FC930682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930682 vs. ExPASy Swiss-Prot
Match: SODM_STRIN (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus iniae GN=sodA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15 Identity = 52/139 (37.41%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 227 EIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTK 622 E M LHH KHH YV N N A+E+ L + L V+ S ++ A+ NGGGH+NH++FW+ L+P + S AID FGS +A ++ +A GSGW WL + T+ L + +TANQD +++ Sbjct: 5 ETMTLHHDKHHATYVANANAALEKHPEIGENLEELLANVE-SIPADIRQALINNGGGHLNHALFWELLSPEKTEVTKEVAS----AIDQAFGSFDAFKEQFAAAATGRFGSGWAWL-VVTKEGSLEITSTANQDTPISE 137
BLAST of FC930682 vs. ExPASy Swiss-Prot
Match: SODM_STRAI (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus acidominimus GN=sodA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15 Identity = 55/152 (36.18%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 218 ISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 652 I E M LHH KHH YV N N A+E+ L L+ VD + ++ A+ NGGGH+NH++FW+ L+P + L ID FGS +A + + GSGW +L ++ + K L V +TANQD +T+ L P+L + Sbjct: 2 IDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLSDVD-ALPADIRQALINNGGGHLNHALFWELLSPEK----TEISAELAADIDETFGSFDAFKEAFTTAATTRFGSGWAFLVVNPKGK-LEVISTANQDTPITQG--LKPILAL 145
BLAST of FC930682 vs. ExPASy Swiss-Prot
Match: SODM_STRAY (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus alactolyticus GN=sodA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.335e-14 Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 218 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 652 I E M LHH KHH Y+ N N A+E+ + ++ T ++ A+ NGGGH+NH++FW+ L P + EP L AI+ FGS E + GSGW WL ++ E K L V +T NQD +++ P+LG+ Sbjct: 2 IDKETMILHHDKHHATYLANANAALEKHPEIGEDLEFLLSDVTRIPEDIRQALINNGGGHLNHALFWELLTPEKQ---EPTAEVLA-AIEDAFGSFEDFKTAFTQAATTRFGSGWAWLVVNQEGK-LEVMSTGNQDNPISQGKQ--PILGL 145
BLAST of FC930682 vs. ExPASy Swiss-Prot
Match: SODM_HALHI (Superoxide dismutase [Mn] (Fragment) OS=Haloarcula hispanica GN=sod PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.869e-12 Identity = 49/148 (33.11%), Postives = 64/148 (43.24%), Query Frame = 2 Query: 266 YVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYL 709 YV A E L + D + G + NG GH H++FW+N+ P GGGEP L I+ FGS E K E AA GW L D K+L D P+L +DVWEH+YY Y + D++ Sbjct: 2 YVNGLESAEETLAENRESGDFGSSAAAMGNVTHNGCGHYLHTLFWENMDP--NGGGEPEGELLD-RIEEDFGSYEG--WKGEFEAAASAAGGWALLVYDPVAKQLRNVPVDKHDQGALWGSH--PILALDVWEHSYYYDYGPARGDFI 142
BLAST of FC930682 vs. ExPASy Swiss-Prot
Match: SODM2_HALME (Superoxide dismutase [Mn] 2 (Fragment) OS=Halobacterium mediterranei GN=sod2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.122e-11 Identity = 46/141 (32.62%), Postives = 64/141 (45.39%), Query Frame = 2 Query: 266 YVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL-VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQY 685 YV N A E L + + D ++ NG GH H +FW+ + P GGG P L I++ FGS E + E A+ GW L D K+L + + D + A P+L +DVWEH+YY QY Sbjct: 2 YVNGLNAAEETLRENRSSGDMDGSAAAMRSVSHNGCGHYLHHLFWRCMTP--NGGGGEPTGDLRDRIESDFGSYEGW-EAEFREAASWPAGGWALLVYDPVTKQLRNLAVQKHNDGALWSAH---PILALDVWEHSYYFQY 136 The following BLAST results are available for this feature:
BLAST of FC930682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930682 ID=FC930682; Name=FC930682; organism=Citrus clementina; type=EST; length=736bpback to top |