FC930683

Overview
NameFC930683
Unique NameFC930683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35
Identity = 72/151 (47.68%), Postives = 105/151 (69.54%), Query Frame = 1
Query:  238 RREGDNEEDLE-KIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            R++   +E+ E +  + +  HF FE +  AT +F  +NK+GEGGFG VYKG L DG EIAVK+LS  S QG  EF+ E  L+ ++QH+N+V L G+    +E+LL+YE++ N SLD+ LF   +  +L+W++RY+II G++RGLLYLHE S
Sbjct:  300 RKKKTLKENAENEFESTDSLHFDFETIRVATDDFSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGS 450          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35
Identity = 67/134 (50.00%), Postives = 96/134 (71.64%), Query Frame = 1
Query:  286 EQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            E     +  + +AT  F  +NK+G+GGFG VYKG   +G E+AVK+LS SS QG  EF+NE  ++A++QHRN+V LLG+   G E++L+YEY+ N+SLD  LF   + ++L+W +RY +I GIARG+LYLH+DS
Sbjct:  321 ESLQLDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDS 454          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34
Identity = 72/130 (55.38%), Postives = 90/130 (69.23%), Query Frame = 1
Query:  298 FPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            F    ++ AT  F   NKLG+GGFG VYKG L  G+EIAVK+L+  S QG+ EF+NE  LL R+QHRN+V LLG+C  G E++L+YE+V N SLD  +F   +   L W  RY II G+ARGLLYLHEDS
Sbjct:  328 FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDS 457          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34
Identity = 73/154 (47.40%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  226 NLGSRREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            N+GS    D++             F    +V AT +F   N LG+GGFG VYKG   +G+E+AVK+L+  S QG  EF+NE  LL R+QH+N+V LLG+C  G E++L+YE+V N SLD  +F   +   L W+ R+ II GIARGLLYLHEDS
Sbjct:  319 NVGSAEYSDSDGQF-------MLRFDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDS 465          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.163e-34
Identity = 71/130 (54.62%), Postives = 92/130 (70.77%), Query Frame = 1
Query:  298 FPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            F +  L SAT++F PSNKLGEGGFGPVYKG L+DGR +AVK LS  S QGK +F  E   ++ V HRN+V L G C  G  ++L+YEY+ N SLD+ LF  +  H L+W  RY+I  G+ARGL+YLHE++
Sbjct:  682 FTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLH-LDWSTRYEICLGVARGLVYLHEEA 810          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.163e-34
Identity = 70/148 (47.30%), Postives = 104/148 (70.27%), Query Frame = 1
Query:  268 EKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNH--------ELNWKQRYDIITGIARGLLYLHEDS 687
            + + + +   F F  L +AT  F  +NKLG+GGFG VYKG L +  E+AVK+LS +S QG +EF+NE  ++A++QH+N+V LLG+C    E++L+YE+V N+SL+  LF +++ H        +L+WK+RY+II GI RGLLYLH+DS
Sbjct:  299 DDMTSPQSLQFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDS 446          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 70/150 (46.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query:  238 RREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            RR    +     I       F F+A+  AT  F  SN +G GGFG V+ G L+ G E+A+K+LS +S QG +EF+NE  ++A++ HRN+V LLG+C  G EK+L+YE+V N+SLD  LF   +  +L+W +RY+II GI RG+LYLH+DS
Sbjct:  305 RRRKSYQGSSTDITITHSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVLN-GTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIRGITRGILYLHQDS 453          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 9.274e-34
Identity = 71/134 (52.99%), Postives = 95/134 (70.90%), Query Frame = 1
Query:  286 EQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            E   F  + + +AT NF   NKLG GGFG VYKG L +G EIAVK+LS +S QG+ EF+NE  ++A++QH N+V LLG+   G EKLL+YE+V N+SLD  LF   + ++L+W  R +II GI RG+LYLH+DS
Sbjct:  343 ESVQFDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNKRNQLDWTVRRNIIGGITRGILYLHQDS 476          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33
Identity = 66/134 (49.25%), Postives = 93/134 (69.40%), Query Frame = 1
Query:  286 EQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            E     + A+ +AT +F  +NK+G GGFG VYKG   +G E+AVK+LS +S QG  EF+NE  ++A ++H+N+V +LG+     E++L+YEYV N+SLD  LF   +  +L W QRY II GIARG+LYLH+DS
Sbjct:  320 ESLQLDYRAIQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDS 453          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.284e-32
Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 1
Query:  238 RREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            RR   + E + K       +F +  L  AT +F  +NKLG+GGFG VYKG L DGR+IAVK+L  ++     +F NE  +++ V+H+N+V LLG    G E LL+YEY+ N+SLD+ +F   R   L+W++RY II G A GL+YLHE S
Sbjct:  293 RRGSKDVEKMAKTLKDSSLNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQS 442          
The following BLAST results are available for this feature:
BLAST of FC930683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
CRK27_ARATH6.422e-3547.68Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK15_ARATH6.422e-3550.00Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK36_ARATH1.869e-3455.38Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK40_ARATH2.440e-3447.40Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
Y1561_ARATH4.163e-3454.62Probable LRR receptor-like serine/threonine-protei... [more]
CRK32_ARATH4.163e-3447.30Putative cysteine-rich receptor-like protein kinas... [more]
CRK14_ARATH5.437e-3446.67Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK17_ARATH9.274e-3452.99Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK7_ARATH1.582e-3349.25Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK2_ARATH2.284e-3245.33Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC34010B09EF PostHarvC1 Citrus clementina cDNA clone C34010B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930683 ID=FC930683; Name=FC930683; organism=Citrus clementina; type=EST; length=699bp
GACATAACAAGGAAACAGAAGAAAAAGAAACCTCAACTTCATCAAATAGT
CTACAAAATCCAAATATCAACATCCTCCTTCTCCCGTCACCACCATCTCC
TAAACGCTCACAAATTTTCTCAATCTTTTTTCACAGACTTAATTGTTTGA
TTGGCAACTTTCCATGAGCAGAGGAAGGACATGACCAAACCCAAGAAATT
CTTTGATGGTCTTTTGAAACACTTCAATCTTGGTTCTAGAAGAGAGGGTG
ACAACGAAGAAGATTTGGAGAAGATTGCTGCTCGGGAACAGAAGCACTTT
CCATTTGAAGCTTTAGTTTCTGCTACCAAAAATTTTCACCCTTCTAATAA
GCTTGGTGAGGGAGGCTTTGGACCTGTCTACAAGGGGAAGTTGGATGATG
GAAGAGAAATTGCAGTGAAGAAGCTGTCTCATAGTTCGAATCAAGGGAAG
AAGGAATTTGAGAATGAGGCTAAGTTGTTGGCTCGTGTGCAGCACCGGAA
TGTTGTGAATCTGTTGGGGTATTGTGCTCATGGAGCGGAGAAGCTATTGA
TTTATGAGTATGTCATAAACGAGAGTCTGGACAAGGTTCTCTTCAAATCG
AGAAGAAATCATGAGCTTAATTGGAAGCAAAGGTATGACATTATCACTGG
CATTGCTCGGGGATTGCTTTACCTTCATGAGGATTCACACACTGCATCA
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