FC930667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CLGN_MOUSE (Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28 Identity = 77/233 (33.05%), Postives = 126/233 (54.08%), Query Frame = 3 Query: 96 VSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-------PDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLS--AYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECE----------TDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDDP 725 + E++F E FD G + WV+S K+ + + + G+W + P D+G+ + A+H+AI+A + + F ++ L+VQY + F+ I+CGG YIKLL+ + + F Y++MFGPD CG K LH+I ++ + +E + TD+ TH YT ++ PD ++ +LID + + G++ D I PPR+I + KKP +WDDR I DP Sbjct: 57 IGEVYFTETFDSGNLAGWVLSKAKKDDMDSEIAIYD-GRWEIEELKENQVPGDRGLVLKSKAKHHAIAAVLEKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTGDLILENFYDKTSYTIMFGPDKCGEDYK-LHLIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRKTHLYTLVMNPDDTFEVLIDQKVVNQGTLLDDVVPPINPPREIDDPSDKKPEEWDDRAKIPDP 287
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CLGN_BOVIN (Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27 Identity = 80/232 (34.48%), Postives = 124/232 (53.45%), Query Frame = 3 Query: 96 VSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-------PDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAY--VNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECE----------TDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDD 722 V E++F E FD G + WV+S K+ + A + G+W + P D+G+ + A+H+AISA + + F ++ LVVQY + F+ I+CGG YIKLL+ +N + F Y++MFGPD CG K LH I ++ + +E + TD+ TH YT ++ PD ++ +LID + GS+ D I PP++I+ +KP DWD+R I D Sbjct: 53 VGEVYFTETFDSGRLAGWVLSKAKKDDIDAEISIYD-GRWEIEELKENRIPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLVVQYEVNFQDGIDCGGAYIKLLADTDGLNLENFYDKTSYTIMFGPDKCGEDYK-LHFIFRHKHPKTGVFEEKHAKPPDVDLKRFFTDRKTHLYTLVMNPDDTFEVLIDQIVVNKGSLLEDVVPPINPPKEIEDPTDEKPDDWDERAKIPD 282
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CLGN_HUMAN (Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27 Identity = 77/234 (32.91%), Postives = 124/234 (52.99%), Query Frame = 3 Query: 96 VSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-------PDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQ--KKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECE----------TDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDDPN 728 + E++F E FD G + WV+S K+ + + G+W + P D+G+ + A+H+AISA + + F ++ L+VQY + F+ I+CGG YIKLL+ + + F Y +MFGPD CG K LH I ++ + +E + TD+ TH YT ++ PD ++ +L+D + GS+ D I PP++I+ N KKP +WD+R I DP+ Sbjct: 57 IGEVYFAETFDSGRLAGWVLSKAKKDDMDEEISIYD-GRWEIEELKENQVPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTDDLILENFYDKTSYIIMFGPDKCGEDYK-LHFIFRHKHPKTGVFEEKHAKPPDVDLKKFFTDRKTHLYTLVMNPDDTFEVLVDQTVVNKGSLLEDVVPPIKPPKEIEDPNDKKPEEWDERAKIPDPS 288
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.166e-26 Identity = 89/252 (35.32%), Postives = 128/252 (50.79%), Query Frame = 3 Query: 39 RILKMMIKLLVLFLFFQISVS----EIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAK--IPEFSNKNR-TLVVQYSIRFEQDIECGG-YIKLL----SAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQN------YPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPP----RKIKAVNAKKPADWDDREYIDDPN 728 RI+ + LLV L F SVS + E FD+ + RWV+S+ +G +KH + H DD G+ A+ Y I + + E N N T+V+QY RF++ +ECGG Y+K L + +V Q F D+PYS+MFGPD CG K +H IL ++ + +K D L+H YT +L+ D IL+D E+ G++ + D PP + I KKP DWD+R I DPN Sbjct: 4 RIITFVSLLLVALLSFP-SVSYCDDQTILYESFDEPFDGRWVVSEKAEYQG---VWKHEKSEGH---DDYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQG-FDNDSPYSIMFGPDKCGATNK-VHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPN 246
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.523e-26 Identity = 83/254 (32.68%), Postives = 126/254 (49.61%), Query Frame = 3 Query: 45 LKMMIKLLVLFLFFQIS------------VSEIFFEERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPE-FSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVN---QKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQN------YPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWD----ILPPRKIKAVNAKKPADWDDREYIDDP 725 + + + LL + LFF S V + F E FD+ + +RW++S E G +KH+ + H DD G+ AR YAI ++ S K+ T+V+Q+ R + +ECGG YIK L + K F ++ YS+MFGPD CG K +H I ++ + +K +DKL+H YT +L+ D SILID E+ + + D ++P + I + KKP DWD+R I DP Sbjct: 7 IPLAMGLLAVLLFFVASSSSFHLVRASDEVDDAIFYESFDEDFDNRWIVSG---KEEYNGVWKHSKSEGH---DDFGLLVSEPARKYAIVKELDAPVSLKDGTVVLQFETRLQNGLECGGAYIKYLQTQESGWKPKGFDNESGYSIMFGPDRCGATNK-VHFIFRHKNPKTGKHVEHHLKFPPSVPSDKLSHVYTAVLKDDNEVSILIDGEEKKKANFLSSEDFEPALIPSKTIPDPDDKKPEDWDERAKIPDP 253
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_CAEEL (Calnexin homolog OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 75/215 (34.88%), Postives = 109/215 (50.70%), Query Frame = 3 Query: 147 WVISDWKRSEGKAGYFKHTAGKWH-GDPD------DKGIQTHTDARHYAISAKI-PEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLS--AYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQ----------NYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWD--ILPPRKIKAVNAKKPADWDDREYIDD 722 W+ S K+ + + K+ G+W G P D G+ T ARH+AI+AK+ F+ T VVQY I+FE+ ECGG Y+KLLS A + F Y++MFGPD CG K +H+I Y+ N P D TH +T +++P YS+ +D + G+M +D + PP++I KP DWD+RE I+D Sbjct: 75 WIKSLAKKDDVDSDIAKYN-GEWSIGAPTKVSIEGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCGATGK-VHLIFRYKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDWDERENIED 287
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_SCHPO (Calnexin homolog OS=Schizosaccharomyces pombe GN=cal1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19 Identity = 66/222 (29.73%), Postives = 102/222 (45.95%), Query Frame = 3 Query: 117 ERFDDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD--------DKGIQTHTDARHYAISAKIPEFSNK-NRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQK------KHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW--DILPPRKIKAVNAKKPADWDDREYIDDPN 728 E+F W RW+ S KR + G+W + + G+ +A H+AIS + E N+ + LVVQY + E+ + CGG Y+KLL A + Y +MFGPD CG KH + + + + + +T+ YT I++PD ++ + I+ GS++ D+ +LPP +I KPADW D I DPN Sbjct: 44 EQFQGAWSERWIPSHAKRFVNGIEEMSYV-GEWTVEESSGPGALKGEAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLL-AEPTHGEMSNSIDYRIMFGPDKCGVNDRVHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTLIVKPDQTFEVRINGDVVRQGSLFYDFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPN 263
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALR_PIG (Calreticulin (Fragment) OS=Sus scrofa GN=CALR PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15 Identity = 42/88 (47.73%), Postives = 62/88 (70.45%), Query Frame = 3 Query: 105 IFFEERF--DDGWRSRWVISDWKRSEGKAGYFKHTAGKWHGDPD-DKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQDIEC 359 I+F+E+F DGW RW+ S K G+ F ++GK++GD + DKG+QT DAR YA+SA+ FSNK +TLVVQ++++ EQ+I+C Sbjct: 21 IYFKEQFLDGDGWTDRWIESKHKPDFGR---FVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDC 105
BLAST of FC930667 vs. ExPASy Swiss-Prot
Match: CALX_YEAST (Calnexin homolog OS=Saccharomyces cerevisiae GN=CNE1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15 Identity = 72/247 (29.15%), Postives = 110/247 (44.53%), Query Frame = 3 Query: 78 LFFQISVSEIFFEERFDDGWRSR-----WVISDWKRSEGKAGY---FKHTAGKWHGDPDDKGIQTHTDARHYAIS--AKIPEFSNKNRTLVVQYSIRFEQDIECGG-YIKLLSAYVNQKKFGGDAP----YSLMFGPDICGTQKKHLHVILSYQGQ---NYPIKKELECETDKLT-----HFYTFILRPDA-SYSILIDNRE-------RDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDP 725 L ++++E F E F ++ W+ S+ +EG Y ++ + G+ G DKGI T I + P ++ TLVVQY I+ + + CGG +IKL+S ++N + AP L+FGPD C + + ++ + ++ E KLT H YT I+ A S+ ILID + D + + I PP I V+ KP DWDDR I DP Sbjct: 22 LLSNVTLAEDSFWEHFQAYTNTKHLNQEWITSEAVNNEGSKIYGAQWRLSQGRLQGSAWDKGIAVRTGNAAAMIGHLLETPINVSETDTLVVQYEIKLDNSLTCGGAFIKLMSGFMNVEALKHYAPDTEGVELVFGPDYCAPEINGVQFAINKVDKITHESKLRYLQEMPLSKLTDTSQSHLYTLIIDESAQSFQILIDGKTVMVREHIEDKKKVNFEPPITPPLMIPDVSVAKPHDWDDRIRIPDP 268 The following BLAST results are available for this feature:
BLAST of FC930667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930667 ID=FC930667; Name=FC930667; organism=Citrus clementina; type=EST; length=730bpback to top |