FC930695

Overview
NameFC930695
Unique NameFC930695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_PROM0 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=pgk PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.425e-80
Identity = 155/245 (63.27%), Postives = 186/245 (75.92%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            H AKVIL++H GRPKG V  K  L P+  RLSELLG  V + N CIG+E       +    VLLLENVRF  EEEKND EFA+KLAS AD+YVNDAFG+AHRAHAST+GV  +L PSVAGFL++KEL YL GAV +P +P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+A++F+ DA S+     +I   WMGL
Sbjct:   54 HSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQSVALTNSCIGDEAVAKSNSLSNRDVLLLENVRFFGEEEKNDLEFAQKLASHADMYVNDAFGAAHRAHASTQGVTNYLSPSVAGFLLEKELKYLQGAVDSPNRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLELAKDLEAKAKAKGVELLLPTDVVLANEFSPDAESKISQIDSISGNWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 9.235e-80
Identity = 151/245 (61.63%), Postives = 190/245 (77.55%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            + AKVIL++H GRPKG V  +  L P+  RLSE+LG +V +   CIGEE  +    +  G VLLLENVRF++EEEKND  FAK LA+ AD+YVNDAFG+AHRAHAST+GV KFL+PSVAGFL++KEL YL GA+  P +P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L  +L EKAK+KGV LLLP+DVV+A++F+  A S+     +I   WMGL
Sbjct:   54 NSAKVILAAHFGRPKGKVNERMRLTPIAARLSEILGKKVNLTESCIGEEALEKSNNLNNGDVLLLENVRFYEEEEKNDLNFAKNLAAHADMYVNDAFGAAHRAHASTQGVTKFLEPSVAGFLLEKELKYLQGAIDAPNRPLAAIVGGSKVSSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEEKAKTKGVELLLPSDVVLANEFSPTAESKVSQIDSISGDWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CARHZ (Phosphoglycerate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=pgk PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.575e-79
Identity = 153/244 (62.70%), Postives = 192/244 (78.69%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAK+I++SHLGRPKG    KYSLKP+  RL+ELLG+EVKMA D +G EVEKM  E+  G VLLLENVRF+ EEEKNDPEFA+KLA LA+++V+DAFG+AHRAHAST G+A +L P+VAGFLM+KE+++L  A++NP++PF AI+GG+KVS KIGVIE+LL KVD+LL+GGGM  TF KA G+  G SLVEEDK++L   LM KAK  GV LLLP+DVV+A +  A   S+ V   +IP   M L
Sbjct:   52 GAKLIVASHLGRPKGQFNEKYSLKPVAKRLAELLGIEVKMAPDVVGPEVEKMAGELRPGEVLLLENVRFYPEEEKNDPEFARKLARLAEIFVSDAFGAAHRAHASTAGIASYL-PAVAGFLMEKEINFLSRALNNPERPFVAIIGGAKVSDKIGVIENLLGKVDVLLIGGGMANTFLKAMGYETGKSLVEEDKVNLAGELMNKAKEVGVKLLLPSDVVVAPRIEAGVPSKIVAVDSIPAEEMAL 294          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_PROMP (Phosphoglycerate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=pgk PE=3 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.687e-79
Identity = 151/245 (61.63%), Postives = 190/245 (77.55%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            + AKVIL++H GRPKG V  K  L P+  RLS++L  +V +   CIGEE       +  G VLLLENVRF++EEEKND +FAK LAS AD+YVNDAFG+AHRAHAST+GV KFL+P+VAGFL++KEL YL GA+  PK+P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L  +L  KAK+KGV LLLP+DV++A++F+ DA S+     AI   WMGL
Sbjct:   54 NSAKVILAAHFGRPKGKVNEKMRLTPVAARLSDILEQKVNLTESCIGEEALAKSNSLNNGEVLLLENVRFYEEEEKNDLDFAKNLASHADMYVNDAFGAAHRAHASTQGVTKFLEPAVAGFLLEKELKYLQGAIDAPKRPLAAIVGGSKVSSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEAKAKNKGVELLLPSDVLLANEFSPDAESKVSQIDAISGDWMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACST (Phosphoglycerate kinase OS=Bacillus stearothermophilus GN=pgk PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 3.509e-79
Identity = 152/245 (62.04%), Postives = 185/245 (75.51%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            HGAKVIL+SHLGRPKG V  +  L  +  RL ELL   V   N+ +G+EV+  V  + EG VLLLENVRF+  EEKNDPE AK  A LADLYVNDAFG+AHRAHASTEG+A +L P+VAGFLM+KEL+ L  A+SNP +PF AI+GG+KV  KIGVI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S MEKAK KGV   +P DVV+AD+FA DAN++ VP  AIP  W  L
Sbjct:   50 HGAKVILASHLGRPKGKVVEELRLDAVAKRLGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSAL 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.818e-79
Identity = 148/244 (60.66%), Postives = 187/244 (76.64%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SH GRPKG V  +  L P+   LS LLG +V+   DC G +VE  V  +  G V+LLENVRFH  EEKNDPE AK  A+LADL+VNDAFG+AHRAHAST G+A+++ P+VAG LM+KE+ ++ GA+SNP++PF AIVGG+KV  KI VIE+LL KVD L++GGGM  TF KAQG+ +G+SL E+DKLDL  +LME+AK +GV LL+P DVV+AD+FAADA  + V   AIP+GWM L
Sbjct:   51 GAKVILASHFGRPKGQVVEEMRLTPVAAHLSSLLGKDVRKLEDCQGADVEAAVERMESGDVILLENVRFHAGEEKNDPELAKSFAALADLFVNDAFGTAHRAHASTAGIAEYI-PAVAGLLMEKEIRFMGGALSNPERPFTAIVGGAKVKDKIAVIENLLTKVDHLIIGGGMANTFLKAQGYGIGASLCEDDKLDLARTLMEQAKERGVQLLMPVDVVVADRFAADAEKQVVAIDAIPEGWMAL 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_PROA2 (Phosphoglycerate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=pgk PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 142/244 (58.20%), Postives = 192/244 (78.69%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            G ++IL SHLGRPKG VTP+ SL P+  RLSELL  +V MAN+CIG E  +    + +G V++LEN+RFH EEEKNDPEFA++LAS+ ++YVNDAFG+AHRAHASTEG+  ++  SVAGFL++KEL YL  A++NP++PF AI+GG+K+S KI V+++L +KVD +L+GG MIFTF+KAQG+ VG+SLVEEDK++L   L+EKA +K + +LLP DV+ A  F+ADA +  VP  +IP+  MGL
Sbjct:   52 GGRLILMSHLGRPKGKVTPELSLAPVARRLSELLDTDVVMANNCIGTEAMQQALALQDGEVMMLENLRFHPEEEKNDPEFARELASMGEIYVNDAFGTAHRAHASTEGICHYVPISVAGFLIEKELRYLGNALANPERPFLAILGGAKISGKIDVLDNLFDKVDTILIGGAMIFTFFKAQGYQVGTSLVEEDKIELAKHLLEKAAAKNIRMLLPEDVIAASAFSADAETATVPIDSIPETMMGL 295          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 146/238 (61.34%), Postives = 189/238 (79.41%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIP 714
            GAKV+L+SHLGRPKG VT +  L P+  RL ELLG EVK A++  G+ V+K ++++ +G VL+LENVRF+  EEKNDPE +K  A LAD+YVNDAFG+AHRAHAST G+A +L P+V+GFLMQKEL+ L  A+SNP +PF AI+GG+KV  KIGVIESLL+KVD L++GGG+ +TF KA GH VG SL+EEDK+DL  S M++AK KGV+ L+PTDV++AD F+ DAN+  VP + IP
Sbjct:   51 GAKVLLASHLGRPKGQVTEELRLTPVAKRLQELLGQEVKKADEAYGDNVKKQISDLKDGDVLVLENVRFYPGEEKNDPELSKAFADLADVYVNDAFGAAHRAHASTAGIAAYL-PAVSGFLMQKELEVLGKAISNPDRPFTAIIGGAKVKDKIGVIESLLDKVDNLIIGGGLAYTFVKALGHEVGKSLLEEDKVDLAKSFMDRAKEKGVNFLIPTDVLVADDFSNDANTSIVPISEIP 287          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.333e-78
Identity = 147/245 (60.00%), Postives = 193/245 (78.78%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            +G ++IL SHLGRPKG V P +SL P+  RLSELL   V MA DCIG EV + V  + +G VL+LEN+RFH EEE NDP+FA++LASL ++YVNDAFG+AHRAHASTEG+  F++ +VAG+L++KEL YL  A+++ ++PF AI+GG+K+S KI V+ESL EKVD +L+GG M+FTF+KAQG  VG+SLVEE+KL+L  SL+EKAK+K V LLLP DVV+A + +ADA SR  P +AI  G +GL
Sbjct:   51 NGGRLILMSHLGRPKGKVNPAFSLSPVAKRLSELLDCPVTMAGDCIGTEVMQQVLALQDGDVLMLENLRFHPEEEANDPDFARELASLGEIYVNDAFGTAHRAHASTEGITHFMQTAVAGYLIEKELRYLGTALNDAQRPFVAILGGAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLVEENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGL 295          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_GEOKA (Phosphoglycerate kinase OS=Geobacillus kaustophilus GN=pgk PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.275e-78
Identity = 151/245 (61.63%), Postives = 184/245 (75.10%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            HGAKVIL+SHLGRPKG V  +  L  +  RL ELL   V   N+ +G+EV+  V  + EG VLLLENVRF+  EEKNDPE AK  A LADLYVNDAFG+AHRAHASTEG+A +L P+VAGFLM+KEL+ L  A+SNP +PF AI+GG+KV  KIGVI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S MEKAK KGV   +P DVV+AD+FA DAN++ V   AIP  W  L
Sbjct:   50 HGAKVILASHLGRPKGKVVEELRLDAVAKRLGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVAIDAIPSDWEAL 293          
The following BLAST results are available for this feature:
BLAST of FC930695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROM01.425e-8063.27Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM59.235e-8061.63Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_CARHZ1.575e-7962.70Phosphoglycerate kinase OS=Carboxydothermus hydrog... [more]
PGK_PROMP2.687e-7961.63Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_BACST3.509e-7962.04Phosphoglycerate kinase OS=Bacillus stearothermoph... [more]
PGK_BREBN7.818e-7960.66Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]
PGK_PROA21.021e-7858.20Phosphoglycerate kinase OS=Prosthecochloris aestua... [more]
PGK_BACP21.021e-7861.34Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_CHLTE1.333e-7860.00Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_GEOKA2.275e-7861.63Phosphoglycerate kinase OS=Geobacillus kaustophilu... [more]

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Properties
Property NameValue
Genbank descriptionC34010C09EF PostHarvC1 Citrus clementina cDNA clone C34010C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930695 ID=FC930695; Name=FC930695; organism=Citrus clementina; type=EST; length=733bp
CATGGCGCCAAAGTCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGT
TACACCCAAGTACAGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTC
TTGGAGTTGAGGTTAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAA
AAAATGGTGGCTGAAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGT
GAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGC
TAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCAT
AGAGCCCATGCTTCCACTGAGGGTGTAGCTAAGTTCTTGAAGCCTTCTGT
GGCTGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTT
CAAATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCA
ACTAAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATT
GCTCGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTG
TTGGTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTT
ATGGAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGT
TGTTATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAGGNTGGTGCCCA
GCACGGCAATTCCAGATGGTTGGATGGGCTTGG
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