FC930698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.944e-35 Identity = 76/145 (52.41%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNTVIIMTSN+GA+ L G + R +++E++ FRPE LNR+D+I+VF L+ ++LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.944e-35 Identity = 76/145 (52.41%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNTVIIMTSN+GA+ L G + R +++E++ FRPE LNR+D+I+VF L+ ++LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.944e-35 Identity = 77/138 (55.80%), Postives = 100/138 (72.46%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL--LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVT 412 LTEA+RR+PYSVVL DEVEKAH VFN LLQVL+DGRLTD GRTVDFRNTV++MTSNLG+ + L+G + R V+ V HFRPE +NR+DE+VVF+PL+ EQ+ +Q+ + RLAER ++L ++ Sbjct: 662 LTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQELAG-----DREAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELS 794
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB2_ANASP (Chaperone protein clpB 2 OS=Anabaena sp. (strain PCC 7120) GN=clpB2 PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 1.944e-35 Identity = 68/138 (49.28%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE +RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG TVDF+NT+IIMTSN+G++++L R +V++ +R FRPE LNR+DE+++F L ++L++ +LQ++ + RL +R ++L ++D Sbjct: 667 QLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTIIIMTSNIGSQYILDIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDEVIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSD 804
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_PSEPK (Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.655e-35 Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVT 412 LTEAVRR+PYSVVL DEVEKAH VFN LLQVL+DGRLTD GRTVDFRNTVI+MTSNLG+ + ++G + R V+ V HFRPE +NR+DE+VVF+PL EQ+ +Q+ + RL ER ++L+++ Sbjct: 662 LTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQ-IQELVG--DREAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLS 794
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.655e-35 Identity = 73/138 (52.90%), Postives = 98/138 (71.01%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF NTV+I+TSN+G++ +L + +V + HFRPE LNRLDE ++F L E+L++ LQ+ + RL +R + L ++D Sbjct: 667 QLTEAVRRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSILDLGGDDSQYREMERRVHDALHAHFRPEFLNRLDETIIFHSLRREELRQIVALQVNRLRERLCDRKLGLEISD 804
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.386e-35 Identity = 74/148 (50.00%), Postives = 108/148 (72.97%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQ-----------VLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVT 412 QLTE+VRRRPY+VVLFDE+EK H VFN LLQ+L+DGRLTD +GRTVDF+NT++I+TSN+G++ + G G + ++ DQ V +E++++FRPE LNRLDEI+VF L+ +++ E + +K+V R++E+G+ L VT Sbjct: 602 QLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLILTSNVGSKVIEKG-GGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVT 748
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_TROWT (Chaperone protein clpB OS=Tropheryma whipplei (strain Twist) GN=clpB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.386e-35 Identity = 75/138 (54.35%), Postives = 100/138 (72.46%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE+VRRRPYSVVLFDE EKAH VF+ LLQVLD+GRLTD GRTVDFRNT+I++TSN+G+ +L + T A + V EVR+ FRPE LNRLDEIV+F+PLS + + L ++ + R+ +R + + V++ Sbjct: 509 QLTESVRRRPYSVVLFDEAEKAHPEVFDILLQVLDEGRLTDSHGRTVDFRNTIIVLTSNIGSRYLSDISLEATT---AHEYVNDEVRRTFRPEFLNRLDEIVIFEPLSQSDICQIVDLNIESLNKRIKDRRIVVTVSE 643
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_TROW8 (Chaperone protein clpB OS=Tropheryma whipplei (strain TW08/27) GN=clpB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.386e-35 Identity = 75/138 (54.35%), Postives = 100/138 (72.46%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE+VRRRPYSVVLFDE EKAH VF+ LLQVLD+GRLTD GRTVDFRNT+I++TSN+G+ +L + T A + V EVR+ FRPE LNRLDEIV+F+PLS + + L ++ + R+ +R + + V++ Sbjct: 503 QLTESVRRRPYSVVLFDEAEKAHPEVFDILLQVLDEGRLTDSHGRTVDFRNTIIVLTSNIGSRYLSDISLEATT---AHEYVNDEVRRTFRPEFLNRLDEIVIFEPLSQSDICQIVDLNIESLNKRIKDRRIVVTVSE 637
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_DICNO (Chaperone protein clpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 7.386e-35 Identity = 75/137 (54.74%), Postives = 102/137 (74.45%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 LTEAVRR+PYSVVLFDEVEKAH VFNTLLQVLD+GRLTDGQGRTVDFR+TVIIMTSNLG++ + ++ + + + + V++ V HFRPE +NR+DE +VF L+ + ++Q++ + RL R + L+V + Sbjct: 667 LTEAVRRKPYSVVLFDEVEKAHSDVFNTLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSD--MIQLLAEKSYEEMKSAVMEIVMAHFRPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEE 801 The following BLAST results are available for this feature:
BLAST of FC930698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930698 ID=FC930698; Name=FC930698; organism=Citrus clementina; type=EST; length=420bpback to top |