FC930695

Overview
NameFC930695
Unique NameFC930695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOK5 (Phosphoglycerate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.081e-67
Identity = 131/247 (53.04%), Postives = 175/247 (70.85%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            + AKVIL SHLG+PKG V P+ SL P+  RLSELL  EV  A D   +GE  +  V  + +G V+LL+N R+  EE KN   F+K+LASL +++VNDAFG+AHRAH ST GV KFL  +V G+L+QKEL++L  A+ NP +PF AI+GG KVS KI VI +LLEKVD L++GGGM +TF +AQG+++G+S+VEEDK++    +++KAK KG+ LLLP D V+ DKF   A         I DG+MG+
Sbjct:   52 NNAKVILCSHLGKPKGEVKPEMSLLPVAKRLSELLKKEVVFAADDNVVGENAKAAVKNMKDGDVILLQNTRYRIEETKNQDNFSKELASLGEIFVNDAFGTAHRAHCSTVGVTKFLPTAVCGYLIQKELEFLGNAIENPSRPFTAILGGVKVSDKINVINNLLEKVDTLIIGGGMSYTFARAQGYTIGTSVVEEDKIEYAKEMIDKAKEKGIKLLLPIDRVVTDKFDESAEPILEDDKNIKDGYMGM 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOK1 (Phosphoglycerate kinase OS=Clostridium kluyveri (strain NBRC 12016) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.081e-67
Identity = 131/247 (53.04%), Postives = 175/247 (70.85%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            + AKVIL SHLG+PKG V P+ SL P+  RLSELL  EV  A D   +GE  +  V  + +G V+LL+N R+  EE KN   F+K+LASL +++VNDAFG+AHRAH ST GV KFL  +V G+L+QKEL++L  A+ NP +PF AI+GG KVS KI VI +LLEKVD L++GGGM +TF +AQG+++G+S+VEEDK++    +++KAK KG+ LLLP D V+ DKF   A         I DG+MG+
Sbjct:   52 NNAKVILCSHLGKPKGEVKPEMSLLPVAKRLSELLKKEVVFAADDNVVGENAKAAVKNMKDGDVILLQNTRYRIEETKNQDNFSKELASLGEIFVNDAFGTAHRAHCSTVGVTKFLPTAVCGYLIQKELEFLGNAIENPSRPFTAILGGVKVSDKINVINNLLEKVDTLIIGGGMSYTFARAQGYTIGTSVVEEDKIEYAKEMIDKAKEKGIKLLLPIDRVVTDKFDESAEPILEDDKNIKDGYMGM 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_GEOSM (Phosphoglycerate kinase OS=Geobacter sp. (strain M21) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.024e-67
Identity = 127/243 (52.26%), Postives = 170/243 (69.96%), Query Frame = 1
Query:    7 AKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            AK+IL+SHLGRPKG    KYS+ P   RLS LLG EVK+A+DCIG+EV+ M+  +  G V++LENVRF+  EEKND +FAK LA+  D+YVNDAF  +HRAHAS E +        AGFLM+ E++Y   A+ NP +P  AI+GG+KVS KI V+E+L +KVD +++GGGM FTF K  G++VG SLVE++ +D      EKA+++GV   LP D V+AD+F   A ++  P   IP+GWM L
Sbjct:   54 AKIILASHLGRPKGERKEKYSMAPAAKRLSRLLGKEVKLASDCIGDEVKAMINAMQPGDVIMLENVRFYAGEEKNDADFAKALANDCDVYVNDAFAVSHRAHASVEAITNCFPVVAAGFLMKNEMNYFEKAMKNPIRPLVAILGGAKVSGKIEVLENLCDKVDKIIIGGGMAFTFLKGMGYNVGKSLVEDNLIDTAMKTYEKARAQGVKFYLPVDCVVADQFNPAAETKVCPIQEIPEGWMAL 296          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_GEOBB (Phosphoglycerate kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.024e-67
Identity = 127/243 (52.26%), Postives = 170/243 (69.96%), Query Frame = 1
Query:    7 AKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            AK+IL+SHLGRPKG    KYS+ P   RLS LLG EVK+A+DCIG+EV+ M+  +  G V++LENVRF+  EEKND +FAK LA+  D+YVNDAF  +HRAHAS E +        AGFLM+ E++Y   A+ NP +P  AI+GG+KVS KI V+E+L +KVD +++GGGM FTF K  G++VG SLVE++ +D      EKA+++GV   LP D V+AD+F   A ++  P   IP+GWM L
Sbjct:   54 AKIILASHLGRPKGERKEKYSMAPAAKRLSRLLGKEVKLASDCIGDEVKAMINAMQPGDVIMLENVRFYAGEEKNDADFAKALANDCDVYVNDAFAVSHRAHASVEAITNCFPVVAAGFLMKNEMNYFEKAMKNPIRPLVAILGGAKVSGKIEVLENLCDKVDKIIIGGGMAFTFLKGMGYNVGKSLVEDNLIDTAMKTYEKARAQGVKFYLPVDCVVADQFNPAAETKVCPIQEIPEGWMAL 296          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_EXIS2 (Phosphoglycerate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.024e-67
Identity = 132/246 (53.66%), Postives = 179/246 (72.76%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAAD--ANSRXVPSTAIPDGWMGL 732
            GAKVIL+SH+GRPKG   P++SL P+V RLSELLG ++K+  +  G   E+ V+++ EG V++LENVRF+  E KNDPE A+  A LAD++VNDAFG+AHRAHASTEG+A  ++ +VAG L++KEL  L  A+SNP +PF AI+GGSKV+ KIGVI+ LL+ VD L++GGG+ +TF KAQG+ VG+SL+E DK++     M+KA+ KGV  L+P D VI  +F  +    SR + S  IP   M L
Sbjct:   51 GAKVILASHMGRPKGEKNPEFSLAPVVARLSELLGKDIKLVEEAYGPVAEEAVSKLEEGDVIVLENVRFYPGETKNDPELAEGFAKLADVFVNDAFGAAHRAHASTEGIAHHVETAVAGLLIEKELQVLGKALSNPDRPFTAIIGGSKVADKIGVIDHLLDIVDTLIIGGGLSYTFLKAQGYEVGTSLLEVDKIEQAKEFMKKAEDKGVKFLMPVDCVITKEFGEETYVGSRDIDS--IPADHMSL 294          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOBB (Phosphoglycerate kinase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.024e-67
Identity = 133/247 (53.85%), Postives = 176/247 (71.26%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKGVT-PKYSLKPLVPRLSELLGVEVKMA--NDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            +GAKVIL SH+G+PKG   P+ SL P+  RLSELLG E+K A  N  +GE  +  VAE+ +G V+LLEN R+ KEE KN  EF+K+LASLA+++VNDAFG+AHRAH ST GV  ++  +V G+L+QKEL +L  AV  P+KPF AI+GG+KVS KI VI +LL+KVD +++GGGM +TF KAQG+ +G+SLVEED+LD    ++ KA+ K V  LLP D  +A +F  D  +       IP G MGL
Sbjct:   52 NGAKVILCSHMGKPKGEPKPELSLAPVAKRLSELLGKEIKFAPDNTVVGENAKAAVAEMKDGDVVLLENTRYRKEETKNGEEFSKELASLAEIFVNDAFGTAHRAHCSTVGVTDYIDTAVCGYLIQKELKFLGNAVETPEKPFVAILGGAKVSDKIAVINNLLDKVDTIIIGGGMAYTFLKAQGYEIGTSLVEEDRLDYAKEMIAKAEEKSVKFLLPVDHRVAAEF-KDVEATVTNDQNIPTGNMGL 297          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOBM (Phosphoglycerate kinase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.256e-67
Identity = 128/246 (52.03%), Postives = 177/246 (71.95%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPK-YSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAK+IL SH+G+PKG   K  SL P+  RLSE+L  EV  A+D   +GE  +K V ++ +G ++LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF K+ G++VG SL+EEDK++    ++ KAK KGV+ LLP D+ IAD+F  DA         + +G+MGL
Sbjct:   53 GAKIILCSHMGKPKGEPKKELSLLPVAKRLSEMLNKEVVFADDDNVVGENAKKAVEDMKDGDIVLLQNTRYRKEETKNEEIFSKELASLADVFVNDAFGTAHRAHCSTVGVTHYLKEAACGYLIQKELKFLGNAVETPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKSLGYTVGDSLLEEDKVEYAKEMINKAKEKGVNFLLPVDITIADRFDKDAEPIVTEDQNVKEGYMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_FINM2 (Phosphoglycerate kinase OS=Finegoldia magna (strain ATCC 29328) GN=pgk PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.171e-66
Identity = 130/239 (54.39%), Postives = 180/239 (75.31%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKGVT-PKYSLKPLVPRLSELLGVEVK------MANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXV 696
            + AKVIL SHLGRPKG   P++SLKP+  +LSE++G +VK      + +D + EE +K+  +     ++L++N RF KEEEKND  F+K+L+ LADLYVNDAFG++HRAHAS  GV+KFL PS  GFL+QKE++ +  A+ NP++PF AI+GG+KVS KIGVIE+LL+KVD +L+GG M FTF K+QG +VG SL+EEDKLDL  SL+EKA+ KGV + LP D V+A +   +++S+ +
Sbjct:   50 NNAKVILMSHLGRPKGEPKPEFSLKPVAQKLSEMIGQDVKFIDSDKVVDDSVIEESKKLQPK----EIMLIQNTRFRKEEEKNDQTFSKELSQLADLYVNDAFGTSHRAHASNVGVSKFL-PSAVGFLVQKEIEIMGKALENPERPFTAILGGAKVSDKIGVIENLLDKVDTILIGGAMAFTFIKSQGKNVGKSLIEEDKLDLAKSLLEKAQEKGVKIFLPVDFVVAKEMTEESDSKVI 283          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BORRA (Phosphoglycerate kinase OS=Borrelia recurrentis (strain A1) GN=pgk PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.171e-66
Identity = 127/244 (52.05%), Postives = 179/244 (73.36%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GA+V+L SHLGRPKG    +YSL P+  RLSELLG +VKM +DCIG+EV   V+ +  G V+LLENVRF+KEEE+N   FA +L+   D++VNDAFG+AHRAHAST GVA +L P+V GFLM++E ++L   + NP+ PF +I+GGSKVS+KI V+ESLL K +++++GGGM +TF K +G+S+G SL+E + +D+ +S ++KAK   V ++LP D V+A +F   +    V S  IPD  +G+
Sbjct:   51 GARVVLMSHLGRPKGEKNLRYSLMPIARRLSELLGQDVKMLSDCIGDEVVTAVSCMQNGDVVLLENVRFYKEEEENSDAFAMQLSKSGDIFVNDAFGTAHRAHASTSGVASYL-PAVGGFLMEREDEFLGKILKNPESPFVSIIGGSKVSSKIAVLESLLPKSNVMVIGGGMAYTFLKVEGYSIGKSLLENEYIDVASSFLKKAKELSVEVILPIDHVVASEFQEYSMPEYVDSVNIPDSKIGM 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BORT9 (Phosphoglycerate kinase OS=Borrelia turicatae (strain 91E135) GN=pgk PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.997e-66
Identity = 128/244 (52.46%), Postives = 179/244 (73.36%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GA+VIL SHLGRPKG    KYSL P+  RLSELLG +VKM  DCIG+EV   V+ +  G ++LLEN+RF+KEEE+N   F +KL+   D++VNDAFG+AHRAHAST G+A +L P+V GFLM+KE ++L   + NP+ PF AI+GGSKVS+KI V+ESLL K +++++GGGM +TF K +G+S+G SL+E + +D+ +S ++KAK   V ++LP D V+A +F  D+    V S  IP+  +G+
Sbjct:   51 GARVILMSHLGRPKGEKNLKYSLMPVAKRLSELLGQDVKMLPDCIGDEVATTVSCMKNGDIVLLENLRFYKEEEENCDAFVRKLSQNGDIFVNDAFGTAHRAHASTAGLAAYL-PAVGGFLMEKEDEFLGKILRNPESPFVAIIGGSKVSSKIAVLESLLPKSNVMVIGGGMAYTFLKVEGYSIGQSLLENEYIDVASSFLKKAKELDVKVILPLDHVVASEFREDSIPEYVDSVDIPNDKVGM 293          
The following BLAST results are available for this feature:
BLAST of FC930695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOK53.081e-6753.04Phosphoglycerate kinase OS=Clostridium kluyveri (s... [more]
PGK_CLOK13.081e-6753.04Phosphoglycerate kinase OS=Clostridium kluyveri (s... [more]
PGK_GEOSM4.024e-6752.26Phosphoglycerate kinase OS=Geobacter sp. (strain M... [more]
PGK_GEOBB4.024e-6752.26Phosphoglycerate kinase OS=Geobacter bemidjiensis ... [more]
PGK_EXIS24.024e-6753.66Phosphoglycerate kinase OS=Exiguobacterium sibiric... [more]
PGK_CLOBB4.024e-6753.85Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBM5.256e-6752.03Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_FINM21.171e-6654.39Phosphoglycerate kinase OS=Finegoldia magna (strai... [more]
PGK_BORRA1.171e-6652.05Phosphoglycerate kinase OS=Borrelia recurrentis (s... [more]
PGK_BORT91.997e-6652.46Phosphoglycerate kinase OS=Borrelia turicatae (str... [more]

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Properties
Property NameValue
Genbank descriptionC34010C09EF PostHarvC1 Citrus clementina cDNA clone C34010C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930695 ID=FC930695; Name=FC930695; organism=Citrus clementina; type=EST; length=733bp
CATGGCGCCAAAGTCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGT
TACACCCAAGTACAGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTC
TTGGAGTTGAGGTTAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAA
AAAATGGTGGCTGAAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGT
GAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGC
TAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCAT
AGAGCCCATGCTTCCACTGAGGGTGTAGCTAAGTTCTTGAAGCCTTCTGT
GGCTGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTT
CAAATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCA
ACTAAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATT
GCTCGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTG
TTGGTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTT
ATGGAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGT
TGTTATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAGGNTGGTGCCCA
GCACGGCAATTCCAGATGGTTGGATGGGCTTGG
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