FC930686

Overview
NameFC930686
Unique NameFC930686
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length586
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930686_ssr31 microsatellite FC930686_ssr31:31..40. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:5..590. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_NITEC (Enolase OS=Nitrosomonas eutropha (strain C91) GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 90/166 (54.22%), Postives = 108/166 (65.06%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            I  V AR+I DSRGNPT+E DV    G + RA+VPSGAS G  EA+ELRDG +  Y GKGV KAV NVN  I   + G D TEQ  ID  ++ +LDG+ N     K +LGANAILAVSLAV KA A    +PLY++   L G  +  LPVP  N+INGG HA N+L
Sbjct:    4 IVDVIAREIIDSRGNPTIEADVLLESGVLGRASVPSGASVGTREAVELRDGDTQRYYGKGVLKAVENVNGEISEEIMGLDATEQCFIDKTLI-ELDGSEN-----KSRLGANAILAVSLAVAKAAAEESSLPLYRY---LGGTNSKWLPVPMMNLINGGVHANNRL 160          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_MAGSM (Enolase OS=Magnetococcus sp. (strain MC-1) GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 87/167 (52.10%), Postives = 109/167 (65.27%), Query Frame = 1
Query:   88 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            +I  +  R++ DSRGNPTVEVDV T DG   RAAVPSGASTG  EA+ELRDG  S +LGKGV KAV  VN ++   + G +  +Q  ID  M+  LDGT N     K +LGANAIL +S+AV KA A    +PLY++   L G    +LPVP  N+INGG+HA N +
Sbjct:    3 SIVEIHGREVIDSRGNPTVEVDVYTEDGGFGRAAVPSGASTGSREAVELRDGDKSRFLGKGVRKAVDAVNTVLAEVVLGMEVADQKGIDAAMI-ALDGTHN-----KSRLGANAILGISMAVAKAAADECDLPLYRY---LGGTNTSLLPVPMMNIINGGAHADNNV 160          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_LACAC (Enolase OS=Lactobacillus acidophilus GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 92/163 (56.44%), Postives = 108/163 (66.26%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGN 579
            I  V A +IFDSRGNPTVEV VT S+G V +A VPSGASTG  EA+ELRDGGS   GKGVSKAV+NVN  I  AL G DP +Q  ID  M+  LDGT N     K +LGANAIL VS+A   A A+  + PLY+++    G  +L +P    NVINGG HA N
Sbjct:    6 IENVHALEIFDSRGNPTVEVHVTLSNGVVGKAEVPSGASTGENEAVELRDGGSRLGGKGVSKAVNNVNTEINDALKGMDPFDQPKIDQTMI-DLDGTPN-----KGRLGANAILGVSMATAVAAANANRQPLYRYL----GGIDLEMPQTFHNVINGGEHADN 158          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_FRATO (Enolase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 92/170 (54.12%), Postives = 110/170 (64.71%), Query Frame = 1
Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            M+  I  V ARQI DSRGNPTVEVDV    G   RAAVPSGASTGI EALELRDG    +LGK V KAV NVN  I  A+ G D  +Q  ID  M+ +LDG+ N     K+ LGANAIL VSLA  +A A   + P Y+++ ++   K  ++PVP  NVINGGSHA N +
Sbjct:    1 MSSQIKQVFARQILDSRGNPTVEVDVVLESGAFGRAAVPSGASTGIREALELRDGNKALFLGKSVYKAVENVNTKIAQAVKGLDALDQRLIDKTMI-ELDGSEN-----KKNLGANAILGVSLATARAAASHLRKPFYRYLMDV---KEYLMPVPMMNVINGGSHADNNV 161          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_FRATN (Enolase OS=Francisella tularensis subsp. novicida (strain U112) GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 92/170 (54.12%), Postives = 110/170 (64.71%), Query Frame = 1
Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            M+  I  V ARQI DSRGNPTVEVDV    G   RAAVPSGASTGI EALELRDG    +LGK V KAV NVN  I  A+ G D  +Q  ID  M+ +LDG+ N     K+ LGANAIL VSLA  +A A   + P Y+++ ++   K  ++PVP  NVINGGSHA N +
Sbjct:    1 MSSQIKQVFARQILDSRGNPTVEVDVVLESGAFGRAAVPSGASTGIREALELRDGNKALFLGKSVYKAVENVNTKIAQAVKGLDALDQRLIDKTMI-ELDGSEN-----KKNLGANAILGVSLATARAAASHLRKPFYRYLMDV---KEYLMPVPMMNVINGGSHADNNV 161          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_FRASN (Enolase OS=Frankia sp. (strain EAN1pec) GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 88/162 (54.32%), Postives = 109/162 (67.28%), Query Frame = 1
Query:   88 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHA 573
            +I AV AR+I DSRGNPTVEV+V   DG + RAAVPSGASTG +EA+ELRDGG  Y GKGV+KAV  V   IGPA+   + TEQ  +D  ++  LDGT       K  LGANA+L VSLAV KA A    +PL+++   L G    +LPVP  N++NGG+HA
Sbjct:    3 SIEAVGAREILDSRGNPTVEVEVVLEDGTLGRAAVPSGASTGAFEAVELRDGGDRYGGKGVTKAVEAVIGRIGPAIMELEATEQRLLDATLI-DLDGTPG-----KSALGANALLGVSLAVAKAAAASSGLPLFRY---LGGPSAHLLPVPMMNILNGGAHA 155          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_DESVV (Enolase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 90/167 (53.89%), Postives = 109/167 (65.27%), Query Frame = 1
Query:   88 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            TI +V AR+I DSRGNPT+EV+V+   GH  RAAVPSGASTG  EALELRDG    Y GKGV KAV NV   I  A+ G D   Q  +DN ++  LDGT N     K++LGANA+L VSLA  +A +    +PLY++   L G    VLPVP  N+INGG+HA N L
Sbjct:    3 TIVSVWAREILDSRGNPTIEVEVSLESGHSGRAAVPSGASTGTREALELRDGDKGRYKGKGVEKAVDNVMGEIAEAVIGLDALRQVQLDNTLL-DLDGTDN-----KERLGANAMLGVSLATARAASSFLGLPLYQY---LGGVNAKVLPVPLMNIINGGAHAPNNL 160          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_DESVH (Enolase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 90/167 (53.89%), Postives = 109/167 (65.27%), Query Frame = 1
Query:   88 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            TI +V AR+I DSRGNPT+EV+V+   GH  RAAVPSGASTG  EALELRDG    Y GKGV KAV NV   I  A+ G D   Q  +DN ++  LDGT N     K++LGANA+L VSLA  +A +    +PLY++   L G    VLPVP  N+INGG+HA N L
Sbjct:    3 TIVSVWAREILDSRGNPTIEVEVSLESGHSGRAAVPSGASTGTREALELRDGDKGRYKGKGVEKAVDNVMGEIAEAVIGLDALRQVQLDNTLL-DLDGTDN-----KERLGANAMLGVSLATARAASSFLGLPLYQY---LGGVNAKVLPVPLMNIINGGAHAPNNL 160          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_CHLPD (Enolase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 92/164 (56.10%), Postives = 109/164 (66.46%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGN 579
            I  + ARQI DSRGNPTVEVDV T +    RAAVPSGASTG++EA+ELRDG S  YLGKGV KAV +VN +I   L G   T+Q  ID  M+  LDGT N     K +LGANA+L VS+A  KAGA    +PLY++I     N    LPVP  NV+NGG+HA N
Sbjct:    4 IRKILARQILDSRGNPTVEVDVYTENSF-GRAAVPSGASTGVHEAVELRDGDSAVYLGKGVLKAVDHVNTVINDRLKGMFVTDQEEIDMAML-ALDGTPN-----KSRLGANALLGVSMACAKAGAEYSGLPLYRYIGGTMAN---TLPVPMMNVLNGGAHADN 157          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_AZOSE (Enolase OS=Azoarcus sp. (strain EbN1) GN=eno PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.843e-37
Identity = 89/166 (53.61%), Postives = 108/166 (65.06%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDG-GSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            I  + AR+I DSRGNPTVE DV    G + RAAVPSGASTG  EA+ELRDG  + YLGKGV +AV NVN  I   L G D  EQ  ID  ++ +LDGT N     K +LGANA LAVS+A+ KA A    +PLY++     G+  + +PVP  NVINGG+HA N L
Sbjct:    4 IVDIIAREILDSRGNPTVEADVLLESGVMGRAAVPSGASTGSREAIELRDGDAARYLGKGVLQAVENVNTEISETLIGLDAEEQAFIDRTLI-ELDGTEN-----KSRLGANATLAVSMAIAKAAAEEAGLPLYRY---FGGSGPMAMPVPMMNVINGGAHANNSL 160          
The following BLAST results are available for this feature:
BLAST of FC930686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_NITEC4.843e-3754.22Enolase OS=Nitrosomonas eutropha (strain C91) GN=e... [more]
ENO_MAGSM4.843e-3752.10Enolase OS=Magnetococcus sp. (strain MC-1) GN=eno ... [more]
ENO_LACAC4.843e-3756.44Enolase OS=Lactobacillus acidophilus GN=eno PE=3 S... [more]
ENO_FRATO4.843e-3754.12Enolase OS=Francisella tularensis subsp. holarctic... [more]
ENO_FRATN4.843e-3754.12Enolase OS=Francisella tularensis subsp. novicida ... [more]
ENO_FRASN4.843e-3754.32Enolase OS=Frankia sp. (strain EAN1pec) GN=eno PE=... [more]
ENO_DESVV4.843e-3753.89Enolase OS=Desulfovibrio vulgaris subsp. vulgaris ... [more]
ENO_DESVH4.843e-3753.89Enolase OS=Desulfovibrio vulgaris (strain Hildenbo... [more]
ENO_CHLPD4.843e-3756.10Enolase OS=Chlorobium phaeobacteroides (strain DSM... [more]
ENO_AZOSE4.843e-3753.61Enolase OS=Azoarcus sp. (strain EbN1) GN=eno PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionC34010B12EF PostHarvC1 Citrus clementina cDNA clone C34010B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930686 ID=FC930686; Name=FC930686; organism=Citrus clementina; type=EST; length=586bp
GAATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCTAGAT
CTTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCG
TCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTC
GACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGG
TGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTG
ATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATC
ATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGA
CAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGT
GCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTC
TGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGC
CGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATG
TCATTAATGGTGGATCACATGCTGGAAACAAACTTG
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