FC930683

Overview
NameFC930683
Unique NameFC930683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11
Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 1 
Query:  280 AREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKE--FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSR--RNHELNWKQRYDIITGIARGLLYLHEDS 687
            +R Q  +  E L+ A+        LG G  G  YK  LD+   + VK+L  +      E  FEN  +++  ++H N+V +  Y     E+L+IY+Y  N SL  ++  SR  R   L+W     I   +A+GL Y+H+ S
Sbjct:  380 SRSQGMYTMEQLMRASAEL-----LGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTS 514
The following BLAST results are available for this feature:
BLAST of FC930683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
Y5720_ARATH8.446e-1131.43Probable inactive receptor kinase At5g67200 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC34010B09EF PostHarvC1 Citrus clementina cDNA clone C34010B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930683 ID=FC930683; Name=FC930683; organism=Citrus clementina; type=EST; length=699bp
GACATAACAAGGAAACAGAAGAAAAAGAAACCTCAACTTCATCAAATAGT
CTACAAAATCCAAATATCAACATCCTCCTTCTCCCGTCACCACCATCTCC
TAAACGCTCACAAATTTTCTCAATCTTTTTTCACAGACTTAATTGTTTGA
TTGGCAACTTTCCATGAGCAGAGGAAGGACATGACCAAACCCAAGAAATT
CTTTGATGGTCTTTTGAAACACTTCAATCTTGGTTCTAGAAGAGAGGGTG
ACAACGAAGAAGATTTGGAGAAGATTGCTGCTCGGGAACAGAAGCACTTT
CCATTTGAAGCTTTAGTTTCTGCTACCAAAAATTTTCACCCTTCTAATAA
GCTTGGTGAGGGAGGCTTTGGACCTGTCTACAAGGGGAAGTTGGATGATG
GAAGAGAAATTGCAGTGAAGAAGCTGTCTCATAGTTCGAATCAAGGGAAG
AAGGAATTTGAGAATGAGGCTAAGTTGTTGGCTCGTGTGCAGCACCGGAA
TGTTGTGAATCTGTTGGGGTATTGTGCTCATGGAGCGGAGAAGCTATTGA
TTTATGAGTATGTCATAAACGAGAGTCTGGACAAGGTTCTCTTCAAATCG
AGAAGAAATCATGAGCTTAATTGGAAGCAAAGGTATGACATTATCACTGG
CATTGCTCGGGGATTGCTTTACCTTCATGAGGATTCACACACTGCATCA
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