FC930683

Overview
NameFC930683
Unique NameFC930683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24
Identity = 55/145 (37.93%), Postives = 88/145 (60.69%), Query Frame = 1
Query:  271 KIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLAR-----VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDSH 690
            K+   ++  F +  ++ AT NF     +G GG+G VY+G L DGRE+AVKKL     + +KEF  E ++L+        H N+V L G+C  G+EK+L++EY+   SL++++    +   L WK+R DI T +ARGL++LH + +
Sbjct:  793 KVIRLDKSTFTYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKTK---LQWKKRIDIATDVARGLVFLHHECY 934          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24
Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 1
Query:  304 FEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHE--LNWKQRYDIITGIARGLLYLH 678
            F  L+ AT  F   + +G GGFG VYK KL DG  +A+KKL   + QG +EF  E + + +++HRN+V LLGYC  G E+LL+YEY+   SL+ VL +  +     L+W  R  I  G ARGL +LH
Sbjct:  848 FAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLH 974          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24
Identity = 64/135 (47.41%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  274 IAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            I  RE+K   +  ++  T NF     LG+GGFG VY G LD G E+AVK LSHSS QG KEF+ E +LL RV HR++V L+GYC  G    LIYEY+ N  L + +   R  + L W+ R  I    A+GL YLH
Sbjct:  567 IITRERK-ITYPEVLKMTNNFE--RVLGKGGFGTVYHGNLD-GAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLH 697          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24
Identity = 69/193 (35.75%), Postives = 101/193 (52.33%), Query Frame = 1
Query:  115 FSQSFFTDLIV*LATFHEQRKDMTKPKKFFDGLLKHFNLGSRREGDNEEDLEKIAAREQ--KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFK---SRRNHELNWKQRYDIITGIARGLLYLH 678
            FS   F  L++ L    + +K   K +K+ + L    +   +     E     +A  E+  +   F  L+ AT  F     +G GGFG VYK +L DG  +A+KKL   + QG +EF  E + + +++HRN+V LLGYC  G E+LL+YEY+   SL+ VL +    +    LNW  R  I  G ARGL +LH
Sbjct:  784 FSFMCFVMLVMALYRVRKVQKKEQKREKYIESLPTSGSCSWKLSSVPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLH 976          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 61/152 (40.13%), Postives = 87/152 (57.24%), Query Frame = 1
Query:  241 REGDNEEDLEKIAAREQKH---FPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            R   N    E+  +    H     F  L S T NF  S  +G GGFG V++G L D  ++AVK+ S  S QG  EF +E  +L++++HR++V+L+GYC   +E +L+YEY+    L   L+ S  N  L+WKQR ++  G ARGL YLH  S
Sbjct:  455 RGSSNSRTTERTVSSSGYHTLRISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGS-TNPPLSWKQRLEVCIGAARGLHYLHTGS 605          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 57/152 (37.50%), Postives = 89/152 (58.55%), Query Frame = 1
Query:  241 REGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDSHTA 696
            ++ +  E L   +++    +P   +  AT +F  S  +G GGFG VYKG L D  E+AVK+ +  S QG  EF+ E ++L + +HR++V+L+GYC   +E +++YEY+   +L   L+       L+W+QR +I  G ARGL YLH  S  A
Sbjct:  456 KKNETGESLIFSSSKIGYRYPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRA 607          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 59/131 (45.04%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF-KSRRNHELNWKQRYDIITGIARGLLYLHE 681
            K    E L+ +T NF  +N +G GGFG VYK    DG + AVK+LS    Q ++EF+ E + L+R +H+N+V+L GYC HG ++LLIY ++ N SLD  L  +   N  L W  R  I  G ARGL YLH+
Sbjct:  740 KDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHK 870          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24
Identity = 67/171 (39.18%), Postives = 93/171 (54.39%), Query Frame = 1
Query:  166 EQRKDMTKPKKFFDGLLKHFNLGSRREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            ++  + + P+ F  G +K          D       I  +E+K F +  ++  TKNF     LG+GGFG VY G LDD  ++AVK LSHSS QG KEF+ E +LL RV HR++V L+GYC  G    LIYEY+    L + +      + L+W+ R  I    A+GL YLH
Sbjct:  526 QRTNEASGPRSFTTGTVK---------SDARSSSSSIITKERK-FTYSEVLKMTKNFE--RVLGKGGFGTVYHGNLDD-TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLH 683          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24
Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 1
Query:  268 EKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            E     + + F +  +V  T NF     LG+GGFG VY G ++   ++AVK LSHSS+QG K+F+ E +LL RV H+N+V L+GYC  G    LIYEY+ N  L + +  +R    LNW  R  I+   A+GL YLH
Sbjct:  558 EPAIVTKNRRFSYSQVVIMTNNFQ--RILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLH 692          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24
Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 1
Query:  301 PFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            PF  ++SAT NF     +G+GGFG VYK  L DG + A+K+    S QG  EF+ E ++L+R++HR++V+L GYC   +E +L+YE++   +L + L+ S     L WKQR +I  G ARGL YLH
Sbjct:  477 PFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNL-PSLTWKQRLEICIGAARGLDYLH 601          
The following BLAST results are available for this feature:
BLAST of FC930683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
Y1743_ARATH3.905e-2437.93Probable LRR receptor-like serine/threonine-protei... [more]
BRL3_ARATH3.905e-2444.88Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y1518_ARATH5.101e-2447.41Probable LRR receptor-like serine/threonine-protei... [more]
BRL1_ARATH5.101e-2435.75Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y5241_ARATH6.662e-2440.13Probable receptor-like protein kinase At5g24010 OS... [more]
Y2393_ARATH6.662e-2437.50Probable receptor-like protein kinase At2g39360 OS... [more]
PSKR2_ARATH6.662e-2445.04Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y5189_ARATH8.700e-2439.18Probable LRR receptor-like protein kinase At1g5189... [more]
Y5182_ARATH8.700e-2443.07Probable LRR receptor-like serine/threonine-protei... [more]
Y2232_ARATH8.700e-2444.44Probable receptor-like protein kinase At2g23200 OS... [more]

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Properties
Property NameValue
Genbank descriptionC34010B09EF PostHarvC1 Citrus clementina cDNA clone C34010B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930683 ID=FC930683; Name=FC930683; organism=Citrus clementina; type=EST; length=699bp
GACATAACAAGGAAACAGAAGAAAAAGAAACCTCAACTTCATCAAATAGT
CTACAAAATCCAAATATCAACATCCTCCTTCTCCCGTCACCACCATCTCC
TAAACGCTCACAAATTTTCTCAATCTTTTTTCACAGACTTAATTGTTTGA
TTGGCAACTTTCCATGAGCAGAGGAAGGACATGACCAAACCCAAGAAATT
CTTTGATGGTCTTTTGAAACACTTCAATCTTGGTTCTAGAAGAGAGGGTG
ACAACGAAGAAGATTTGGAGAAGATTGCTGCTCGGGAACAGAAGCACTTT
CCATTTGAAGCTTTAGTTTCTGCTACCAAAAATTTTCACCCTTCTAATAA
GCTTGGTGAGGGAGGCTTTGGACCTGTCTACAAGGGGAAGTTGGATGATG
GAAGAGAAATTGCAGTGAAGAAGCTGTCTCATAGTTCGAATCAAGGGAAG
AAGGAATTTGAGAATGAGGCTAAGTTGTTGGCTCGTGTGCAGCACCGGAA
TGTTGTGAATCTGTTGGGGTATTGTGCTCATGGAGCGGAGAAGCTATTGA
TTTATGAGTATGTCATAAACGAGAGTCTGGACAAGGTTCTCTTCAAATCG
AGAAGAAATCATGAGCTTAATTGGAAGCAAAGGTATGACATTATCACTGG
CATTGCTCGGGGATTGCTTTACCTTCATGAGGATTCACACACTGCATCA
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