FC930683

Overview
NameFC930683
Unique NameFC930683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            K F  + +  AT  +  S  LG+GG G VYKG L D   +A+KK     +   ++F NE  +L+++ HRNVV LLG C      LL+YE++ N +L   L  S  +  L W+ R  I   +A  L YLH  +
Sbjct:  395 KIFTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSA 526          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 49/129 (37.98%), Postives = 71/129 (55.04%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            K F    L  AT NF+ +  +G+GG G VYKG L DGR +AVKK +       +EF NE  +L+++ HR+VV LLG C      +L+YE++ N +L + L +   ++   W  R  I   I+    YLH
Sbjct:  440 KLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLH 568          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 49/139 (35.25%), Postives = 80/139 (57.55%), Query Frame = 1
Query:  271 KIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHED 684
            K+ A ++  F  E ++   K     N +G+GG G VY+G + +  ++A+K+L    + +    F  E + L R++HR++V LLGY A+    LL+YEY+ N SL ++L  S+  H L W+ R+ +    A+GL YLH D
Sbjct:  674 KLTAFQKLDFKSEDVLECLKE---ENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGH-LQWETRHRVAVEAAKGLCYLHHD 808          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 1
Query:  298 FPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF-KSRRNHELNWKQRYDIITGIARGLLYLHE 681
            +   +L  AT +F   N +GEG  G VY+ +  +G+ +A+KK+ ++  S Q +  F      ++R++H N+V L GYC    ++LL+YEYV N +LD  L     R+  L W  R  +  G A+ L YLHE
Sbjct:  383 YTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHE 513          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 50/126 (39.68%), Postives = 67/126 (53.17%), Query Frame = 1
Query:  304 FEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHE 681
            +E +V AT  F  SN +G GGFG  YK ++      AVK+LS    QG ++F  E   L  V+H N+V L+GY A   E  LIY Y+   +L   + K R    + WK  + I   +AR L YLHE
Sbjct:  251 YEIIVRATGYFSNSNCIGHGGFGSTYKAEVSPTNVFAVKRLSVGRFQGDQQFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFI-KERSKAAIEWKVLHKIALDVARALSYLHE 375          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 52/152 (34.21%), Postives = 86/152 (56.58%), Query Frame = 1
Query:  235 SRREGDNEEDLEKIAAREQ---KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHE 681
            S R+   +E LE      Q   +HF +E +++AT +F    K+G G +G VYK  L     + VK L  + NQ  K+F+ E ++L++++H ++V LLG C    +  L+YEY+ N SL+  LF+   +  L W +R+ I   +A  L++LH+
Sbjct:  444 SARDTKEKEKLEGTLGSPQLQYQHFAWEEIMAATSSFSEELKIGMGAYGAVYKCNLHHTTAV-VKVLQSAENQLSKQFQQELEILSKIRHPHLVLLLGACPE--QGALVYEYMENGSLEDRLFQVNNSPPLPWFERFRIAWEVAAALVFLHK 592          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 1
Query:  304 FEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHED 684
            F+ ++  T+N +    +G G    VYK  L   R IA+K+L +      +EFE E + +  ++HRN+V+L GY       LL Y+Y+ N SL  +L  S +  +L+W+ R  I  G A+GL YLH D
Sbjct:  638 FDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHD 764          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            K F  E +  AT  ++ S  LG+GG G VYKG L D   +A+KK         ++F NE  +L+++ HRNVV LLG C      LL+YE++ + +L   L  S  +  L W+ R  I   +A  L YLH
Sbjct:  394 KIFTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLH 522          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            K F  E +  AT  +  +  LG+GG G VYKG L D   +A+KK     N   ++F NE  +L+++ HRNVV LLG C      LL+YE++ + +L   L  S  +  L W+ R  +   IA  L YLH  +
Sbjct:  396 KIFTEEGMKEATDGYDENRILGQGGQGTVYKGILPDNSIVAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSA 527          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 48/127 (37.80%), Postives = 78/127 (61.42%), Query Frame = 1
Query:  298 FPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            + +  L   TK+F  S  +G+GGFG VY G L +GR++AVK L       + +F NE   +++  H N+V+LLG+C  G+++ ++YE++ N SLD+ + +++   + +    Y I  GIARGL YLH
Sbjct:  488 YTYAELKKITKSF--SYIIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGSAE-DFINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFMSRNKSLTQ-DVTTLYGIALGIARGLEYLH 610          
The following BLAST results are available for this feature:
BLAST of FC930683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
WAK1_ARATH2.076e-1737.12Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
WAKLL_ARATH2.711e-1737.98Putative wall-associated receptor kinase-like 13 O... [more]
CLV1_ARATH2.711e-1735.25Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
SRF8_ARATH3.540e-1735.88Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
RPK1_ARATH3.540e-1739.68Probable LRR receptor-like serine/threonine-protei... [more]
PUB35_ARATH3.540e-1734.21U-box domain-containing protein 35 OS=Arabidopsis ... [more]
ERL1_ARATH3.540e-1736.22LRR receptor-like serine/threonine-protein kinase ... [more]
WAK5_ARATH4.624e-1737.98Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
WAK4_ARATH4.624e-1737.12Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
Y5393_ARATH6.039e-1737.80Probable receptor-like protein kinase At5g39030 OS... [more]

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Properties
Property NameValue
Genbank descriptionC34010B09EF PostHarvC1 Citrus clementina cDNA clone C34010B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930683 ID=FC930683; Name=FC930683; organism=Citrus clementina; type=EST; length=699bp
GACATAACAAGGAAACAGAAGAAAAAGAAACCTCAACTTCATCAAATAGT
CTACAAAATCCAAATATCAACATCCTCCTTCTCCCGTCACCACCATCTCC
TAAACGCTCACAAATTTTCTCAATCTTTTTTCACAGACTTAATTGTTTGA
TTGGCAACTTTCCATGAGCAGAGGAAGGACATGACCAAACCCAAGAAATT
CTTTGATGGTCTTTTGAAACACTTCAATCTTGGTTCTAGAAGAGAGGGTG
ACAACGAAGAAGATTTGGAGAAGATTGCTGCTCGGGAACAGAAGCACTTT
CCATTTGAAGCTTTAGTTTCTGCTACCAAAAATTTTCACCCTTCTAATAA
GCTTGGTGAGGGAGGCTTTGGACCTGTCTACAAGGGGAAGTTGGATGATG
GAAGAGAAATTGCAGTGAAGAAGCTGTCTCATAGTTCGAATCAAGGGAAG
AAGGAATTTGAGAATGAGGCTAAGTTGTTGGCTCGTGTGCAGCACCGGAA
TGTTGTGAATCTGTTGGGGTATTGTGCTCATGGAGCGGAGAAGCTATTGA
TTTATGAGTATGTCATAAACGAGAGTCTGGACAAGGTTCTCTTCAAATCG
AGAAGAAATCATGAGCTTAATTGGAAGCAAAGGTATGACATTATCACTGG
CATTGCTCGGGGATTGCTTTACCTTCATGAGGATTCACACACTGCATCA
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