FC930698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAAS (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MSSA476) GN=clpC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAAR (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MRSA252) GN=clpC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAAN (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain N315) GN=clpC PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAAM (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpC PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAAC (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain COL) GN=clpC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAAB (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAA8 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain NCTC 8325) GN=clpC PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAA3 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain USA300) GN=clpC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 80/152 (52.63%), Postives = 102/152 (67.11%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKV--------TMQVARDQVLQE-----VRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTDA 418 QLTEAVRRRPYSV+LFDEVEKAH VFN LQ+LDDGRLTDGQGR VDFRNT+IIMTSN+G+EH+LS + Q +Q L E + +FRPE LNR+DE+++F L+ + ++ +Q++ V RL R + L V DA Sbjct: 665 QLTEAVRRRPYSVLLFDEVEKAHQDVFNIFLQILDDGRLTDGQGRVVDFRNTIIIMTSNIGSEHILSARESRTHTSDLPVPETQSTEEQTLPEQIRGLLHTYFRPEFLNRIDEVLIFKRLTRKHIRLITDIQLQMVVERLESRHIKLRVRDA 816
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 1.488e-35 Identity = 69/137 (50.36%), Postives = 105/137 (76.64%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVT 412 QLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD +GRTVDF+NT++I+TSN+G++++L + R +V + +R +FRPE LNR+DE ++F L +QL++ R+Q+ + RL++R ++L+++ Sbjct: 667 QLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKNTILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMS 803 The following BLAST results are available for this feature:
BLAST of FC930698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930698 ID=FC930698; Name=FC930698; organism=Citrus clementina; type=EST; length=420bpback to top |