FC930695

Overview
NameFC930695
Unique NameFC930695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOBL (Phosphoglycerate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pgk PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.930e-69
Identity = 134/246 (54.47%), Postives = 182/246 (73.98%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPK-YSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAK+IL SH+G+PKG   K  SL P+  RLSE+L  EV  A+D   +GE  +K V ++ +G V+LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+        I +G+MGL
Sbjct:   53 GAKIILCSHMGKPKGEPKKELSLLPVAKRLSEMLNKEVIFADDDNVVGENAKKAVEDMKDGDVVLLQNTRYRKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOBJ (Phosphoglycerate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=pgk PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.930e-69
Identity = 134/246 (54.47%), Postives = 182/246 (73.98%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPK-YSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAK+IL SH+G+PKG   K  SL P+  RLSE+L  EV  A+D   +GE  +K V ++ +G V+LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+        I +G+MGL
Sbjct:   53 GAKIILCSHMGKPKGEPKKELSLLPVAKRLSEMLNKEVIFADDDNVVGENAKKAVEDMKDGDVVLLQNTRYRKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOBH (Phosphoglycerate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.930e-69
Identity = 134/246 (54.47%), Postives = 182/246 (73.98%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPK-YSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAK+IL SH+G+PKG   K  SL P+  RLSE+L  EV  A+D   +GE  +K V ++ +G V+LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+        I +G+MGL
Sbjct:   53 GAKIILCSHMGKPKGEPKKELSLLPVAKRLSEMLNKEVIFADDDNVVGENAKKAVEDMKDGDVVLLQNTRYRKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOB6 (Phosphoglycerate kinase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=pgk PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.930e-69
Identity = 134/246 (54.47%), Postives = 182/246 (73.98%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPK-YSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAK+IL SH+G+PKG   K  SL P+  RLSE+L  EV  A+D   +GE  +K V ++ +G V+LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+        I +G+MGL
Sbjct:   53 GAKIILCSHMGKPKGEPKKELSLLPVAKRLSEMLNKEVIFADDDNVVGENAKKAVEDMKDGDVVLLQNTRYRKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOB1 (Phosphoglycerate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.930e-69
Identity = 134/246 (54.47%), Postives = 182/246 (73.98%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPK-YSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAK+IL SH+G+PKG   K  SL P+  RLSE+L  EV  A+D   +GE  +K V ++ +G V+LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+        I +G+MGL
Sbjct:   53 GAKIILCSHMGKPKGEPKKELSLLPVAKRLSEMLNKEVIFADDDNVVGENAKKAVEDMKDGDVVLLQNTRYRKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CHLSY (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.292e-69
Identity = 140/244 (57.38%), Postives = 174/244 (71.31%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELL--GVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGW 723
            HGA V+L SHLGRPKG   PKYSL+P+V RL ELL    EVK      G   E  VA +  G VL+LEN RF   EE NDP  A +LA L D++VNDAFG+AHRA+ASTEGVA +L P+VAGFLM+KEL Y+ GA++NP++PF  ++GG+K+S KIGVIE+LL KVD LL+GGGM  TF  A+G +VG SLVE D + +   LM +A+ +G  LLLP DVVIAD F+ADA  + V  + IP GW
Sbjct:   51 HGASVVLMSHLGRPKGKPNPKYSLRPVVERLFELLPEAKEVKKTEAITGPAAEAAVAMLKPGQVLVLENTRFDPREEPNDPAMAAELAKLGDVFVNDAFGTAHRANASTEGVAHYL-PAVAGFLMEKELTYIGGALNNPQRPFVTVIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAKGLNVGDSLVEPDSVPVAQQLMARAEERGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGW 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CHLAA (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.292e-69
Identity = 140/244 (57.38%), Postives = 174/244 (71.31%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELL--GVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGW 723
            HGA V+L SHLGRPKG   PKYSL+P+V RL ELL    EVK      G   E  VA +  G VL+LEN RF   EE NDP  A +LA L D++VNDAFG+AHRA+ASTEGVA +L P+VAGFLM+KEL Y+ GA++NP++PF  ++GG+K+S KIGVIE+LL KVD LL+GGGM  TF  A+G +VG SLVE D + +   LM +A+ +G  LLLP DVVIAD F+ADA  + V  + IP GW
Sbjct:   51 HGASVVLMSHLGRPKGKPNPKYSLRPVVERLFELLPEAKEVKKTEAITGPAAEAAVAMLKPGQVLVLENTRFDPREEPNDPAMAAELAKLGDVFVNDAFGTAHRANASTEGVAHYL-PAVAGFLMEKELTYIGGALNNPQRPFVTVIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAKGLNVGDSLVEPDSVPVAQQLMARAEERGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGW 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOBK (Phosphoglycerate kinase OS=Clostridium botulinum (strain Okra / Type B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.300e-69
Identity = 133/246 (54.07%), Postives = 182/246 (73.98%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPK-YSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAK+IL SH+G+PKG   K  SL P+  RLSE+L  EV  A+D   +GE  ++ V ++ +G V+LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+        I +G+MGL
Sbjct:   53 GAKIILCSHMGKPKGEPKKELSLLPVAKRLSEMLNKEVIFADDDNVVGENAKRAVEDMKDGDVVLLQNTRYRKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_ROSCS (Phosphoglycerate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgk PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.615e-69
Identity = 142/247 (57.49%), Postives = 170/247 (68.83%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELL--GVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            HGA VIL SHLGRPK  V     L P+V RL+ELL     VK +    G   E    ++  G VL+LEN RF   EE ND   A++LA L D+YVNDAFGSAHRAHASTEGVA+FL P+VAGFLM+ EL  L GA+ NP +PF  I+GG+K+S KIGVIE+LL KVD LL+GGGM  TF  AQGH +G SLVE D   +  SL+++A  +GV L+LPTDVVIAD F+ADAN + VP   IP GW  L
Sbjct:   50 HGAAVILMSHLGRPKNKVVESMRLAPVVARLAELLPEAKAVKGSQATTGPAAEAAARDLKPGEVLVLENTRFDPREEANDESMARELAKLGDVYVNDAFGSAHRAHASTEGVARFL-PAVAGFLMEAELAALQGALENPARPFVTIIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGHEMGDSLVEPDSAPIAKSLLDQAAQRGVRLMLPTDVVIADAFSADANRKVVPVGEIPPGWRAL 295          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BORBZ (Phosphoglycerate kinase OS=Borrelia burgdorferi (strain ZS7) GN=pgk PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.615e-69
Identity = 129/244 (52.87%), Postives = 182/244 (74.59%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GA+++L SHLGRP G    KYSLKP+  RLSELLG +VKM +DCIG EV     ++ +G V+LLENVRF+ EEEKND  FAKKL+   D++VNDAFG+AHRAHAST GVA +L PSV GFLM+KE  +L G + NP++PF +I+GGSKVS+KI V+ESLL K +++++GGGM +TF  ++G+S+G SL+E++ + + +S ++KAK  GV ++LP D ++AD F  ++    + S  IP+  +G+
Sbjct:   52 GARIVLVSHLGRPDGKKNSKYSLKPVANRLSELLGQDVKMLSDCIGSEVVNSTLQMKDGDVVLLENVRFYAEEEKNDKNFAKKLSENGDVFVNDAFGAAHRAHASTVGVADYL-PSVGGFLMEKEDKFLGGILKNPERPFVSIIGGSKVSSKIAVLESLLSKSNVVVIGGGMAYTFLHSEGYSIGKSLLEDEYIGIASSFLKKAKELGVKVILPLDHIVADDFNKNSIPEYINSFNIPENKIGM 294          
The following BLAST results are available for this feature:
BLAST of FC930695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOBL1.930e-6954.47Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBJ1.930e-6954.47Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBH1.930e-6954.47Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB61.930e-6954.47Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB11.930e-6954.47Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CHLSY3.292e-6957.38Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_CHLAA3.292e-6957.38Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_CLOBK4.300e-6954.07Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_ROSCS5.615e-6957.49Phosphoglycerate kinase OS=Roseiflexus castenholzi... [more]
PGK_BORBZ5.615e-6952.87Phosphoglycerate kinase OS=Borrelia burgdorferi (s... [more]

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Properties
Property NameValue
Genbank descriptionC34010C09EF PostHarvC1 Citrus clementina cDNA clone C34010C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930695 ID=FC930695; Name=FC930695; organism=Citrus clementina; type=EST; length=733bp
CATGGCGCCAAAGTCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGT
TACACCCAAGTACAGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTC
TTGGAGTTGAGGTTAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAA
AAAATGGTGGCTGAAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGT
GAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGC
TAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCAT
AGAGCCCATGCTTCCACTGAGGGTGTAGCTAAGTTCTTGAAGCCTTCTGT
GGCTGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTT
CAAATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCA
ACTAAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATT
GCTCGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTG
TTGGTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTT
ATGGAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGT
TGTTATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAGGNTGGTGCCCA
GCACGGCAATTCCAGATGGTTGGATGGGCTTGG
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