FC930686

Overview
NameFC930686
Unique NameFC930686
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length586
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930686_ssr31 microsatellite FC930686_ssr31:31..40. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:5..590. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_CALS8 (Enolase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=eno PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.719e-42
Identity = 95/171 (55.56%), Postives = 119/171 (69.59%), Query Frame = 1
Query:   76 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            K+ ++ITAVKAR+I DSRGNPTVEV+V  +D  V RAAVPSGASTG++EA+ELRDG    Y+GKGV KAV NVN +I P + G +   Q  ID  M+ +LDGT N     K KLGANAIL VSLAV KA A+   +PLY++I  ++      LPVP  N++NGG HA N +
Sbjct:    2 KVDLSITAVKAREILDSRGNPTVEVEVVVNDEFVGRAAVPSGASTGMFEAVELRDGDKKRYMGKGVLKAVENVNEVIAPEIIGMNALNQVEIDRLMI-ELDGTEN-----KSKLGANAILGVSLAVAKAAANALGLPLYQYIGGVNAK---YLPVPMMNILNGGKHADNSV 163          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_FLAPJ (Enolase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=eno PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.932e-42
Identity = 96/161 (59.63%), Postives = 110/161 (68.32%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHA 573
            I  + ARQIFDSRGNPT+EVDV T +G + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV NVN II   L G    EQ  ID  M+  LDGT N     K  LGANAIL VSLA  KA A+   +PLY++I  +S N    LPVP  N+INGGSH+
Sbjct:    4 IIKIHARQIFDSRGNPTIEVDVVTENGVLGRAAVPSGASTGEHEAMELRDGGKAYLGKGVLKAVENVNTIIASELLGTSVFEQNLIDKIMI-DLDGTPN-----KSNLGANAILGVSLAAAKAAANELGLPLYRYIGGVSAN---TLPVPMMNIINGGSHS 155          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_GRAFK (Enolase OS=Gramella forsetii (strain KT0803) GN=eno PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.829e-42
Identity = 96/161 (59.63%), Postives = 112/161 (69.57%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHA 573
            I  + ARQIFDSRGNPTVEVDV T +G + RAAVPSGASTG +EA+ELRDGG D++GKGV KAV NVN  I   L G    EQ  ID  M+  LDGT N     K KLGANAIL VSLAV KA A+   +PLY+++  +S N    LPVP  N+INGGSH+
Sbjct:    4 ILDIHARQIFDSRGNPTVEVDVYTENGIMGRAAVPSGASTGEHEAVELRDGGKDFMGKGVQKAVDNVNGEIADHLLGFSVFEQNLIDQTMI-DLDGTPN-----KSKLGANAILGVSLAVAKAAANELNMPLYRYVGGVSAN---TLPVPMMNIINGGSHS 155          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_CLAHE (Enolase OS=Cladosporium herbarum GN=ENO PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 5.001e-42
Identity = 97/169 (57.40%), Postives = 122/169 (72.19%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKL 585
            I+ + +R ++DSRGNPTVEVD+ T  G + RA VPSGASTG +EA ELRDG  S + GKGV+KAV+NVN II PAL  +  D  +Q A+D ++  +LDGT N     K K+GANAIL VS+AV KA A  K++PLY HI++LSG K   VLPVP  NV+NGGSHAG +L
Sbjct:    3 ISKIHSRYVYDSRGNPTVEVDIVTETG-LHRAIVPSGASTGSHEACELRDGDKSKWAGKGVTKAVANVNEIIAPALIKENLDVKDQAAVDAFL-NKLDGTTN-----KTKIGANAILGVSMAVAKAAAAEKRVPLYAHISDLSGTKKPFVLPVPFMNVVNGGSHAGGRL 164          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO1_LACLS (Enolase 1 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=eno1 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.001e-42
Identity = 95/165 (57.58%), Postives = 118/165 (71.52%), Query Frame = 1
Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHA 573
            M +TI  + AR+IFDSRGNPTVEVDV  +DG + RAAVPSGASTG  EA+ELRDGG+   GK VSKAV+NVN  I  AL G+ P  Q  +D+ M+ +LDGT N     K +LGANAIL VS+A+ +A A+ +KIPLY+++    G  +L LP P FNVINGG HA
Sbjct:    1 MTVTIENIHAREIFDSRGNPTVEVDVRLTDGTLGRAAVPSGASTGDREAVELRDGGARLQGKDVSKAVANVNGEIYEALKGQSPFNQAKLDHLMI-ELDGTKN-----KSRLGANAILGVSMAIARAAANSEKIPLYRYL----GGVDLELPQPFFNVINGGVHA 155          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_PSYA2 (Enolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=eno PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.531e-42
Identity = 95/164 (57.93%), Postives = 116/164 (70.73%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGN 579
            I  ++AR+I DSRGNPT+E DV  +DG + RAA PSGASTG  EALELRDG  S Y+GKGV KAV+NVN+ I  AL  K+ T Q AID+ M+  LDGT N     K  LGANAILAVSLAV KA A  + +PL+++IA+L    +L +PVP  N+INGG HA N
Sbjct:   12 IKDIRAREILDSRGNPTIEADVILADGTIGRAAAPSGASTGSREALELRDGDKSRYMGKGVKKAVANVNSQIRSALMDKNVTAQQAIDDAMI-ALDGTDN-----KDNLGANAILAVSLAVAKAAAKSQSLPLHQYIADLRNQTSLTMPVPMMNIINGGEHADN 169          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_THEON (Enolase OS=Thermococcus onnurineus (strain NA1) GN=eno PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.530e-42
Identity = 101/165 (61.21%), Postives = 114/165 (69.09%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            ITAV AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGG  Y GKGV +AV NVN II P L G D T Q  ID  M+ +LDGT N     K  LGANAIL VSLAV KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L
Sbjct:    7 ITAVVAREILDSRGNPTVEVEVYTPIS-MGRAAVPSGASTGTHEALELRDGGKRYHGKGVRRAVENVNKIIAPELIGMDVTWQRDIDTLML-ELDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYI---GGTNAYVMPVPMSNVINGGVHAGNEL 161          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_STRTR (Enolase OS=Streptococcus thermophilus GN=eno PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.530e-42
Identity = 96/165 (58.18%), Postives = 117/165 (70.91%), Query Frame = 1
Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHA 573
            M +TI  + AR+IFDSRGNPTVEVDV  +DG + RAAVPSGASTG  EA+ELRDGG+   GKGVSKAV+NVN  I  AL G+ P  Q  +D+ M+ +LDGT N     K  LGANAIL VS+A+ +A A+ +KIPLY++     G  +L LP P FNVINGG HA
Sbjct:    1 MTVTIENIHAREIFDSRGNPTVEVDVRLTDGTLGRAAVPSGASTGDREAVELRDGGARLQGKGVSKAVANVNGEIYEALKGQSPFNQAKLDHLMI-ELDGTEN-----KSCLGANAILGVSMAIFRAAANSEKIPLYRYF----GGVDLELPQPFFNVINGGVHA 155          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_PSEMY (Enolase OS=Pseudomonas mendocina (strain ymp) GN=eno PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.530e-42
Identity = 96/167 (57.49%), Postives = 112/167 (67.07%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKL 585
            I  +K R++ DSRGNPTVE DV    G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD T+Q A+D  M+ +LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G   +  +PVP  N+INGG HA N +
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILEGGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDATDQQALDRAMI-ELDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGVYSMPVPMMNIINGGEHADNNV 164          
BLAST of FC930686 vs. ExPASy Swiss-Prot
Match: ENO_RHIEC (Enolase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=eno PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.114e-41
Identity = 94/165 (56.97%), Postives = 112/165 (67.88%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 585
            IT + AR+I DSRGNPTVEVDV   DG + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV   N  I  A+ G D   Q  IDN M+ +LDGT N     K +LGANAIL VSLAV KA A    +PLY+++   S +   +LPVP  N+INGG+HA N +
Sbjct:    4 ITDIIAREILDSRGNPTVEVDVYLEDGSMGRAAVPSGASTGAHEAVELRDGGKRYLGKGVEKAVEAANTEIFDAIGGIDAENQIQIDNIMI-ELDGTPN-----KSRLGANAILGVSLAVAKAAAQASGLPLYRYVGGASAS---LLPVPMMNIINGGAHADNPI 159          
The following BLAST results are available for this feature:
BLAST of FC930686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_CALS81.719e-4255.56Enolase OS=Caldicellulosiruptor saccharolyticus (s... [more]
ENO_FLAPJ2.932e-4259.63Enolase OS=Flavobacterium psychrophilum (strain JI... [more]
ENO_GRAFK3.829e-4259.63Enolase OS=Gramella forsetii (strain KT0803) GN=en... [more]
ENO_CLAHE5.001e-4257.40Enolase OS=Cladosporium herbarum GN=ENO PE=1 SV=2[more]
ENO1_LACLS5.001e-4257.58Enolase 1 OS=Lactococcus lactis subsp. cremoris (s... [more]
ENO_PSYA26.531e-4257.93Enolase OS=Psychrobacter arcticus (strain DSM 1730... [more]
ENO_THEON8.530e-4261.21Enolase OS=Thermococcus onnurineus (strain NA1) GN... [more]
ENO_STRTR8.530e-4258.18Enolase OS=Streptococcus thermophilus GN=eno PE=3 ... [more]
ENO_PSEMY8.530e-4257.49Enolase OS=Pseudomonas mendocina (strain ymp) GN=e... [more]
ENO_RHIEC1.114e-4156.97Enolase OS=Rhizobium etli (strain CFN 42 / ATCC 51... [more]

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Properties
Property NameValue
Genbank descriptionC34010B12EF PostHarvC1 Citrus clementina cDNA clone C34010B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930686 ID=FC930686; Name=FC930686; organism=Citrus clementina; type=EST; length=586bp
GAATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCTAGAT
CTTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCG
TCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTC
GACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGG
TGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTG
ATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATC
ATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGA
CAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGT
GCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTC
TGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGC
CGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATG
TCATTAATGGTGGATCACATGCTGGAAACAAACTTG
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