FC930698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_CLOTE (Chaperone protein clpB OS=Clostridium tetani GN=clpB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.386e-35 Identity = 68/138 (49.28%), Postives = 101/138 (73.19%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF+N +IIMTSN+G+ +LL + +++V ++ F+PE LNRLD+I++F PL++ ++ + + ++D+ RL +R + L VT+ Sbjct: 667 QLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDFKNCIIIMTSNIGSSYLLENKKEDGIDETVKNKVSNALKDRFKPEFLNRLDDIIMFKPLTNREITKIIDIFLQDIENRLKDRNITLIVTE 804
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_CLOAB (Chaperone protein clpB OS=Clostridium acetobutylicum GN=clpB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.386e-35 Identity = 66/138 (47.83%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTEAVRR+PYSV+LFDE+EKAH VFN LQ+ DDGRLTD +G T+DF+N++IIMTSN+G+EHLL+ + +D+V+ E++ F+PE LNRLD+I++F PLS ++ + + ++++ +L E+ + + + + Sbjct: 667 QLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDFKNSIIIMTSNIGSEHLLNNKGVSNVDEETKDKVMNELKGRFKPEFLNRLDDIIMFKPLSINEIGKIIDIFLENIKSKLKEKNIKIDIAE 804
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_BLOFL (Chaperone protein clpB OS=Blochmannia floridanus GN=clpB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.386e-35 Identity = 76/130 (58.46%), Postives = 94/130 (72.31%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERG 394 LTE++RRRPYS+VL DE+EKAH+ VFN LLQVLDDGRLTD QGR VDF NTVIIMTSNLG++ L+ + VL V ++FRPE +NR+DEIVVF PLS + L + +Q+K + RL ERG Sbjct: 664 LTESIRRRPYSIVLLDEIEKAHLDVFNILLQVLDDGRLTDNQGRMVDFNNTVIIMTSNLGSD-LIQKKFDISDYDTMKKTVLNVVNQYFRPEFINRIDEIVVFHPLSIKHLIDIANIQLKYLYSRLEERG 792
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_MYCTU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.647e-35 Identity = 76/146 (52.05%), Postives = 103/146 (70.55%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTDA 418 QLTE VRR+P+SVVLFDE+EKAH ++N+LLQVL+DGRLTDGQGRTVDF+NTV+I TSNLG + S G+ + + +V E++KHFRPE LNR+D+I+VF L+ E++ L + VA +L + +AL +TDA Sbjct: 609 QLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDA 754
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_MYCBO (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium bovis GN=clpC PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.647e-35 Identity = 76/146 (52.05%), Postives = 103/146 (70.55%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTDA 418 QLTE VRR+P+SVVLFDE+EKAH ++N+LLQVL+DGRLTDGQGRTVDF+NTV+I TSNLG + S G+ + + +V E++KHFRPE LNR+D+I+VF L+ E++ L + VA +L + +AL +TDA Sbjct: 609 QLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDA 754
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 1.260e-34 Identity = 73/139 (52.52%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTDA 418 QLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+NT+IIMTSN+G++++ + +V++ + +FRPE LNR+DEI++F L QL+E ++Q + RLA R ++L ++DA Sbjct: 668 QLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFKNTIIIMTSNIGSQYIFEYGGDDDRYEEILSRVMEAMLSNFRPEFLNRIDEIIIFHSLQKAQLREIVKIQTHRLESRLA-RKMSLKLSDA 805
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB_BDEBA (Chaperone protein clpB OS=Bdellovibrio bacteriovorus GN=clpB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.260e-34 Identity = 77/134 (57.46%), Postives = 98/134 (73.13%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVAL 403 QLTE+VRRRPYSVVL DEVEKAH VFN LLQVLDDGRLTDGQGRTVDF+NTV+IMTSN+G++ +L M + R+ V + +R+ FRPE LNR+DEIV+F L Q+ ++Q+ VA RL + + + Sbjct: 663 QLTESVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVLIMTSNVGSQSILDPGMSE---NQKREAVNEALRERFRPEFLNRIDEIVMFKSLGEAQISGIVKVQLDLVAQRLRAKKIGI 793
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNPX (Chaperone protein clpB 2 OS=Synechococcus sp. (strain WH8102) GN=clpB2 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.260e-34 Identity = 80/143 (55.94%), Postives = 99/143 (69.23%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGA----EHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTDA 418 QLTEAVRRRPY+V+L DEVEKAH VFN LLQVLDDGRLTD QG TVDFR+TV++MTSNL + EH SG +Q QV + FRPE LNR+DE++ F PL + L RLQ+ D++ +AE+G++L V DA Sbjct: 697 QLTEAVRRRPYAVLLLDEVEKAHPDVFNLLLQVLDDGRLTDSQGLTVDFRHTVVVMTSNLASPVILEHARSGSSDDAQLQ---QQVDAALSSQFRPEFLNRIDEVIRFRPLKVKDLVRIVRLQLADLSTLMAEQGLSLEVDDA 836
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34 Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GR VDFRNTVIIMTSN+GA+ L G + R +++E++ FRPE LNR+D+I+VF LS ++LKE + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKDELKEIVTMMVNKLTQRLSEQDINIVVTD 745
BLAST of FC930698 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.149e-34 Identity = 77/146 (52.74%), Postives = 104/146 (71.23%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL----LSGMMGKVTMQ---VARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLKEGGRLQMKDVAIRLAERGVALAVTDA 418 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GR VDFRNTVIIMTSN+GA+ L +G G Q R +++E++ FRPE LNR+D+I+VF LS ++LK+ + + + RL+E+ + ++VT+A Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQDQRFAGFGGATEGQDYESIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKQIVTMMVNKLTNRLSEQDINISVTEA 746 The following BLAST results are available for this feature:
BLAST of FC930698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930698 ID=FC930698; Name=FC930698; organism=Citrus clementina; type=EST; length=420bpback to top |