FC930683

Overview
NameFC930683
Unique NameFC930683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 65/179 (36.31%), Postives = 93/179 (51.96%), Query Frame = 1
Query:  151 LATFHEQRKDMTKPKKFF---DGLLKHFNLGSRREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            L  F ++++  ++ + FF    G+L    L +R+EG+ E           K F    L  AT NF+ +  LG+GG G VYKG L DGR +AVK+         +EF NE  +LA++ HRN+V LLG C      +L+YE+V N  L K L     ++ + W+ R  I   IA  L YLH
Sbjct:  370 LYKFIKKQRRSSRMRVFFRRNGGMLLKQQL-ARKEGNVEMS---------KIFSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLH 538          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = 1
Query:  298 FPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            FP++ +  AT  F    KLG G +G VY+GKL +   +A+K+L H  ++   +  NE KLL+ V H N+V LLG C    + +L+YEY+ N +L + L +  R   L W  R  + T  A+ + YLH
Sbjct:  336 FPYKEIEKATDGFSEKQKLGIGAYGTVYRGKLQNDEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRD-RGSGLPWTLRLTVATQTAKAIAYLH 461          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 56/138 (40.58%), Postives = 75/138 (54.35%), Query Frame = 1
Query:  277 AAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKL-SHSSNQGKKEFENEAKL-LARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSR-RNHELNWKQRYDIITGIARGLLYLHE 681
            + R    F    L SAT NF P N LGEG  G VY+ K  DGR +AVKK+ S   + GK E      + L++++H+N+  L+GYC+     +L+YEY  N SL + L  S   +  L W  R  I  G AR + YLHE
Sbjct:  385 STRSAVEFELSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHE 522          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 58/141 (41.13%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  298 FPFEALVSATKNFHP------SNKLGEGGFGPVYKGKLDDGREIAVKKLSH----SSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDSH 690
            F F  L   T NF         NK+GEGGFG VYKG +++ R +AVKKL+     S+ + K++F+ E K++A+ QH N+V LLG+ + G +  L+Y Y+ N SL   L        L+W  R  I  G A GL YLHE+ H
Sbjct:  169 FSFFELKDVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-RTVAVKKLAAMVDISTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWNMRCKIAQGAANGLSYLHENHH 308          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 54/151 (35.76%), Postives = 82/151 (54.30%), Query Frame = 1
Query:  268 EKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDD----------GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRN--HELNWKQRYDIITGIARGLLYLHED 684
            E +++   K F F  L  AT+NF   + +GEGGFG V++G LD+          G  IAVK+L+    QG +E+  E   L ++ H N+V L+GYC    ++LL+YE++   SL+  LF +       L+W  R  +    A+GL +LH D
Sbjct:   39 EILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSD 189          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  289 QKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKL-------SHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAH--GAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHED 684
            ++ F  + ++ ATK FH S  +G G  G VYK  +  G+ IAVKKL       +++SN     F  E   L +++HRN+V L  +C H      LL+YEY+   SL ++L    ++H ++W  R+ I  G A GL YLH D
Sbjct:  804 KERFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELL-HGGKSHSMDWPTRFAIALGAAEGLAYLHHD 943          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 67/183 (36.61%), Postives = 92/183 (50.27%), Query Frame = 1
Query:  151 LATFHEQRKDMTKPKKFFD---GLLKHFNLGSRREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRR-NHELNWKQRYDIITGIARGLLYLHEDS 687
            L  F  +R+   + KKFF    GLL    L +R     E  +EK        F    L  AT+NF  +  LG GG G VYKG L DGR +AVKK         +EF NE  +L+++ HR+VV LLG C      +L+YE++IN +L K + +    ++ + W  R  I   IA  L YLH  +
Sbjct:  399 LRKFLIKRRITKRKKKFFKRNGGLLLLQELNTR-----EGYVEKTRV-----FNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSA 571          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 73/209 (34.93%), Postives = 104/209 (49.76%), Query Frame = 1
Query:   70 TSSFSRHHHLLN--AHKFSQSFFTDLIV*LATFHEQRKDMTKPKKFFD---GLLKHFNLGSRREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHEL-NWKQRYDIITGIARGLLYLH 678
            T  ++ H  L+   +  FS   F   I  L  F  +++ + + KKFF    GLL    L +  EG N +      +RE        L  AT+NF  +  LGEGG G VYKG L DGR +AVKK         +EF NE  +L+++ HRN+V LLG C      +L+YE++ N +L + L     ++ +  W+ R  I   IA  L YLH
Sbjct:  350 TCEYTNHRPLVIGLSTSFSTLVFIGGIYWLYKFIRRQRRLNQKKKFFKRNGGLLLQQQL-TTTEG-NVDSTRVFNSRE--------LEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLH 548          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  235 SRREGDNEEDLEKIAAREQKH-FPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKK--EFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRR--NHELNWKQRYDIITGIARGLLYLH 678
            ++  G    DL+++  R +   F +E L  A   F   + +G+G F  VYKG L DG  +AVK+   SS++ K   EF  E  LL+R+ H ++++LLGYC    E+LL+YE++ + SL   L    +    +L+W +R  I    ARG+ YLH
Sbjct:  478 TKDNGKIRPDLDELQKRRRARVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLH 630          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.452e-19
Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            K F    L +AT  F+ S  LG+GG G VYKG L+DG  +AVKK      +  +EF NE  LL+++ HRNVV +LG C      +L+YE++ N +L   L     +  ++W+ R  I   +A  L YLH
Sbjct:  376 KVFSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLH 504          
The following BLAST results are available for this feature:
BLAST of FC930683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
WAKLD_ARATH2.218e-1936.31Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLO_ARATH2.896e-1937.80Wall-associated receptor kinase-like 14 OS=Arabido... [more]
SRF5_ARATH2.896e-1940.58Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
IRAK4_BOVIN2.896e-1941.13Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
Y3545_ARATH3.783e-1935.76Probable receptor-like protein kinase At3g55450 OS... [more]
Y2317_ARATH3.783e-1936.88Probable leucine-rich repeat receptor-like protein... [more]
WAKLN_ARATH3.783e-1936.61Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLJ_ARATH3.783e-1934.93Wall-associated receptor kinase-like 10 OS=Arabido... [more]
ACR4_ARATH4.940e-1935.95Serine/threonine-protein kinase-like protein ACR4 ... [more]
WAKLG_ARATH6.452e-1939.53Wall-associated receptor kinase-like 8 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC34010B09EF PostHarvC1 Citrus clementina cDNA clone C34010B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930683 ID=FC930683; Name=FC930683; organism=Citrus clementina; type=EST; length=699bp
GACATAACAAGGAAACAGAAGAAAAAGAAACCTCAACTTCATCAAATAGT
CTACAAAATCCAAATATCAACATCCTCCTTCTCCCGTCACCACCATCTCC
TAAACGCTCACAAATTTTCTCAATCTTTTTTCACAGACTTAATTGTTTGA
TTGGCAACTTTCCATGAGCAGAGGAAGGACATGACCAAACCCAAGAAATT
CTTTGATGGTCTTTTGAAACACTTCAATCTTGGTTCTAGAAGAGAGGGTG
ACAACGAAGAAGATTTGGAGAAGATTGCTGCTCGGGAACAGAAGCACTTT
CCATTTGAAGCTTTAGTTTCTGCTACCAAAAATTTTCACCCTTCTAATAA
GCTTGGTGAGGGAGGCTTTGGACCTGTCTACAAGGGGAAGTTGGATGATG
GAAGAGAAATTGCAGTGAAGAAGCTGTCTCATAGTTCGAATCAAGGGAAG
AAGGAATTTGAGAATGAGGCTAAGTTGTTGGCTCGTGTGCAGCACCGGAA
TGTTGTGAATCTGTTGGGGTATTGTGCTCATGGAGCGGAGAAGCTATTGA
TTTATGAGTATGTCATAAACGAGAGTCTGGACAAGGTTCTCTTCAAATCG
AGAAGAAATCATGAGCTTAATTGGAAGCAAAGGTATGACATTATCACTGG
CATTGCTCGGGGATTGCTTTACCTTCATGAGGATTCACACACTGCATCA
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