FC930683

Overview
NameFC930683
Unique NameFC930683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.025e-25
Identity = 59/132 (44.70%), Postives = 84/132 (63.64%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            + F    + +ATKNF     +G GGFG VY+G+L+DG  IA+K+ +  S QG  EFE E  +L+R++HR++V+L+G+C    E +L+YEY+ N +L   LF S     L+WKQR +   G ARGL YLH  S
Sbjct:  506 RKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNL-PPLSWKQRLEACIGSARGLHYLHTGS 636          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.025e-25
Identity = 57/137 (41.61%), Postives = 84/137 (61.31%), Query Frame = 1
Query:  283 REQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHE---LNWKQRYDIITGIARGLLYLHED 684
            R+ +   F  L+ AT  F  ++ +G GGFG V+K  L DG  +A+KKL   S QG +EF  E + L +++HRN+V LLGYC  G E+LL+YE++   SL++VL   R   +   L W++R  I  G A+GL +LH +
Sbjct:  821 RQLRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHN 957          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25
Identity = 74/199 (37.19%), Postives = 107/199 (53.77%), Query Frame = 1
Query:  166 EQRKDMTKPKKFFDGLLKH-------------FNLGSRREGDNEEDLEKIAAREQKH---FPFEALVSATKNFHPSNKLGEGGFGPVYKGKL-------DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAH----GAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHE 681
            +Q+KD  K K+    LL++             FNL + R   +   ++ +    +++   F +E L  AT  F     +GEGGFG VYKGK+       D    +A+KKL+    QG K++  E + L  V H NVV L+GYC+     G E+LL+YEY+ N SL+  LF  RR+H L WK+R +I+ G A GL YLH+
Sbjct:   14 KQQKDNNKNKRKGKELLQNSAPELTNRSETSSFNLQTPRSLPSPRSIKDLYTEREQNLRVFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLF-PRRSHTLPWKKRLEIMLGAAEGLTYLHD 211          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24
Identity = 59/130 (45.38%), Postives = 83/130 (63.85%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINES-LDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            K F  E +  AT+ +     +GEGGFG VY+G LDDG+E+AVK  S +S QG +EF+NE  LL+ +QH N+V LLGYC    +++L+Y ++ N S LD++  +  +   L+W  R  I  G ARGL YLH
Sbjct:  583 KPFTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLH 710          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 57/134 (42.54%), Postives = 87/134 (64.93%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESL-DKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDSH 690
            K F +  L  AT NF+ S ++G+GG+G VYKG L  G  +A+K+    S QG+KEF  E +LL+R+ HRN+V+LLG+C    E++L+YEY+ N +L D +  K +    L++  R  I  G A+G+LYLH +++
Sbjct:  611 KSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLK--EPLDFAMRLRIALGSAKGILYLHTEAN 742          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 66/157 (42.04%), Postives = 91/157 (57.96%), Query Frame = 1
Query:  232 GSRREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGK--KEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRN--HELNWKQRYDIITGIARGLLYLHEDSH 690
            G+   GDN + +E            + L S T NF   N LG GGFG VYKG+L DG +IAVK++ +    GK   EF++E  +L +V+HR++V LLGYC  G EKLL+YEY+   +L + LF+        L WKQR  +   +ARG+ YLH  +H
Sbjct:  558 GTSEVGDNIQMVEA----GNMLISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAH 710          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24
Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            K + F  L SAT +F   +++G GG+G VYKG L  G  +AVK+    S QG+KEF  E +LL+R+ HRN+V+LLGYC    E++L+YEY+ N SL   L  +R    L+   R  I  G ARG+LYLH ++
Sbjct:  617 KGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDAL-SARFRQPLSLALRLRIALGSARGILYLHTEA 747          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24
Identity = 63/154 (40.91%), Postives = 91/154 (59.09%), Query Frame = 1
Query:  244 EGDNEEDLEKIAAR-------EQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHE-LNWKQRYDIITGIARGLLYLHE 681
            E  N ++L +I ++         K   ++ L+ +T +F  +N +G GGFG VYK  L DG+++A+KKLS    Q ++EFE E + L+R QH N+V L G+C +  ++LLIY Y+ N SLD  L +       L WK R  I  G A+GLLYLHE
Sbjct:  697 ESMNRKELGEIGSKLVVLFQSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHE 850          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24
Identity = 59/148 (39.86%), Postives = 93/148 (62.84%), Query Frame = 1
Query:  244 EGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGRE-IAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHE--LNWKQRYDIITGIARGLLYLH 678
            +  N +  + + A   + F    + SAT +F     +G GGFG VYKG++D G   +AVK+L  +SNQG KEFE E ++L++++H ++V+L+GYC    E +L+YEY+ + +L   LF+  +  +  L+WK+R +I  G ARGL YLH
Sbjct:  488 DSTNTKPAKSLPADLCRRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLH 635          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 60/137 (43.80%), Postives = 81/137 (59.12%), Query Frame = 1
Query:  268 EKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            E     + K F +  +++ T NF     LG+GGFG VY G ++   ++AVK LSHSS QG K+F+ E +LL RV H+N+V L+GYC  G +  LIYEY+ N  LD+ +   R    LNW  R  I    A+GL YLH
Sbjct:  557 EPTIVTKNKKFTYAEVLTMTNNFQKI--LGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLH 691          
The following BLAST results are available for this feature:
BLAST of FC930683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
Y1357_ARATH6.025e-2544.70Probable receptor-like protein kinase At1g30570 OS... [more]
BRL2_ARATH6.025e-2541.61Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y5707_ARATH7.869e-2537.19Probable receptor-like protein kinase At5g47070 OS... [more]
NORK_PEA1.028e-2445.38Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y1684_ARATH1.342e-2442.54Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH1.342e-2442.04Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y5374_ARATH1.753e-2445.45Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_ARATH1.753e-2440.91Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y5900_ARATH2.290e-2439.86Putative receptor-like protein kinase At5g39000 OS... [more]
Y5181_ARATH2.990e-2443.80Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC34010B09EF PostHarvC1 Citrus clementina cDNA clone C34010B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930683 ID=FC930683; Name=FC930683; organism=Citrus clementina; type=EST; length=699bp
GACATAACAAGGAAACAGAAGAAAAAGAAACCTCAACTTCATCAAATAGT
CTACAAAATCCAAATATCAACATCCTCCTTCTCCCGTCACCACCATCTCC
TAAACGCTCACAAATTTTCTCAATCTTTTTTCACAGACTTAATTGTTTGA
TTGGCAACTTTCCATGAGCAGAGGAAGGACATGACCAAACCCAAGAAATT
CTTTGATGGTCTTTTGAAACACTTCAATCTTGGTTCTAGAAGAGAGGGTG
ACAACGAAGAAGATTTGGAGAAGATTGCTGCTCGGGAACAGAAGCACTTT
CCATTTGAAGCTTTAGTTTCTGCTACCAAAAATTTTCACCCTTCTAATAA
GCTTGGTGAGGGAGGCTTTGGACCTGTCTACAAGGGGAAGTTGGATGATG
GAAGAGAAATTGCAGTGAAGAAGCTGTCTCATAGTTCGAATCAAGGGAAG
AAGGAATTTGAGAATGAGGCTAAGTTGTTGGCTCGTGTGCAGCACCGGAA
TGTTGTGAATCTGTTGGGGTATTGTGCTCATGGAGCGGAGAAGCTATTGA
TTTATGAGTATGTCATAAACGAGAGTCTGGACAAGGTTCTCTTCAAATCG
AGAAGAAATCATGAGCTTAATTGGAAGCAAAGGTATGACATTATCACTGG
CATTGCTCGGGGATTGCTTTACCTTCATGAGGATTCACACACTGCATCA
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