FC930674

Overview
NameFC930674
Unique NameFC930674
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37
Identity = 88/216 (40.74%), Postives = 122/216 (56.48%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKT-WTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNV--EAECPKFIAWVKRCLQRETVAKALPDGKEVFEFVSAMRTNL 706
            +V LL    S F  RV+IAL  KGV+Y++ EE+L NKS LLL+ NPVHKK+PV +HN +P  ES +IV+YIDE WK+  P+LPSDPYQRA ARFW  FID K+  ++ K+ +T                L+ LE +L DK FFGG+ FG VD++ +    W   ++      +    + P    W +  L    V + LP    +F +  A   +L
Sbjct:    7 DVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN-PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKARYESL 221          
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 88/216 (40.74%), Postives = 117/216 (54.17%), Query Frame = 2
Query:   62 ANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKA----PLLPSDPYQRAQARFWVDFIDKKMYDSLRKTW------TTKGXXXXXXXXXXXXVLKTLEGQLGD----KPFFGGDNFGYVDLSLIPFYCWFYTYE-TCGKFNVE-AECPKFIAWVKRCLQRETVAKALPD 661
            + E+ LL  W S + IRVR+ L  K + YEY EE+L +KS LLL  NPVHK +PVL+H GRP  ES +IVQYIDEVW   A     ++PSDPY+RA ARFW  ++D    D +R  W      +                L+TLEG  G+    KPFFGGD  G+VD+ L  +  WF   +   G+  ++ A  P   AW +R    +     +PD
Sbjct:    4 SGELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVD----DKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPD 215          
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.660e-34
Identity = 87/217 (40.09%), Postives = 126/217 (58.06%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKM----YDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDL---SLIPFYCWFYTYETCG-KFNVEAECPKFIAWVKRCLQRETVAKALPDGKEVFEFVSAM 694
            EV LL  W S F  RV +AL  KG+ YEY EE L+NKSPLLL +NP+HKK+PVL+HNG+   ES +I++YIDE W    P+LP DPY+R++ARF+   +D+++    + S+ +    KG            ++  LE +L  K +FGG   G++D    SLIPF C    +E  G +   E + P+F  WV+   + E V   +P  +E  E ++ M
Sbjct:    6 EVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQN-PILPQDPYERSKARFFAKLVDEQIMNVGFISMARA-DEKG--REVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIPF-CLERGWEGIGLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEHMNYM 217          
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.106e-32
Identity = 75/152 (49.34%), Postives = 99/152 (65.13%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDL 523
            EV LL    S F  RV  AL  KGVKYE+ EEDL+NKSPLLLQ NP+HKKIPVLIHNG+  CES +I++YIDE ++  + +LP DPY RA ARFW  +++ K   ++ K++ +KG            +LK L+ +  DK  F GD FG+ D+
Sbjct:    3 EVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPS-ILPKDPYDRALARFWAKYVEDK-GAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFADI 152          
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.187e-18
Identity = 71/216 (32.87%), Postives = 103/216 (47.69%), Query Frame = 2
Query:   95 SMFGIRVRIALAEKGVKYEYKEEDL-KNKSPLLLQMNPVHKKIPVLI-HNGRPFCESPIIVQYIDEVWKDKAP------LLPSDPYQRAQARFWVDFIDKKMYD-----SLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNF--GYVDLSLIPFYCWFYTYETCGKFN----VEAEC-PKFIAWVKRCLQRETVAKALPDGKEVFEF 682
            S F  R R+AL  +GV YE  +E L   KS  LL  NPV+ KIPVL+  +GR  CES +IVQYI++V ++         LLP DPY+RA  RFW  FID K +      SL  T   +             + +  + +   + FF G +   G +DL+L    C+      C + +    ++A   P    W +R        + LPD ++V +F
Sbjct:    9 SPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLAL---GCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQF 221          
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 2
Query:   74 VLLDFWPSMFGIRVRIALAEKGVKYEYKEEDL--KNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQAR 346
            VL  +W S    RVRIALA K V YEYK  DL  +     L ++NP   K+P  + +G+   ES  I++Y++E   D  PLLP DP +RA AR
Sbjct:    7 VLYSYWRSSCSWRVRIALALKNVDYEYKTVDLLSEEAKSKLKEINPA-AKVPTFVVDGQVITESLAIIEYLEETHPD-VPLLPKDPIKRAHAR 97          
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: SSPA_SHIFL (Stringent starvation protein A OS=Shigella flexneri GN=sspA PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 43/146 (29.45%), Postives = 68/146 (46.58%), Query Frame = 2
Query:   98 MFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIP 535
            ++  +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+       ES II++Y+DE +    PL+P  P  R ++R ++  I+K  Y  +                     L  +    G KP+F  D F  VD  L P
Sbjct:   20 IYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERF-PHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAP 163          
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: SSPA_ECOLI (Stringent starvation protein A OS=Escherichia coli (strain K12) GN=sspA PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 43/146 (29.45%), Postives = 68/146 (46.58%), Query Frame = 2
Query:   98 MFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIP 535
            ++  +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+       ES II++Y+DE +    PL+P  P  R ++R ++  I+K  Y  +                     L  +    G KP+F  D F  VD  L P
Sbjct:   20 IYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERF-PHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAP 163          
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: SSPA_ECOL6 (Stringent starvation protein A OS=Escherichia coli O6 GN=sspA PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 43/146 (29.45%), Postives = 68/146 (46.58%), Query Frame = 2
Query:   98 MFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIP 535
            ++  +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+       ES II++Y+DE +    PL+P  P  R ++R ++  I+K  Y  +                     L  +    G KP+F  D F  VD  L P
Sbjct:   20 IYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERF-PHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAP 163          
BLAST of FC930674 vs. ExPASy Swiss-Prot
Match: SSPA_ECO57 (Stringent starvation protein A OS=Escherichia coli O157:H7 GN=sspA PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 43/146 (29.45%), Postives = 68/146 (46.58%), Query Frame = 2
Query:   98 MFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIP 535
            ++  +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+       ES II++Y+DE +    PL+P  P  R ++R ++  I+K  Y  +                     L  +    G KP+F  D F  VD  L P
Sbjct:   20 IYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERF-PHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAP 163          
The following BLAST results are available for this feature:
BLAST of FC930674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
GSTX6_SOYBN3.323e-3740.74Probable glutathione S-transferase OS=Glycine max ... [more]
GSTU6_ORYSJ4.062e-3540.74Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTXA_ARATH7.660e-3440.09Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_SOLTU1.106e-3249.34Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX2_MAIZE1.187e-1832.87Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
MAAI_CAEEL4.090e-1144.09Probable maleylacetoacetate isomerase OS=Caenorhab... [more]
SSPA_SHIFL6.977e-1129.45Stringent starvation protein A OS=Shigella flexner... [more]
SSPA_ECOLI6.977e-1129.45Stringent starvation protein A OS=Escherichia coli... [more]
SSPA_ECOL66.977e-1129.45Stringent starvation protein A OS=Escherichia coli... [more]
SSPA_ECO576.977e-1129.45Stringent starvation protein A OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionC34010A10EF PostHarvC1 Citrus clementina cDNA clone C34010A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930674 ID=FC930674; Name=FC930674; organism=Citrus clementina; type=EST; length=735bp
GGTGTTTGTCTTGTCTTTTCATTTATTCACTCTTGACTCTTAGTAAGCTT
CTGTCACAATGGCGAACGAAGTGGTTCTGTTGGATTTCTGGCCCAGCATG
TTTGGGATAAGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCAAGTATGA
GTACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGATGA
ACCCCGTTCACAAGAAGATCCCGGTTCTCATCCACAACGGCAGACCGTTC
TGTGAGTCACCCATCATTGTTCAGTACATTGATGAAGTGTGGAAGGACAA
GGCTCCATTGCTTCCCTCTGATCCCTACCAGAGAGCTCAAGCTAGGTTCT
GGGTAGATTTCATTGACAAGAAGATGTACGATTCTTTGAGGAAGACATGG
ACCACAAAGGGAGAAGAGCAGGAGGCAGCTAAGAAGGAGTTCTTTGAAGT
TCTGAAGACTTTGGAAGGGCAGCTTGGAGACAAGCCATTCTTCGGAGGAG
ACAATTTTGGGTATGTGGATTTAAGTTTGATCCCATTCTATTGTTGGTTT
TACACGTATGAGACATGTGGAAAGTTCAACGTCGAGGCTGAGTGCCCCAA
GTTCATAGCTTGGGTGAAGAGATGCTTGCAGAGGGAGACTGTTGCCAAGG
CACTTCCTGATGGGAAAGAAGTGTTTGAATTTGTTTCAGCGATGAGGACA
AATTTAGGATTGGAGTAGAGAGAAAAGGGACATAC
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