FC930710

Overview
NameFC930710
Unique NameFC930710
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.164e-21
Identity = 54/121 (44.63%), Postives = 72/121 (59.50%), Query Frame = 2
Query:  302 QLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 664
            ++  AR ++R L+ +  C PI++RL WHDAGTYD       + GG N S+R E E  H AN+GL  AL L + +K K+  +TYADL+QLA   A+E  GGP I    GR D      CP+E
Sbjct:   13 EITKARRELRSLIANKNCAPIMLRLAWHDAGTYDAQ----SKTGGPNGSIRNEEEHTHGANSGLKIALDLCEGVKAKHPKITYADLYQLAGVVAVEVTGGPDIVFVPGRKD---SNVCPKE 126          

HSP 2 Score: 20.4014 bits (41), Expect = 1.164e-21
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  708 KNVFYRMGLN 737
            ++VFYRMGL+
Sbjct:  140 RDVFYRMGLS 149          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.848e-20
Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 2
Query:  284 AASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGP 646
            +A   + ++ AR+ +R L+    C P+++RL WH AGT+D +     + GG   +++   EL HAANAGL  A+++++PIK++   ++YAD +QLA   A+E +GGP +P   GR D   P
Sbjct:    9 SAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGTFDVS----SKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAP 125          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.848e-20
Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 2
Query:  284 AASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGP 646
            +A   + ++ AR+ +R L+    C P+++RL WH AGT+D +     + GG   +++   EL HAANAGL  A+++++PIK++   ++YAD +QLA   A+E +GGP +P   GR D   P
Sbjct:    9 SAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGTFDVS----SKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAP 125          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR2_MAGGR (Putative heme-binding peroxidase OS=Magnaporthe grisea GN=MGG_10368 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.413e-19
Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 2
Query:  287 ASDPDQLKSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCP 658
            AS P    + R+DI  LL           P+LVRL WH AGTYDK+ +     GG+N A +R+E E    ANAGL NA + ++P+K ++  +TYADL  LA   A+   GGP+IP + GR D +   + P
Sbjct:    2 ASKPGDFDAVRKDIVSLLDQPEYDDGSAGPVLVRLAWHSAGTYDKSTDT----GGSNGAGMRYEAEGGDPANAGLQNARQFLEPVKARHPWITYADLRTLAGVVAVRAMGGPEIPWRAGRTDFADDSRVP 127          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19
Identity = 46/119 (38.66%), Postives = 72/119 (60.50%), Query Frame = 2
Query:  305 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPE 661
            ++ A+  +R  +    C P+++RL WH AGT+D       + GG   +++ + EL H AN GL  A++L++PIK+++  V+YAD +QLA   A+E  GGP++P   GR D   PE  PE
Sbjct:   16 IEKAKRKLRGFIAEKKCAPLILRLAWHSAGTFDSKT----KTGGPFGTIKHQAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGRED--KPEPPPE 128          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 2
Query:  305 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGP 646
            ++  R  +R L+    C PI+VRL WH AGT+D       R GG   ++RF+ E  H AN+G+  AL+L+ PI++++  +++AD  QLA   A+E  GGP IP   GR D   P
Sbjct:   16 VEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQ----SRTGGPFGTMRFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQP 125          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19
Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 2
Query:  248 NRGYSTVPTTKCAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPE 661
            ++ Y TV     AA     +  A+  +R L+    C P+++RL WH AGT+D +     R GG   +++   E  HAANAGL  A++L+ PIKD+   ++YAD +QLA   A+E  GGP++P   GR D   PE  PE
Sbjct:    3 SKSYPTVSDEYLAA-----VGKAKRKLRGLIAEKNCAPLMLRLAWHSAGTFDVS----SRTGGPFGTMKNPGEQSHAANAGLDIAVRLLDPIKDQLPILSYADFYQLAGVVAVEVTGGPEVPFHPGRQD--KPEPPPE 129          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR2_YARLI (Putative cytochrome c peroxidase, mitochondrial OS=Yarrowia lipolytica GN=YALI0D04268g PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.097e-18
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 634
            P+LVRL WH +GTYDK        GG+N A++R+  E K  AN GL NA + ++PIK K+  +TYADL+ LA   AIEE  GPK+P K GR D
Sbjct:   29 PVLVRLAWHASGTYDKATGT----GGSNGATMRYMKEAKDEANNGLENARQFLEPIKAKFPWITYADLWTLAGVVAIEEMDGPKVPWKPGRQD 117          

HSP 2 Score: 20.4014 bits (41), Expect = 3.097e-18
Identity = 6/10 (60.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  708 KNVFYRMGLN 737
            +++FYRMG N
Sbjct:  141 RDIFYRMGFN 150          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR_YARLI (Cytochrome c peroxidase, mitochondrial OS=Yarrowia lipolytica GN=CCP1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 634
            P+L+RL WH +GTY+K+  ++   GG   ++RF+ E  HAAN GLVNA   ++PI +K+  ++  DL+ L   TA++E GGP IP K GRVD
Sbjct:   93 PVLLRLAWHSSGTYNKSDNKFGSSGG---TMRFKPEASHAANNGLVNARNFLKPIHEKFPWISTGDLYTLGGVTAVQELGGPIIPWKRGRVD 181          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR_USTMA (Cytochrome c peroxidase, mitochondrial OS=Ustilago maydis GN=CCP1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPE 661
            P+LVRL WH +GTYDKN       GG+N A++RF  E +H ANAGL  A   ++ I  K+  +TY+DL+ L    AI+E GGPKIP + GR D +  +  P+
Sbjct:  137 PVLVRLAWHASGTYDKN----SNTGGSNGATMRFAPESEHGANAGLGAARDFMEKIHQKFPWITYSDLWTLGGVAAIQELGGPKIPWRPGRKDATADKCTPD 234          
The following BLAST results are available for this feature:
BLAST of FC930710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
APX3_ARATH1.164e-2144.63L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX1_ORYSJ2.848e-2038.02L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI2.848e-2038.02L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
CCPR2_MAGGR1.413e-1941.54Putative heme-binding peroxidase OS=Magnaporthe gr... [more]
APX1_PEA7.014e-1938.66L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ARATH7.014e-1940.35L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX2_ORYSJ9.161e-1939.13L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
CCPR2_YARLI3.097e-1851.61Putative cytochrome c peroxidase, mitochondrial OS... [more]
CCPR_YARLI3.481e-1846.74Cytochrome c peroxidase, mitochondrial OS=Yarrowia... [more]
CCPR_USTMA5.938e-1846.08Cytochrome c peroxidase, mitochondrial OS=Ustilago... [more]

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Properties
Property NameValue
Genbank descriptionC34010E01EF PostHarvC1 Citrus clementina cDNA clone C34010E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930710 ID=FC930710; Name=FC930710; organism=Citrus clementina; type=EST; length=737bp
GATGGCAGCTCGGCCAGCGTCACTGACACAACAACAGATACGACTGCAAT
CAAAATCACAATCACCGATGGCTTCCTCTTTGAGCACCGCCGCTTCTTCT
CGCCTTCTTTGCTCCACCACCGCCGCCGCCGCAGCTGCTAAGCTTTCTTT
CTCTTCCGCTTCTTCACTCTCTTTCTCTCTCTCCTCTTCTTCCTCCCTCA
AATGCCTCAGATTCTCTCCTCTCATCAGCCAGAGGAGATCGTCTGTGAAC
AGAGGATATAGCACCGTACCTACGACGAAATGTGCGGCGTCGGATCCTGA
TCAGTTGAAGAGTGCTAGAGAAGATATTAGGGAGCTTCTCAAGTCTACAT
TTTGCCATCCTATTTTGGTTCGTCTAGGATGGCATGATGCTGGTACTTAT
GACAAGAACATTGAGGAGTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCT
TAGATTTGAGGTTGAGCTAAAACACGCAGCCAATGCTGGGCTTGTGAATG
CATTGAAACTGATTCAACCTATCAAGGACAAATATTCCGGTGTCACATAT
GCAGACTTATTCCAGTTGGCTAGCGCTACTGCTATAGAGGAAGCCGGGGG
TCCTAAGATCCCAATGAAGTATGGAAGAGTGGATGTCTCAGGACCTGAGC
AGTGCCCTGAAGAAGGAGGCTTTCTGCTGCTGGGCCTCCATCACCTGCTG
AACATTTAAGAATGTCTTTTATAGAATGGGATTAAAT
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