FC930695

Overview
NameFC930695
Unique NameFC930695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14268 contig Ccv1_Contig14268:264..996. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.871e-86
Identity = 165/244 (67.62%), Postives = 191/244 (78.28%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL SH+GRP G V     L P+  RLSELLG EV M  DCIGE V   ++++  G V LLEN+RFH EEE NDP+FAKKLA+ ADLYVNDAFG+AHRAHASTEGV  +L PSVAG+L++KEL+YL  A+  P++P AAI+GGSKVS+KIGVIE+LLEK D LL+GGGMIFTFYKA+G SVG SLVEEDKL+L  SL  KAK KGV  LLPTDVV+ADKF  DA S+ V    IPDGWMGL
Sbjct:   56 GAKVILCSHMGRPDGQVKENLRLTPVAKRLSELLGQEVIMCPDCIGEGVTAAISQMSNGQVALLENLRFHGEEEANDPDFAKKLAANADLYVNDAFGTAHRAHASTEGVTHYLSPSVAGYLIEKELNYLQAAIETPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKAKEKGVEFLLPTDVVLADKFDKDAESQIVKVENIPDGWMGL 299          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.055e-86
Identity = 166/244 (68.03%), Postives = 187/244 (76.64%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL SH GRPKG       L P+  RLSELLG  V    D +G   E  VA    G V+LLENVRFH EEE ND EFAK LASLAD+YVNDAFG+AHRAHAST GV ++L P VAG+L++KEL YL  A+ NP++P AAIVGGSKVS+KIGVIE+LL+K D LL+GGGMIFTFYKAQG SVG SLVEEDKLDL  SLM KA+ KGV LLLP DVV+ADKFA DAN++ V   AIPDGWMGL
Sbjct:   55 GAKVILVSHFGRPKGKPVESMRLTPVAERLSELLGRPVVKTTDAVGAGAEAQVAATSNGQVVLLENVRFHAEEEANDAEFAKALASLADIYVNDAFGAAHRAHASTAGVTEYLSPCVAGYLLEKELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.055e-86
Identity = 163/244 (66.80%), Postives = 191/244 (78.28%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL SH GRPKG V     L P   RLSELLG +V M +DC+G  V + V ++  G V LLEN+RFH EEE NDPEF+K+LA+ ADLYVNDAFG+AHRAHASTEGV  +L PSVAG+L++KEL+YL  A+ NP++P AAI+GGSKVS+KIGVIE+LLEK D LL+GGGMIFTFYKA+G SVG SLVEEDKL+L  SL  KA  KGV LLLPTDVV+AD F A+AN + V    IPDGWMGL
Sbjct:   55 GAKVILCSHFGRPKGKVVESMRLTPTAKRLSELLGQDVVMCDDCVGASVTEAVNKLENGQVALLENLRFHAEEEGNDPEFSKQLAANADLYVNDAFGTAHRAHASTEGVTHYLSPSVAGYLIEKELNYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKASEKGVQLLLPTDVVVADAFDANANDKTVKIEEIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.603e-86
Identity = 164/244 (67.21%), Postives = 190/244 (77.87%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVILS+H GRPKG V     L P+  RLSELLG  V   + CIG + E  V  +  G V+LLENVRF  EEEKN+  FA+KLA LA++YVNDAFG+AHRAHASTEGV KFLKPSVAGFLM+KEL YL GAV  PK+P AAIVGGSKVS+KIGV+++L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+ GV LLLPTDVV+AD FA DANS+     AIPDGWMGL
Sbjct:   55 GAKVILSAHFGRPKGQVNDAMRLTPVAARLSELLGKPVAKTDSCIGPDAEAKVGAMANGDVVLLENVRFFAEEEKNEAGFAEKLAGLAEVYVNDAFGAAHRAHASTEGVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLDTLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKANGVQLLLPTDVVLADNFAPDANSQTADINAIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.471e-85
Identity = 162/244 (66.39%), Postives = 191/244 (78.28%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GA+VILS+H GRPKG +     L P+  RLSELLG  V     C+G + E  V  + +G V+LLENVRF  EEEKND  FA+KLA+LAD YVNDAFG+AHRAHASTEGV KFL PSVAG LM+KEL YL GA+ +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD F+ DANS+ V   AIPDGWMGL
Sbjct:   55 GARVILSAHFGRPKGQINEGMRLTPVAKRLSELLGKTVIKTESCVGSDAEAKVNAMADGDVVLLENVRFFSEEEKNDANFAQKLAALADAYVNDAFGAAHRAHASTEGVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFSPDANSQTVSIDAIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.921e-85
Identity = 163/243 (67.08%), Postives = 189/243 (77.78%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL SH GRPKGV  K  L P+  RLSELL   V   +DCIG+ V      +  G V LLENVRFH  EEKNDPEFAK+LA+ A++YVNDAFG+AHRAHAST GV ++L P VAGFLM+KEL+YL  A+ +P++P AAIVGGSKVS+KIGVIE+LLEKVD LL+GGGMIFTFYKA+G +VG SLVEEDKL+L   L  KA+ KGV LLLPTDVV+AD FA DANS+ V   AIPD WMGL
Sbjct:   55 GAKVILVSHFGRPKGVDEKLRLTPVAQRLSELLHKPVAKLDDCIGDAVIAHTQAMANGDVCLLENVRFHPGEEKNDPEFAKQLAACAEVYVNDAFGTAHRAHASTAGVTQYLSPCVAGFLMEKELEYLQNAIEHPRRPLAAIVGGSKVSSKIGVIEALLEKVDKLLIGGGMIFTFYKARGLNVGKSLVEEDKLELAKHLETKAQEKGVELLLPTDVVVADNFANDANSQVVSIEAIPDDWMGL 297          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNP6 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.921e-85
Identity = 165/244 (67.62%), Postives = 186/244 (76.23%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL SH GRPKG       L P+  RLSELLG  V    D +G   E  VA    G V+LLENVRFH EEE ND EFAK LASLAD+YVNDAFG+AHRAHA T GV ++L P VAG+L++KEL YL  A+ NP++P AAIVGGSKVS+KIGVIE+LL+K D LL+GGGMIFTFYKAQG SVG SLVEEDKLDL  SLM KA+ KGV LLLP DVV+ADKFA DAN++ V   AIPDGWMGL
Sbjct:   55 GAKVILVSHFGRPKGKPVESMRLTPVAERLSELLGRPVVKTTDAVGAGAEAQVAATSNGQVVLLENVRFHAEEEANDAEFAKALASLADIYVNDAFGAAHRAHAPTAGVTEYLSPCVAGYLLEKELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.921e-85
Identity = 160/244 (65.57%), Postives = 191/244 (78.28%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL SH GRPKG V     L P+  RLSELLG  V M +DCIG+ V   + ++  G V LLEN+RFH EEE NDPEFA+KLA+ ADLYVNDAFG+AHRAHASTEGV  +L P+VAG+L++KEL+YL  A+ NP++P  AI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G +VG SLVE+DKL+L  SL  KAK KGV  LLPTDVV+AD FA DAN++ V   AI DGWMGL
Sbjct:   54 GAKVILCSHFGRPKGQVVESMRLTPVATRLSELLGQPVVMCDDCIGDSVTAAINQLQNGQVALLENLRFHAEEEANDPEFAQKLAANADLYVNDAFGTAHRAHASTEGVTHYLSPNVAGYLIEKELNYLQAAIENPQRPLVAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEDDKLELAKSLEAKAKEKGVDFLLPTDVVLADNFAPDANAKTVSIDAIEDGWMGL 297          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.509e-85
Identity = 165/253 (65.22%), Postives = 194/253 (76.68%), Query Frame = 1
Query:    4 GAKVILSSHLGRP----------KGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SHLGRP          +      SL P+  RL++LLG  V  A DCIG E E +V+ +  G V LLENVRFH EEE NDPEFA+KLASLADL+VNDAFGSAHRAHAST GV  +L+P+VAG+L++KEL +L GA+ NP++P AAI+GGSKVSTKIGVIE LLEKVD LLLGGGMIFTFY+AQG   G SLVE DKLDL  SLMEKAK++GV LLLP DVV+AD+F  DAN++ V   AIP+ WMGL
Sbjct:   57 GAKVILTSHLGRPIQKDKATGAIQIAREGNSLAPVAVRLAQLLGQPVAFAPDCIGPEAEAVVSSLENGQVALLENVRFHPEEEANDPEFARKLASLADLFVNDAFGSAHRAHASTAGVTAYLQPAVAGYLVEKELQFLSGAIENPQRPLAAIIGGSKVSTKIGVIERLLEKVDKLLLGGGMIFTFYQAQGIPTGKSLVETDKLDLARSLMEKAKARGVELLLPVDVVVADRFDKDANAQTVSIHAIPEDWMGL 309          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.509e-85
Identity = 162/244 (66.39%), Postives = 190/244 (77.87%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GA+VILS+H GRPKG +     L P+  RLSELLG  V     C+G + E  V  + +G V+LLENVRF  EEEKND  FA+KLA+LAD YVNDAFG+AHRAHASTEGV KFL PSVAG LM+KEL YL GA+ +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD FA  ANS+ V   AIPDGWMGL
Sbjct:   55 GARVILSAHFGRPKGQINEGMRLTPVAKRLSELLGKNVTKTESCVGSDAEAKVNAMADGDVVLLENVRFFSEEEKNDANFAQKLAALADAYVNDAFGAAHRAHASTEGVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGL 298          
The following BLAST results are available for this feature:
BLAST of FC930695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_MICAN3.871e-8667.62Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_SYNE75.055e-8668.03Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_CYAP75.055e-8666.80Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNSC6.603e-8667.21Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROM31.471e-8566.39Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_THEEB1.921e-8567.08Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_SYNP61.921e-8567.62Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_CYAP81.921e-8565.57Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNJA2.509e-8565.22Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROMM2.509e-8566.39Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionC34010C09EF PostHarvC1 Citrus clementina cDNA clone C34010C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930695 ID=FC930695; Name=FC930695; organism=Citrus clementina; type=EST; length=733bp
CATGGCGCCAAAGTCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGT
TACACCCAAGTACAGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTC
TTGGAGTTGAGGTTAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAA
AAAATGGTGGCTGAAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGT
GAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGC
TAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCAT
AGAGCCCATGCTTCCACTGAGGGTGTAGCTAAGTTCTTGAAGCCTTCTGT
GGCTGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTT
CAAATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCA
ACTAAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATT
GCTCGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTG
TTGGTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTT
ATGGAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGT
TGTTATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAGGNTGGTGCCCA
GCACGGCAATTCCAGATGGTTGGATGGGCTTGG
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