FC930695

Overview
NameFC930695
Unique NameFC930695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACHD (Phosphoglycerate kinase OS=Bacillus halodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.889e-74
Identity = 142/244 (58.20%), Postives = 179/244 (73.36%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GA++IL+SHLGRPKG V  +  L P+  RL ELLG  V   N   G E E+   E+ +G VLLLENVRF+  EEKNDPE AK  ASLAD+YVNDAFG+AHRAHASTEG+A  +  +VAG LM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVIE+LL+KVD L++GGG+ +TF KAQGH +G SL+E DK+DL  S MEKAK KGV+  +P D ++AD F+ DAN++ V    IP  W  L
Sbjct:   51 GARIILASHLGRPKGEVVEELRLDPVAARLQELLGKPVAKVNVAHGPEAEQAANELKDGDVLLLENVRFYPGEEKNDPELAKAFASLADVYVNDAFGAAHRAHASTEGIAHHVT-AVAGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIENLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEADKMDLALSFMEKAKEKGVNFYVPQDAIVADDFSNDANTKAVDIDQIPADWEAL 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_PELTS (Phosphoglycerate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pgk PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.203e-73
Identity = 145/243 (59.67%), Postives = 182/243 (74.90%), Query Frame = 1
Query:    7 AKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            A+VIL SHLGRPKG V  +Y + P+  RLSELLG  V  A DC+GE     VA++ +G V+LLENVRFH EEEKND +FA++LA LAD++VNDAFG+AHRAHASTEGVA FL P+VAG LM+KEL+ L   +++P++PFAA+VGGSKVS K+GVI +LL KVD +++GGGM  TF KAQG+SVG SL+E DK+DL   L+ +A+S+ V LLLP DVV+A   A     R VP   IP  WM L
Sbjct:   52 ARVILVSHLGRPKGRVDERYKMDPVARRLSELLGKTVVKAGDCVGEAARSAVAQMQDGDVVLLENVRFHPEEEKNDEKFARQLAELADVFVNDAFGTAHRAHASTEGVAGFL-PAVAGLLMEKELEILGRLLTSPERPFAAVVGGSKVSDKLGVIFNLLTKVDTVIIGGGMANTFLKAQGYSVGKSLLEADKIDLARKLIAEARSREVKLLLPVDVVVAPGPAPGQEQRTVPVDQIPAEWMAL 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_PELPB (Phosphoglycerate kinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.877e-73
Identity = 132/245 (53.88%), Postives = 188/245 (76.73%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            +G ++IL SHLGRPKG V   YSL P+  RL+ELL   V MA +CIG E  + V  + +G V+LLEN+RFH EEE NDP+FA++LASL ++YVNDAFG+AHRAHASTEG+  +++ +VAGFL+++EL YL  A+  P++PF AI+GGSK+S KI V+E+L +KVD +L+GG M+FTF+KAQG+ +G+SLVEE K++L   ++++AK+KG+ LLLP DV++A + +A A+      TAIP+  +G+
Sbjct:   51 NGGRLILMSHLGRPKGKVNADYSLAPVATRLAELLDCPVTMAKECIGTETMQQVLALQDGEVILLENLRFHPEEEANDPDFARELASLGEVYVNDAFGTAHRAHASTEGITHYVQTAVAGFLIERELLYLGKALQEPERPFVAILGGSKISGKIDVLENLFKKVDTVLIGGAMVFTFFKAQGYEIGNSLVEESKIELALKILDEAKNKGIKLLLPVDVIVAPEISATADCHSEMITAIPEEMIGV 295          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_DICT6 (Phosphoglycerate kinase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=pgk PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.758e-73
Identity = 138/226 (61.06%), Postives = 172/226 (76.11%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADA 681
            GAKVIL SHLGRPKG      L P+  RLSELLG  VK  NDCIGEEVEK ++ + EG V+LLEN+RF+KEEE NDPEFAKKLA LADLYVNDAFG+AHRAHAST GVA+++ P VAG LM+KE++ +  A+ +P++PF  I+GG+KVS KIGVI++L+ KVD  L+GGGM+FTF KA G+  G S+VE+DKL+L   +M  AK +GV  LLP D V+  +   DA
Sbjct:   54 GAKVILVSHLGRPKGFQDDLRLDPVAKRLSELLGKPVKKLNDCIGEEVEKEISNMKEGDVVLLENIRFYKEEEANDPEFAKKLAKLADLYVNDAFGTAHRAHASTAGVAQYI-PGVAGLLMKKEIEIMGKALESPERPFICILGGAKVSDKIGVIKNLMTKVDGFLIGGGMMFTFLKALGYETGKSIVEDDKLELAKEIMNMAKERGVEFLLPKDAVVVKEIKEDA 278          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CHLPD (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=pgk PE=3 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.908e-73
Identity = 134/244 (54.92%), Postives = 189/244 (77.46%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            G ++IL SHLGRPKG V  ++SL P+  RLSELL   V MA DCIG EV +    + +G V+LLEN+RFH EEE N+P+FAK+LASL +++VNDAFG+AHRAHASTEG+  ++  +VAG+L++KEL+YL  A+ NP++PF AI+GGSK+S KI V+E+L  KVD +L+GG M+FTF+KAQG +VG+SLVE++KLDL  +L+++A  KG++LLLP DV++A   ++DA+S      ++ DG +G+
Sbjct:   52 GGRLILMSHLGRPKGKVNAEFSLAPVAHRLSELLDTPVAMAKDCIGTEVMQAALALQDGEVMLLENLRFHAEEEANNPDFAKELASLGEIFVNDAFGTAHRAHASTEGITHYVPVAVAGYLIEKELNYLGKALDNPERPFVAILGGSKISGKIDVLENLFTKVDTVLIGGAMVFTFFKAQGLNVGNSLVEDNKLDLAQALLKQAADKGINLLLPDDVLVAATISSDASSHVEAVNSMSDGMIGV 295          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_PROVI (Phosphoglycerate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=pgk PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.865e-72
Identity = 136/245 (55.51%), Postives = 183/245 (74.69%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            +G ++IL SHLGRPKG V P +SL P+  +LSEL+   V MA DCIG EV +    + +G V+LLEN+RFH EEE NDPEFAK+LA+L ++YVNDAFG+AHRAHASTEG+  F+  +VAG+L++KEL YL  A+  P++PF AI+GGSK+S KI V+E+L +KVD +L+GG M+FTF+KA G   GSSLVE++KL+L  SL+E+AK++ + LLLP DV+ A + +ADA    V    +  G MGL
Sbjct:   51 NGGRLILMSHLGRPKGKVNPIFSLAPVAAKLSELIDTPVAMAEDCIGTEVMQSALALQDGEVMLLENLRFHPEEEANDPEFAKELAALGEMYVNDAFGTAHRAHASTEGITHFVPTAVAGYLIEKELMYLGKALEKPERPFVAILGGSKISGKIDVLENLFKKVDTVLIGGAMVFTFFKAMGLETGSSLVEDNKLELALSLLEQAKNRNIKLLLPQDVIAAPELSADAPFHAVSVKELEAGEMGL 295          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_FERNB (Phosphoglycerate kinase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.426e-72
Identity = 140/244 (57.38%), Postives = 177/244 (72.54%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVP-STAIPDGWMG 729
            GAKVIL +HLGRPKG   PKY++KP   RL++LLG EVK      GEEVEK VAE+ EG VL+LEN RF   EEKND E AKK ASLAD++VNDAFG+AHRAH+S  G+A+++ PSVAGFLM+KE+ +L  A  NP KP+  ++GG+KVS KIGVI +LL K D +++GG M+FTF++A G   G+SLVEEDK+DL   L+E+AK KGV L++PTD V A K  A    +       IP+GW G
Sbjct:   51 GAKVILLTHLGRPKGGPDPKYTVKPAAERLAQLLGKEVKFVPALYGEEVEKAVAELKEGEVLMLENTRFDPGEEKNDLELAKKWASLADIHVNDAFGTAHRAHSSNVGIAQYI-PSVAGFLMEKEIKFLSKATHNPDKPYVVVLGGAKVSDKIGVITNLLNKADKIIIGGAMMFTFWRALGKQTGNSLVEEDKIDLAKQLLEQAKEKGVELVIPTDAVCAQKMEAGVEKKVFTCEEGIPEGWAG 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACCN (Phosphoglycerate kinase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pgk PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 7.087e-72
Identity = 137/244 (56.15%), Postives = 181/244 (74.18%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SHLGRPKG V  +  L P+  RL ELLG +VK A++  G  V++MVA + EG +L+LENVRF+  EEKND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+VAGFLM+KEL+ L  A+SNP +PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M  AK KGV+  +P DVVI ++F+  A ++ V   +IP  W G+
Sbjct:   51 GAKVILASHLGRPKGQVVEEMRLTPVAVRLGELLGKDVKKADEAFGPAVQEMVAAMNEGDILVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMALAKEKGVNFYMPVDVVITEEFSETATTKIVDIDSIPSNWEGV 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_ACIBL (Phosphoglycerate kinase OS=Acidobacteria bacterium (strain Ellin345) GN=pgk PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 7.087e-72
Identity = 143/252 (56.75%), Postives = 175/252 (69.44%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELL------GVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXV-PSTAIPDGWMGL 732
            HGAK+IL SHLGRPKG   PK SLKP+  RL  +L      G  V  + DCIG + ++M  ++ +G  LLLENVRFH EEEKNDP FAK+LASL +LYVNDAFGSAHRAHASTEG+  +++ S AG LMQKELDYL  A SNP KPF AI+GG+KVS KIGVI++L+ KVD +++GGGM +TF KAQG  +G SL E DKLDL   ++  A  +G+  LLP D V ADKF   A    +    +IP   M L
Sbjct:   51 HGAKLILCSHLGRPKGKPNPKMSLKPVAERLRVMLDHAISPGQNVGFSPDCIGMQAQEMAKQLEKGQALLLENVRFHAEEEKNDPAFAKELASLCELYVNDAFGSAHRAHASTEGITHYVEKSAAGLLMQKELDYLGKATSNPAKPFVAILGGAKVSDKIGVIQNLMAKVDAIIIGGGMAYTFLKAQGQEIGKSLFEADKLDLAKQILADAHKRGLKFLLPVDHVTADKFDMHATPHQIGEGQSIPAEQMAL 302          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACC1 (Phosphoglycerate kinase OS=Bacillus cereus (strain ATCC 10987) GN=pgk PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 9.256e-72
Identity = 137/244 (56.15%), Postives = 181/244 (74.18%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SHLGRPKG V  +  L P+  RL ELLG +VK A++  G  V++MVA + EG VL+LENVRF+  EEKND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP +PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A ++ V   +IP  W G+
Sbjct:   51 GAKVILASHLGRPKGQVVEEMRLTPVAARLGELLGKDVKKADEAFGPAVQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVNIDSIPSNWEGV 293          
The following BLAST results are available for this feature:
BLAST of FC930695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACHD9.889e-7458.20Phosphoglycerate kinase OS=Bacillus halodurans GN=... [more]
PGK_PELTS2.203e-7359.67Phosphoglycerate kinase OS=Pelotomaculum thermopro... [more]
PGK_PELPB2.877e-7353.88Phosphoglycerate kinase OS=Pelodictyon phaeoclathr... [more]
PGK_DICT63.758e-7361.06Phosphoglycerate kinase OS=Dictyoglomus thermophil... [more]
PGK_CHLPD4.908e-7354.92Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_PROVI1.865e-7255.51Phosphoglycerate kinase OS=Prosthecochloris vibrio... [more]
PGK_FERNB5.426e-7257.38Phosphoglycerate kinase OS=Fervidobacterium nodosu... [more]
PGK_BACCN7.087e-7256.15Phosphoglycerate kinase OS=Bacillus cereus subsp. ... [more]
PGK_ACIBL7.087e-7256.75Phosphoglycerate kinase OS=Acidobacteria bacterium... [more]
PGK_BACC19.256e-7256.15Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionC34010C09EF PostHarvC1 Citrus clementina cDNA clone C34010C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930695 ID=FC930695; Name=FC930695; organism=Citrus clementina; type=EST; length=733bp
CATGGCGCCAAAGTCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGT
TACACCCAAGTACAGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTC
TTGGAGTTGAGGTTAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAA
AAAATGGTGGCTGAAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGT
GAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGC
TAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCAT
AGAGCCCATGCTTCCACTGAGGGTGTAGCTAAGTTCTTGAAGCCTTCTGT
GGCTGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTT
CAAATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCA
ACTAAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATT
GCTCGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTG
TTGGTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTT
ATGGAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGT
TGTTATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAGGNTGGTGCCCA
GCACGGCAATTCCAGATGGTTGGATGGGCTTGG
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