FC930683

Overview
NameFC930683
Unique NameFC930683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24
Identity = 54/129 (41.86%), Postives = 84/129 (65.12%), Query Frame = 1
Query:  298 FPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRN-HELNWKQRYDIITGIARGLLYLHE 681
            +    L +AT      N +GEGG+G VY+G L DG ++AVK L ++  Q +KEF+ E +++ RV+H+N+V LLGYC  GA ++L+Y++V N +L++ +     +   L W  R +II G+A+GL YLHE
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHE 270          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24
Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHED 684
            + + +  LV AT+ F    +LG G  G VYKG L+D R +AVKKL +   QGK+ F+ E  ++ R+ H N+V + G+C+ G+ +LL+ EYV N SL  +LF    N  L+W+ R++I  G+A+GL YLH +
Sbjct:  522 RRYSYRELVKATRKFKV--ELGRGESGTVYKGVLEDDRHVAVKKLENV-RQGKEVFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHE 649          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23
Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESL-DKVLFKSRRNHELNWKQRYDIITGIARGLLYLHE 681
            K F F  + +AT NF P N LG+GGFG VYKG L +G  +AVK+L      G+ +F+ E +++    HRN++ L G+C    E++L+Y Y+ N S+ D++         L+W +R  I  G ARGL+YLHE
Sbjct:  286 KRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHE 416          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23
Identity = 56/132 (42.42%), Postives = 87/132 (65.91%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGRE-IAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHE--LNWKQRYDIITGIARGLLYLH 678
            + F    + SAT +F     +G GGFG VYKG++D G   +AVK+L  +SNQG KEF+ E ++L++++H ++V+L+GYC    E +L+YEY+ + +L   LF+  +  +  L+WK+R +I  G ARGL YLH
Sbjct:  511 RRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLH 642          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23
Identity = 57/124 (45.97%), Postives = 80/124 (64.52%), Query Frame = 1
Query:  313 LVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF-KSRRNHELNWKQRYDIITGIARGLLYLHE 681
            ++ +T +F+ +N +G GGFG VYK  L DG ++A+K+LS  + Q  +EF+ E + L+R QH N+V+LLGYC +  +KLLIY Y+ N SLD  L  K      L+WK R  I  G A GL YLH+
Sbjct:  736 ILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQ 859          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23
Identity = 60/139 (43.17%), Postives = 80/139 (57.55%), Query Frame = 1
Query:  292 KHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLD----------DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            K + F  L +ATKNF P + LG+GGFG VY+G +D           G  +A+K+L+  S QG  E+ +E   L  + HRN+V LLGYC    E LL+YE++   SL+  LF  RRN    W  R  I+ G ARGL +LH
Sbjct:   72 KVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLF--RRNDPFPWDLRIKIVIGAARGLAFLH 208          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23
Identity = 57/130 (43.85%), Postives = 77/130 (59.23%), Query Frame = 1
Query:  289 QKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLH 678
            ++ + +E +   T NF     LGEGGFG VY G ++D  ++AVK LS SS QG K+F+ E  LL RV H N+V L+GYC  G   +LIYEY+ N +L + L        L+W+ R  I    A+GL YLH
Sbjct:  578 KRSYTYEEVAVITNNFE--RPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLH 705          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23
Identity = 55/133 (41.35%), Postives = 84/133 (63.16%), Query Frame = 1
Query:  286 EQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRN-HELNWKQRYDIITGIARGLLYLHE 681
            E K      L+ AT NF  +N +G GGFG VYK  LD+G ++AVKKL+      +KEF+ E ++L+R +H N+V L GYC H + ++LIY ++ N SLD  L ++     +L+W +R +I+ G + GL Y+H+
Sbjct:  787 EVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQ 919          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23
Identity = 59/145 (40.69%), Postives = 87/145 (60.00%), Query Frame = 1
Query:  256 EEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGK--KEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRN--HELNWKQRYDIITGIARGLLYLH 678
            + D+E +  R  + F +E L  AT  F   +++G+G F  V+KG L DG  +AVK+   +S+  K  KEF NE  LL+R+ H +++NLLGYC  G+E+LL+YE++ + SL + L     N    LNW +R  I    ARG+ YLH
Sbjct:  479 QPDMEDLKIRRAQEFSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLH 623          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23
Identity = 60/146 (41.10%), Postives = 86/146 (58.90%), Query Frame = 1
Query:  259 EDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDD--GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNH--ELNWKQRYDIITGIARGLLYLHED 684
            E LE           ++ L +AT  F  +  +G GGFG V++G L      +IAVKK++ +S QG +EF  E + L R++H+N+VNL G+C    + LLIY+Y+ N SLD +L+   R     L+W  R+ I  GIA GLLYLHE+
Sbjct:  336 EVLEDWEINHPHRLRYKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEE 481          
The following BLAST results are available for this feature:
BLAST of FC930683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
Y1154_ARATH8.700e-2441.86Probable serine/threonine-protein kinase At1g01540... [more]
KPRO_MAIZE8.700e-2441.98Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
Y5457_ARATH1.136e-2341.22Probable LRR receptor-like serine/threonine-protei... [more]
Y5389_ARATH1.484e-2342.42Probable receptor-like protein kinase At5g38990 OS... [more]
PSKR1_DAUCA3.306e-2345.97Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
CX32_ARATH3.306e-2343.17Probable serine/threonine-protein kinase Cx32, chl... [more]
Y4245_ARATH5.639e-2343.85Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH5.639e-2341.35Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
CRI4_MAIZE5.639e-2340.69Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
LRKA2_ARATH7.365e-2341.10Lectin-domain containing receptor kinase A4.2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34010B09EF PostHarvC1 Citrus clementina cDNA clone C34010B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930683 ID=FC930683; Name=FC930683; organism=Citrus clementina; type=EST; length=699bp
GACATAACAAGGAAACAGAAGAAAAAGAAACCTCAACTTCATCAAATAGT
CTACAAAATCCAAATATCAACATCCTCCTTCTCCCGTCACCACCATCTCC
TAAACGCTCACAAATTTTCTCAATCTTTTTTCACAGACTTAATTGTTTGA
TTGGCAACTTTCCATGAGCAGAGGAAGGACATGACCAAACCCAAGAAATT
CTTTGATGGTCTTTTGAAACACTTCAATCTTGGTTCTAGAAGAGAGGGTG
ACAACGAAGAAGATTTGGAGAAGATTGCTGCTCGGGAACAGAAGCACTTT
CCATTTGAAGCTTTAGTTTCTGCTACCAAAAATTTTCACCCTTCTAATAA
GCTTGGTGAGGGAGGCTTTGGACCTGTCTACAAGGGGAAGTTGGATGATG
GAAGAGAAATTGCAGTGAAGAAGCTGTCTCATAGTTCGAATCAAGGGAAG
AAGGAATTTGAGAATGAGGCTAAGTTGTTGGCTCGTGTGCAGCACCGGAA
TGTTGTGAATCTGTTGGGGTATTGTGCTCATGGAGCGGAGAAGCTATTGA
TTTATGAGTATGTCATAAACGAGAGTCTGGACAAGGTTCTCTTCAAATCG
AGAAGAAATCATGAGCTTAATTGGAAGCAAAGGTATGACATTATCACTGG
CATTGCTCGGGGATTGCTTTACCTTCATGAGGATTCACACACTGCATCA
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