FC930695

Overview
NameFC930695
Unique NameFC930695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.343e-91
Identity = 173/249 (69.48%), Postives = 202/249 (81.12%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVT------PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVILSSH GRPKG T       K+ L P+  RLSELLG  V   NDCIGEEV+  VA +  G VLLLENVRFH  EE N PEFA++LAS+ADLYVNDAFG+AHRAHASTEGV ++L+PSVAG+L++KEL YL  A+ NP++P AAIVGGSKVS+KIGVIE+LLEKVD LLLGGGMIFTFYKA+G +VG SLVEEDKL+L  +L  KAK +GV+LLLPTDVV+AD FAADAN++ V   +IPDGWMGL
Sbjct:   55 GAKVILSSHFGRPKGETFAERVKDKFRLTPVAARLSELLGKPVPKPNDCIGEEVKAQVAAMQNGDVLLLENVRFHPGEEANTPEFAQELASVADLYVNDAFGTAHRAHASTEGVTRYLRPSVAGYLIEKELQYLQSAIENPQRPLAAIVGGSKVSSKIGVIETLLEKVDKLLLGGGMIFTFYKARGLNVGKSLVEEDKLELARTLEAKAKERGVALLLPTDVVVADAFAADANAQTVSVESIPDGWMGL 303          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.983e-90
Identity = 171/243 (70.37%), Postives = 196/243 (80.66%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SH GRPKGV  K  L P+  RLSELLG EV   +D IG+EV   VA +  G VLLLENVRF+ EEEKND EFAKKLA+ AD YVNDAFG+AHRAHASTEGV KFL PSVAG+L++KEL YL  A+ NP++P AAI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G SVG SLVEEDKL+L  SL  KAK +GV+LLLPTDVV+AD FA DANS+ V    IPDGWMGL
Sbjct:   55 GAKVILASHFGRPKGVDDKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVAALQNGQVLLLENVRFYPEEEKNDAEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQNAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKAKERGVALLLPTDVVLADNFAPDANSQTVSIENIPDGWMGL 297          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_TRIEI (Phosphoglycerate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pgk PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.864e-89
Identity = 168/244 (68.85%), Postives = 202/244 (82.79%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SH GRPKG V  K  L  +  RLSE+LG EVK  +DCIG+EV   VAE+ +G V+LLENVRF+  EE NDPEFAK+LAS+ADLYVNDAFG+AHRAHASTEGV K+L PSVAG+L+++EL +L GA+ +P+KP AAI+GGSKVS+KIGVIE+LL+K D LLLGGGMIFTFYKA+G SVG SLVEEDK++L  SL  KAK KGV++LLPTDVV+ADKF  +AN++ V   AIPDGWMGL
Sbjct:   54 GAKVILTSHFGRPKGKVNEKMRLTLVGERLSEVLGKEVKKCDDCIGDEVTSTVAEMKDGDVVLLENVRFYSGEEGNDPEFAKQLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGYLIEQELKFLQGAIDSPQKPLAAIIGGSKVSSKIGVIEALLDKCDKLLLGGGMIFTFYKARGLSVGKSLVEEDKIELAKSLEAKAKEKGVTMLLPTDVVVADKFDPEANTQTVSIEAIPDGWMGL 297          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNPX (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH8102) GN=pgk PE=3 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.572e-87
Identity = 167/244 (68.44%), Postives = 193/244 (79.10%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVILS+H GRPKG V     L P+  RLSELLG  V   + CIG + E  V  + +G V+LLENVRF  EEEKND  FA+KLA LA++YVNDAFG+AHRAHASTEGV KFLKP+VAGFLM+KEL YL GAV  PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD FA DANS+    TAIPDGWMGL
Sbjct:   55 GAKVILSAHFGRPKGQVNDAMRLTPVAARLSELLGKPVAKTDSCIGPDAEAKVNAMADGDVVLLENVRFFAEEEKNDAGFAEKLAGLAEVYVNDAFGAAHRAHASTEGVTKFLKPAVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVVLADNFAPDANSQVADVTAIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNS9 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk PE=3 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.052e-87
Identity = 166/244 (68.03%), Postives = 193/244 (79.10%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKV+L++H GRPKG V     L P+  RLSELLG  V   + CIG + E  V  +  G V+LLENVRF  EEEKND  FA+KLA+LAD+YVNDAFG+AHRAHASTEGV KFLKPSVAGFLM+KEL YL GAV  PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G +VG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD FA DANS+    TAIPDGWMGL
Sbjct:   55 GAKVVLAAHFGRPKGQVNEAMRLTPVAARLSELLGKTVTKTDSCIGPDAEAKVGAMANGDVVLLENVRFVAEEEKNDSGFAEKLAALADVYVNDAFGAAHRAHASTEGVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVVLADNFAPDANSQIADVTAIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.052e-87
Identity = 166/244 (68.03%), Postives = 192/244 (78.69%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL++H GRPKG V  K  L P+  RLSELL   V     CIG + E  V  +  G V+LLENVRF  EEEKND +FAK+LA LAD+YVNDAFG+AHRAHASTEGV KFLKPSVAGFLM+KEL YL GAV  PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G +VG SLVEEDKL+L   L  KAK+KGV LLLPTDV++AD FA DANS+    TAIPDGWMGL
Sbjct:   55 GAKVILAAHFGRPKGQVNDKMRLTPVATRLSELLSKPVTKTESCIGPDAEAKVNAMANGDVVLLENVRFFAEEEKNDADFAKQLAGLADVYVNDAFGAAHRAHASTEGVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVLLADNFAPDANSQVADVTAIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNPW (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH7803) GN=pgk PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.681e-87
Identity = 166/244 (68.03%), Postives = 193/244 (79.10%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVILS+H GRPKG V     L P+  RLSELLG  V   + CIG + E  V  + +G V+LLENVRF  EEEKN+  FA+KLA LA++YVNDAFG+AHRAHASTEGV KFLKP+VAGFLM+KEL YL GAV  PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD FA DANS+    TAIPDGWMGL
Sbjct:   55 GAKVILSAHFGRPKGQVNDAMRLTPVAARLSELLGKPVAKTDSCIGPDAEAKVGAMADGDVVLLENVRFFAEEEKNEAGFAEKLAGLAEVYVNDAFGAAHRAHASTEGVTKFLKPAVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVVLADNFAPDANSQVADVTAIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.681e-87
Identity = 166/244 (68.03%), Postives = 193/244 (79.10%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SH GRPKG V     L P+  RLSELLG  V   +DCIG+EV   V  +  G V LLENVRFH  EE NDPEFA++LAS+ADLYVNDAFG+AHRAHASTEGV   L PSVAG+L++KEL YL  A+  P++P AAIVGGSKVS+KIGVIE+LL+KVD LL+GGGMIFTFYKA+G +VG SLVEEDKLDL  +L  KAK KGV+LLLP+DVV+AD FAADAN++ V    IPDGWMGL
Sbjct:   55 GAKVILASHFGRPKGQVNESMRLTPVAARLSELLGQAVTKCDDCIGDEVAAKVGALQNGQVALLENVRFHSGEEANDPEFARQLASVADLYVNDAFGTAHRAHASTEGVTHHLSPSVAGYLIEKELKYLQAAIEGPQRPLAAIVGGSKVSSKIGVIETLLDKVDKLLIGGGMIFTFYKARGLAVGKSLVEEDKLDLARTLEAKAKEKGVALLLPSDVVVADNFAADANAQTVSINNIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNY3 (Phosphoglycerate kinase OS=Synechocystis sp. (strain PCC 6803) GN=pgk PE=3 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 1.019e-86
Identity = 165/244 (67.62%), Postives = 188/244 (77.05%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL SH GRPKG V     L P+  RL ELLG  V   +DCIG EV   +A +P GGV LLEN+RFH  EE ND EFAK LA+ ADLYVNDAFG+AHRAHASTEGV  FL P+VAG+L++KEL +L GA+  PK+P  AIVGGSKVS+KIGVIE+LL+K D L++GGGMIFTFYKAQG + G SLVEEDKLDL  SLM KAK KGV  LLPTDVV+AD FA DAN++ V   AIPDGWMGL
Sbjct:   55 GAKVILGSHFGRPKGKVVDSMRLTPVGDRLGELLGQPVVKCDDCIGAEVTAKIASLPNGGVALLENLRFHAGEEGNDAEFAKALAANADLYVNDAFGTAHRAHASTEGVTHFLSPNVAGYLIEKELQFLQGAIEAPKRPLVAIVGGSKVSSKIGVIETLLDKCDKLIIGGGMIFTFYKAQGLNTGKSLVEEDKLDLAKSLMAKAKEKGVEFLLPTDVVVADNFAPDANAQTVGVDAIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNR3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain RCC307) GN=pgk PE=3 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.964e-86
Identity = 163/244 (66.80%), Postives = 194/244 (79.51%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVILS+H GRPKG V     L P+  RLSELLG  V   + CIG + E  VA + +G V+LLENVRF  EEEKN+  FA+KLA+LA++YVNDAFG+AHRAHASTEGV K+L PSVAG+LM+KEL YL GAV +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD FA DANS+     AIP+GWMGL
Sbjct:   55 GAKVILSAHFGRPKGQVNEDMRLTPVAARLSELLGAPVAKTDSCIGSDAEAKVAAMADGDVVLLENVRFFAEEEKNESGFAEKLAALAEVYVNDAFGAAHRAHASTEGVTKYLSPSVAGYLMEKELQYLQGAVDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADNFAPDANSQVASIDAIPEGWMGL 298          
The following BLAST results are available for this feature:
BLAST of FC930695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CYAP42.343e-9169.48Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_NOSP71.983e-9070.37Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_TRIEI2.864e-8968.85Phosphoglycerate kinase OS=Trichodesmium erythraeu... [more]
PGK_SYNPX1.572e-8768.44Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNS92.052e-8768.03Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNS32.052e-8768.03Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNPW2.681e-8768.03Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_ACAM12.681e-8768.03Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGK_SYNY31.019e-8667.62Phosphoglycerate kinase OS=Synechocystis sp. (stra... [more]
PGK_SYNR32.964e-8666.80Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34010C09EF PostHarvC1 Citrus clementina cDNA clone C34010C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930695 ID=FC930695; Name=FC930695; organism=Citrus clementina; type=EST; length=733bp
CATGGCGCCAAAGTCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGT
TACACCCAAGTACAGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTC
TTGGAGTTGAGGTTAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAA
AAAATGGTGGCTGAAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGT
GAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGC
TAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCAT
AGAGCCCATGCTTCCACTGAGGGTGTAGCTAAGTTCTTGAAGCCTTCTGT
GGCTGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTT
CAAATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCA
ACTAAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATT
GCTCGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTG
TTGGTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTT
ATGGAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGT
TGTTATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAGGNTGGTGCCCA
GCACGGCAATTCCAGATGGTTGGATGGGCTTGG
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