 90 ISVSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-------PDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAY--VNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECE----------TDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDDP 725 + E++F + FD G S W++S K+ + K+ GKW + P DKG+ + A+H+AISAK+ + F + L+VQY + F+ IECGG Y+KLLS +N +F PY++MFGPD CG K LH I ++ I +E + TDK TH YT IL PD S+ IL+D +SG++ D + P R+I+ +KP DWD+R I DP Sbjct: 64 VPTGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYD-GKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYK-LHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDP 296
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.976e-31 Identity = 90/254 (35.43%), Postives = 127/254 (50.00%), Query Frame = 3 Query: 45 LKMMIKLLVLFLFFQISVS-----------EIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVN---QKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQN------YPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPP----RKIKAVNAKKPADWDDREYIDDPN 728 + M + LL + LFF S S + F E FD+ + RW++SD E G +KH H DD G+ AR YAI ++ E S K+ T+V+Q+ R + +ECGG YIK L + K+F ++PYS+MFGPD CG K +H I ++ + +K +DKLTH YT IL+PD ILID E+ + + D PP + I + KKP DWD+R I DP+ Sbjct: 7 IPMALGLLAMILFFIASSSSHLVRASDDADDAIFYESFDEDFDGRWIVSD---KEDYNGVWKHAKSDGH---DDYGLLVSEQARKYAIVKELAESVSLKDGTVVLQFETRLQNGLECGGAYIKYLRPQESGWKPKEFDNESPYSIMFGPDKCGATNK-VHFIFKHKNPKSGEYVEHHLKYPPSVPSDKLTHVYTAILKPDNELQILIDGEEKKKANFLSSEDFEPPLIPSKTIPDPDDKKPEDWDERAKIPDPS 253
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29 Identity = 76/224 (33.93%), Postives = 117/224 (52.23%), Query Frame = 3 Query: 99 SEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG----YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQN------YPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWD----ILPPRKIKAVNAKKPADWDDREYIDDP 725 S+ F E FD+ + W++S+ E G +KH+ + H DD G+ AR YAI ++ + K+ T+V+QY +R + +ECGG Y++ A K F ++PYS+MFGPD CG K +H IL ++ + +K +DKLTH YT +++PD ILID E+ + + D ++P + I + KKP DWD+R I DP Sbjct: 31 SDAIFYESFDESFEGSWIVSE---KEDYPGEWKHSKSEGH---DDYGLLVSDKARKYAIVKELEKPVELKDGTIVLQYEVRLQNGLECGGAYLKYLRPQDAGWTAKGFDNESPYSIMFGPDKCGATNK-VHFILKHKNPKSGDYVEHHLKFPPSVPSDKLTHVYTAVIKPDNELVILIDGEEKKKANFLSSEDFEPALIPTKTIPDPDDKKPEDWDERAKIPDP 247
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_ASPFU (Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_4G12850 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28 Identity = 83/234 (35.47%), Postives = 119/234 (50.85%), Query Frame = 3 Query: 84 FQISVSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKW--------HGDPDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLL--SAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELE------CETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDDP 725 F + E F E+F W SRW S K+ + K+ G+W +G DKG+ A H+AISAK P+ NK +TLVVQY ++ + + CGG Y+KLL + ++ ++F PY +MFGPD CG K +H I ++ +E T KLT YT I++PD S+ ILID +G++ D+ + P ++I KKPADW D I DP Sbjct: 41 FTPTTIEAPFLEQFTADWDSRWTPSHAKKEDSKSEEDWAYVGEWAVEEPTVLNGMVGDKGLVVKNVAAHHAISAKFPKKIDNKGKTLVVQYEVKPQNSLVCGGAYMKLLQENKKLHAEEFSNATPYVIMFGPDKCGATNK-VHFIFRHKNPKTGEYEEKHMTAPPAARTTKLTTLYTLIVKPDQSFQILIDGEAVKNGTLLEDFAPPVNPEKEIDDPKDKKPADWVDEAKIPDP 273
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.776e-28 Identity = 82/248 (33.06%), Postives = 126/248 (50.81%), Query Frame = 3 Query: 39 RILKMMIKLLVLFLFFQ---ISVSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPEFSN-KNRTLVVQYSIRFEQDIECGG----YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQN------YPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWD----ILPPRKIKAVNAKKPADWDDREYIDDPN 728 R L + LL+ F+ FQ + E FD+ + RW++S ++ G +KH + H +D G+ AR Y I ++ E N K T+V+QY +RF++ +ECGG Y++ A + F ++PYS+MFGPD CG K +H IL ++ + +K DKL+H YT IL+PD IL+D E+ ++ + D ++P + I KKP DWD+R I DPN Sbjct: 4 RQLFSVFLLLLAFVSFQKLCYCDDQTVLYESFDEPFDGRWIVS---KNSDYEGVWKHAKSEGH---EDYGLLVSEKARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCGGTNK-VHFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPN 244 The following BLAST results are available for this feature:
BLAST of FC930667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930667 ID=FC930667; Name=FC930667; organism=Citrus clementina; type=EST; length=730bpback to top |