FC930697

Overview
NameFC930697
Unique NameFC930697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.325e-36
Identity = 73/132 (55.30%), Postives = 93/132 (70.45%), Query Frame = 2
Query:  113 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPL 508
            ++LH + RVGDLDR+IKFY +  GM+LLR  + PE KY+ AFLG+   +S   +ELTYN+GV  Y+ GT +GH AI  +D+Y   E +RA GGNVTRE GPVKGG+T IAFV+DPDGY  E I+   T   L
Sbjct:    2 QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENKSTKSGL 133          

HSP 2 Score: 70.0922 bits (170), Expect = 1.162e-11
Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 2
Query:  506 LCQVMLRVGDLGRSIKFYKKALGMKLLRTVDKPEYKYTLAMLGYAEGD 649
            +   MLRVGDL RSIKFY+  LGM+LLRT + PEYKYTLA LGY +G+
Sbjct:    3 ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGE 50          
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.360e-33
Identity = 62/125 (49.60%), Postives = 89/125 (71.20%), Query Frame = 2
Query:  113 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 487
            RLLH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.360e-33
Identity = 62/125 (49.60%), Postives = 89/125 (71.20%), Query Frame = 2
Query:  113 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 487
            RLLH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: LGUL_YEAST (Lactoylglutathione lyase OS=Saccharomyces cerevisiae GN=GLO1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.323e-23
Identity = 74/206 (35.92%), Postives = 99/206 (48.06%), Query Frame = 2
Query:  116 LLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-------------QSHFVVELTYNYGV---TSYDIGT-------GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELI---------QRGPTPEPLCQVMLRVGDLGRSIKFYKKALGMKLLRTVDKPEYKYTLAMLGY 637
            L H   RV D  RT+KFYTE FGMKLL ++D  E K+S  FL F  +              +H V+ELT+N+G      Y I         GFGH   +  D+ K  E + ++G    +     +G    IAF   PDGY  ELI          +G         M+R+ +  RS++FY+  LGMKLLRT +    K+TL  LGY
Sbjct:   23 LNHTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSFPKDDIPKNKNGEPDVFSAHGVLELTHNWGTEKNPDYKINNGNEEPHRGFGHICFSVSDINKTCEELESQGVKFKKRLS--EGRQKDIAFALGPDGYWIELITYSREGQEYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGY 226          

HSP 2 Score: 73.559 bits (179), Expect = 1.051e-12
Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = 2
Query:  122 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------HFVVELTYNYGVTS-----YDIGT----GFGHFAIATEDVYKLVENIRAK-GGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG 490
            H + R+ +  R+++FY    GMKLLR  +    K++  FLG+G  ++        V+ELT+N+G  +     Y  G     G+GH  I+ +D   L + I  K G  +   P   +G   +IAF+KDPDGY  E++  G
Sbjct:  185 HTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDDAGALCKEIEVKYGDKIQWSPKFNQGRMKNIAFLKDPDGYSIEVVPHG 323          
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: GLOD4_RAT (Glyoxalase domain-containing protein 4 OS=Rattus norvegicus GN=Glod4 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.706e-21
Identity = 61/190 (32.11%), Postives = 95/190 (50.00%), Query Frame = 2
Query:  110 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYKKALGMKLLRTVDKPEYKYTLAMLGYAE 643
            RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  R   P+      +   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    ++ ++    A+LGYA+
Sbjct:    4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGLTLASSQAV----------SNARRLEWPLSKVAEGVFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKKW----ALLGYAD 179          
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: LGUL_SCHPO (Lactoylglutathione lyase OS=Schizosaccharomyces pombe GN=glo1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 71/203 (34.98%), Postives = 102/203 (50.25%), Query Frame = 2
Query:  113 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQS--HFVVELTYNYGVTS-----YDIGT-----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRVGDLGRSIKFYKKALGMKLLRTVDKPEYKYTLAMLGY 637
            +L H + RV DLD+++KFYTE FGMKL+ +    E ++S +FL F        G E+S    ++ELTYN+G        Y  G      GFGH     +++      + +KG +  ++     G   HIAF  DPD Y  EL+ +  T +P   +        M+RV D   SI FY+K LGMK++   D P  K+T   L Y
Sbjct:   11 KLNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGPGALNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFKKKLS--DGKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAY 209          
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEBR (Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 61/189 (32.28%), Postives = 98/189 (51.85%), Query Frame = 2
Query:  113 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYKKALGMKLLRTVDKPEYKYTLAMLGYAEG 646
            R LH V++V +  +TI FYT+   MK+LR  +             +E++S   +G+G E  HFV+ELTYNY +  Y++G  +    I ++ ++  +  I  +           K G   +A VKDPDG+ F++ +    P+ L +V L VGDL +S K++ + LGM ++      E K T   L + EG
Sbjct:    4 RALHYVFKVANRAKTIDFYTKILEMKVLRHEEFDKGCEASCNGPYDERWSKTMIGYGSEDEHFVLELTYNYPIHKYELGNDYRAIVIDSDQLFDKISRIDHR-----------KSGCGRLA-VKDPDGHEFKIGKADHAPKVL-RVQLNVGDLEKSKKYWNELLGMGIV------EEKKTRVRLSFGEG 173          
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: GLOD4_MOUSE (Glyoxalase domain-containing protein 4 OS=Mus musculus GN=Glod4 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 60/190 (31.58%), Postives = 93/190 (48.95%), Query Frame = 2
Query:  110 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYKKALGMKLLRTVDKPEYKYTLAMLGYAE 643
            RR LH V++V +  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  +   P+      I   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    ++ +     A+LGYA+
Sbjct:    4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGITLASSQAV----------SNARKLEWPLSKVAEGIFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKQ----RALLGYAD 179          
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEEL (Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.813e-19
Identity = 57/189 (30.16%), Postives = 99/189 (52.38%), Query Frame = 2
Query:  113 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYKKALGMKLLRTVDKPEYKYTLAMLGYAEG 646
            R LH V++V +  +TI F+T    MK+LR  +  +            ++S   +G+G E  HFV+E+TYNY +  Y++G  +    I ++ +++ VE I  +           K G   +A VKDPDG+ F++ +   +P+ L +V + VGDL +S K++ + LGM ++      E K +   + Y +G
Sbjct:    4 RALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYGSEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-----------KSGCGRLA-VKDPDGHEFKIGKADQSPKVL-RVQVNVGDLEKSKKYWNETLGMPIV------EEKSSRIRMSYGDG 173          
BLAST of FC930697 vs. ExPASy Swiss-Prot
Match: GLOD4_HUMAN (Glyoxalase domain-containing protein 4 OS=Homo sapiens GN=GLOD4 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.200e-16
Identity = 64/205 (31.22%), Postives = 91/205 (44.39%), Query Frame = 2
Query:  110 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------------------------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYKKALGMKLLRTVDKPEYKYTLAMLGYAE 643
            RR LH V++VG+  +T +FY +  GMK+        E                          K+S   +GFGPE  HFV ELTYNYGV  Y +G  F    +A+               N  +   P+      +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    +K E K   A+LGYA+
Sbjct:    4 RRALHFVFKVGNRFQTARFYRDVLGMKVESCSVARLECSGAISAHCSDYTRITEDSFSKPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAV----------SNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKI---YEKDEEKQR-ALLGYAD 194          
The following BLAST results are available for this feature:
BLAST of FC930697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LGUL_HAEIN2.325e-3655.30Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_NEIMB5.360e-3349.60Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA5.360e-3349.60Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_YEAST1.323e-2335.92Lactoylglutathione lyase OS=Saccharomyces cerevisi... [more]
GLOD4_RAT4.706e-2132.11Glyoxalase domain-containing protein 4 OS=Rattus n... [more]
LGUL_SCHPO8.876e-2034.98Lactoylglutathione lyase OS=Schizosaccharomyces po... [more]
GLOD4_CAEBR1.159e-1932.28Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 ... [more]
GLOD4_MOUSE1.514e-1931.58Glyoxalase domain-containing protein 4 OS=Mus musc... [more]
GLOD4_CAEEL9.813e-1930.16Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 P... [more]
GLOD4_HUMAN1.200e-1631.22Glyoxalase domain-containing protein 4 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC34010C11EF PostHarvC1 Citrus clementina cDNA clone C34010C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930697 ID=FC930697; Name=FC930697; organism=Citrus clementina; type=EST; length=662bp
GACACTTGCGACTTCACTCCGACTTTCTGAGTGATTCCATATCAAAATGG
CTGAGGCTTCTCCTGCTGCTGCTAATGCCGAGTTGCTGGAATGGCCAAAG
AAAGATAAGCGACGCCTCCTTCATGCTGTGTATCGTGTTGGTGATCTTGA
TCGCACCATCAAATTTTACACCGAATGCTTTGGGATGAAGCTGTTGAGAA
AGAGAGACGTCCCGGAAGAGAAATACTCAAATGCCTTTCTTGGATTTGGC
CCCGAACAGTCTCACTTTGTTGTGGAGTTAACGTACAACTATGGTGTAAC
TTCATATGATATTGGAACTGGTTTTGGCCATTTTGCAATTGCAACTGAAG
ATGTTTACAAACTGGTTGAAAACATTCGTGCCAAGGGTGGCAATGTCACT
AGAGAGCCTGGTCCAGTTAAAGGTGGAACAACTCACATTGCCTTTGTGAA
GGATCCCGATGGTTATATTTTTGAACTCATCCAGAGAGGTCCAACTCCTG
AACCACTCTGTCAAGTAATGCTTCGCGTTGGCGATCTTGGTCGCTCCATC
AAGTTCTATAAAAAGGCTTTGGGGATGAAACTGTTAAGGACAGTTGATAA
ACCTGAATACAAGTACACCCTGGCCATGCTTGGATATGCTGAAGGAGATC
AGACTACTGTTC
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