FC930695

Overview
NameFC930695
Unique NameFC930695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14268 contig Ccv1_Contig14268:264..996. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLONN (Phosphoglycerate kinase OS=Clostridium novyi (strain NT) GN=pgk PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.579e-71
Identity = 139/246 (56.50%), Postives = 180/246 (73.17%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL SHLG+PKG   P+ SL P+  RLSELL  EV  A D   +GE  +K VAE+ +G V+LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GVA FL  +  G+L+QKEL +L  AV  P +PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG+++G SLVEEDK++    +M+KAK+KGV LLLP D V+ ++F A+          IP+G+MGL
Sbjct:   53 GAKVILCSHLGKPKGEAKPELSLAPVAKRLSELLEKEVVFAADDTVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNEENFSKELASLADVFVNDAFGTAHRAHCSTVGVADFLNEAACGYLIQKELKFLGDAVETPVRPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTIGKSLVEEDKVEYAKEMMDKAKAKGVKLLLPVDNVVGEEFDANTTPVTTEDANIPEGYMGL 298          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACCZ (Phosphoglycerate kinase OS=Bacillus cereus (strain ZK / E33L) GN=pgk PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.579e-71
Identity = 136/244 (55.74%), Postives = 182/244 (74.59%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SHLGRPKG V  +  L P+  RL ELLG +VK A++  G  V++MVA + EG VL+LENVRF+  EEKND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A ++ V   +IP  W G+
Sbjct:   51 GAKVILASHLGRPKGQVVEEMRLTPVAARLGELLGKDVKKADEAFGPAVQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGV 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACC4 (Phosphoglycerate kinase OS=Bacillus cereus (strain B4264) GN=pgk PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.062e-71
Identity = 136/244 (55.74%), Postives = 181/244 (74.18%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SHLGRPKG V  +  L P+  RL ELLG +VK A++  G   ++MVA + EG VL+LENVRF+  EEKND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A ++ V   +IP  W G+
Sbjct:   51 GAKVILASHLGRPKGQVVEEMRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGV 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACCQ (Phosphoglycerate kinase OS=Bacillus cereus (strain Q1) GN=pgk PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.517e-71
Identity = 136/244 (55.74%), Postives = 180/244 (73.77%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SHLGRPKG V  +  L P+  RL ELLG +VK A++  G   ++MVA + EG VL+LENVRF+  EEKND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP +PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A ++ V   +IP  W G+
Sbjct:   51 GAKVILASHLGRPKGQVVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGV 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACC7 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH187) GN=pgk PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.517e-71
Identity = 136/244 (55.74%), Postives = 180/244 (73.77%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SHLGRPKG V  +  L P+  RL ELLG +VK A++  G   ++MVA + EG VL+LENVRF+  EEKND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP +PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A ++ V   +IP  W G+
Sbjct:   51 GAKVILASHLGRPKGQVVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVNIDSIPSNWEGV 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CLOTE (Phosphoglycerate kinase OS=Clostridium tetani GN=pgk PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.594e-71
Identity = 140/247 (56.68%), Postives = 181/247 (73.28%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKGVTPKY--SLKPLVPRLSELLGVEVKMA--NDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            G KVIL SHLG+PKG  PK   SL P+  RLSELL  EV     N+ +GE  +K V  + +G V+LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GV +F+  SV G+L+QKEL +L  AV NP++PF +I+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG+++GSSL+EEDK+D    ++EKAK KGV LLLP D V A+KFA DA +       I +G+MGL
Sbjct:   56 GGKVILCSHLGKPKG-EPKQELSLAPVAKRLSELLNKEVLFPADNEVVGENAKKAVENMKDGDVILLQNTRYRKEETKNEETFSKELASLADIFVNDAFGTAHRAHCSTVGVTEFVATSVCGYLIQKELKFLGNAVENPQRPFISILGGAKVSDKINVINNLLEKVDTLIIGGGMSYTFQKAQGYTIGSSLLEEDKIDYAKEMIEKAKEKGVKLLLPVDNVAAEKFAEDAEAIITEDQNIKEGYMGL 301          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_CHLAD (Phosphoglycerate kinase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pgk PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 6.000e-71
Identity = 142/244 (58.20%), Postives = 177/244 (72.54%), Query Frame = 1
Query:    1 HGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELL--GVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGW 723
            HGAKVIL SHLGRPKG   PKYSL+P+V RL ELL    EVK      G   E  V+ +  G VL+LEN RF   EE NDP+ A +LA L D++VNDAFG+AHRA+ASTEGVA +L P+VAGFLM+KEL Y+ GA+SNP++PF  ++GG+K+S KIGVIE+LL KVD LL+GGGM  TF  A+G ++G SLVE + + +   LM KA+ +G  LLLP DVVIAD F+A+A  + V  TAIP GW
Sbjct:   51 HGAKVILMSHLGRPKGKPNPKYSLRPVVERLFELLPEATEVKKTEAITGPAAEAAVSMLKPGQVLVLENTRFDPREEANDPQMAAELAKLGDVFVNDAFGTAHRANASTEGVAHYL-PAVAGFLMEKELTYIGGALSNPQRPFVTVIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAKGLNLGDSLVEPESVPVAQQLMAKAEERGARLLLPVDVVIADAFSAEAQRQVVEVTAIPSGW 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_ANADE (Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pgk PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 6.000e-71
Identity = 140/245 (57.14%), Postives = 182/245 (74.29%), Query Frame = 1
Query:    7 AKVILSSHLGRPKGVTP---KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            AKVIL+SHLGRPKG      K +L+P   RLSELL  +V +A+DC+G+ V+K+V ++ +G VLLLEN+RFH EEEKND  FA++LASLAD++VNDAFG+AHRAHAST G+AKF+K   AGFL+QKE++YL  A+ +P +PF AIVGG+KVS KI V+E+L+ K D + +GG M +TF KAQG  VG SLVEEDKL+L   ++E+A+++ V LLLP D V   +    A    V   AIPDG MGL
Sbjct:   53 AKVILASHLGRPKGKPDDRTKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDLKDGHVLLLENLRFHPEEEKNDEAFARELASLADVWVNDAFGTAHRAHASTAGMAKFVKEKAAGFLVQKEVEYLGKALGSPARPFVAIVGGAKVSDKIKVLENLIAKADAVCVGGAMAYTFLKAQGVPVGRSLVEEDKLELARQILERAEARKVDLLLPVDHVCGAEPKETAERVVVNDRAIPDGLMGL 297          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_BACC2 (Phosphoglycerate kinase OS=Bacillus cereus (strain G9842) GN=pgk PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 7.836e-71
Identity = 135/244 (55.33%), Postives = 180/244 (73.77%), Query Frame = 1
Query:    4 GAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            GAKVIL+SHLGRPKG    +  L P+  RL ELLG +VK A++  G   ++MVA + EG VL+LENVRF+  EEKND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A ++ V   +IP  W G+
Sbjct:   51 GAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTQIVGIDSIPSNWEGV 293          
BLAST of FC930695 vs. ExPASy Swiss-Prot
Match: PGK_ANASK (Phosphoglycerate kinase OS=Anaeromyxobacter sp. (strain K) GN=pgk PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 7.836e-71
Identity = 139/245 (56.73%), Postives = 182/245 (74.29%), Query Frame = 1
Query:    7 AKVILSSHLGRPKGVTP---KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSRXVPSTAIPDGWMGL 732
            AKVIL+SHLGRPKG      K +L+P   RLSELL  +V +A+DC+G+ V+K+V ++ +G VLLLEN+RFH EEEKND  FA++LASLAD++VNDAFG+AHRAHAST G+A+F+K   AGFL+QKE++YL  A+ +P +PF AIVGG+KVS KI V+E+L+ K D + +GG M +TF KAQG  VG SLVEEDKL+L   ++E+A+++ V LLLP D V   +    A    V   AIPDG MGL
Sbjct:   53 AKVILASHLGRPKGKPDDRQKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDLKDGHVLLLENLRFHPEEEKNDEAFARELASLADVWVNDAFGTAHRAHASTAGMARFVKEKAAGFLVQKEVEYLGKALGSPARPFVAIVGGAKVSDKIKVLENLIAKADAICVGGAMAYTFLKAQGVPVGKSLVEEDKLELARQILERAEARKVDLLLPVDHVCGAEPKETAERVVVNDRAIPDGLMGL 297          
The following BLAST results are available for this feature:
BLAST of FC930695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLONN1.579e-7156.50Phosphoglycerate kinase OS=Clostridium novyi (stra... [more]
PGK_BACCZ1.579e-7155.74Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC42.062e-7155.74Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACCQ3.517e-7155.74Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC73.517e-7155.74Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_CLOTE4.594e-7156.68Phosphoglycerate kinase OS=Clostridium tetani GN=p... [more]
PGK_CHLAD6.000e-7158.20Phosphoglycerate kinase OS=Chloroflexus aggregans ... [more]
PGK_ANADE6.000e-7157.14Phosphoglycerate kinase OS=Anaeromyxobacter dehalo... [more]
PGK_BACC27.836e-7155.33Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_ANASK7.836e-7156.73Phosphoglycerate kinase OS=Anaeromyxobacter sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC34010C09EF PostHarvC1 Citrus clementina cDNA clone C34010C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930695 ID=FC930695; Name=FC930695; organism=Citrus clementina; type=EST; length=733bp
CATGGCGCCAAAGTCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGT
TACACCCAAGTACAGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTC
TTGGAGTTGAGGTTAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAA
AAAATGGTGGCTGAAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGT
GAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGC
TAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCAT
AGAGCCCATGCTTCCACTGAGGGTGTAGCTAAGTTCTTGAAGCCTTCTGT
GGCTGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTT
CAAATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCA
ACTAAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATT
GCTCGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTG
TTGGTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTT
ATGGAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGT
TGTTATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAGGNTGGTGCCCA
GCACGGCAATTCCAGATGGTTGGATGGGCTTGG
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