FC930710

Overview
NameFC930710
Unique NameFC930710
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930710_ssr174 microsatellite FC930710_ssr174:174..183. BLAST: Citrus ESTs to Prunus persica proteins V1
FC930710_ssr120 microsatellite FC930710_ssr120:120..131. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig6419 contig Ccv1_Contig6419:88..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR_CANGA (Cytochrome c peroxidase, mitochondrial OS=Candida glabrata GN=CAGL0K08184g PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDV 637
            P+LVRL WH +GT+DKN       GG   + R++ E +  +NAGL NA K ++P+K ++  ++Y DL+ L     I+E  GPKIP + GR D+
Sbjct:  108 PVLVRLAWHSSGTWDKNDNTGGSYGG---TYRYKKESQDPSNAGLENAAKFLEPVKKQFPWISYGDLYTLGGVVGIQELQGPKIPWRSGRTDL 197          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR_YEAST (Cytochrome c peroxidase, mitochondrial OS=Saccharomyces cerevisiae GN=CCP1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 634
            P+LVRL WH +GT+DK+       GG   + RF+ E    +NAGL N  K ++PI  ++  ++  DLF L   TA++E  GPKIP + GRVD
Sbjct:  111 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD 199          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR_KLULA (Cytochrome c peroxidase, mitochondrial OS=Kluyveromyces lactis GN=CCP1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 634
            P+LVRL WH AGT+D         GG   + RF +E    +N GL NA K ++PI +KY  +++ DL+ LA  TAI+E  GP IP + GRVD
Sbjct:   97 PVLVRLAWHCAGTWDAKDNTGGPYGG---TYRFAMETNDPSNNGLQNAAKFLEPIHEKYPWLSHGDLYSLAGVTAIQEMQGPTIPWRSGRVD 185          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR2_DEBHA (Putative heme-binding peroxidase OS=Debaryomyces hansenii GN=DEHA2G12166g PE=3 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 6.145e-15
Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 2
Query:  272 TTKCAASDPDQLKSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGANAS-LRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 634
            T   +  D + ++  +  I+++L           P+++RL WH   TY+K    +   GG+N S +RF  E+    N+GL  A   ++PIK K+  +TY+DL+ LA   +I+E GGPKIP + GRVD
Sbjct:  146 TKSISVDDVEYVEKVKHAIKQVLPKPDYDDGSLGPVILRLAWHCCATYNK----FTGNGGSNGSTMRFVPEITDDGNSGLDIARSALEPIKQKFPDITYSDLWTLAGKISIQEMGGPKIPWRCGRVD 268          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNE (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14
Identity = 39/93 (41.94%), Postives = 62/93 (66.67%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 634
            P+L+RL WH +GTY+K        GG+N A++RF+ E +H+AN GL  A + ++ IK ++  ++Y DL+ L    A++E+GGP IP + GR+D
Sbjct:  130 PVLLRLAWHSSGTYNKE----DGTGGSNFATMRFKPEAEHSANNGLHVAREHMEKIKQEFPWISYGDLWTLGGVCAVQESGGPTIPWRPGRID 218          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNV (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. grubii GN=CCP1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.788e-14
Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPE 661
            P+L+RL WH +GTY K        GG+N A++RF+ E +H+AN GL  A + ++ IK ++  ++Y DL+ L    AI+E+GGP IP + GR+D    +  P+
Sbjct:  130 PVLLRLAWHASGTYSKA----DGTGGSNFATMRFKPEAEHSANNGLHVAREHMEKIKQEFPWISYGDLWTLGGVCAIQESGGPTIPWRPGRIDGYAAQVTPD 227          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR3_YARLI (Putative heme-binding peroxidase OS=Yarrowia lipolytica GN=YALI0D25366g PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.794e-14
Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 634
            P+L+RL WH   TYDK    + R GG+N A++R+ +E     N GL  A   ++PIK K+  +TYADL+ LA   +IE   GP I  + GRVD
Sbjct:   66 PLLIRLAWHSCATYDK----YTRTGGSNGATMRYHLEASDEGNVGLEVARLSLEPIKRKHPWITYADLWILAGVVSIEACKGPSIKWRDGRVD 154          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR2_CRYNE (Putative heme-binding peroxidase OS=Cryptococcus neoformans GN=CNE03890 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.977e-13
Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 2
Query:  308 KSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPE 661
            ++ +E+I++++K          P+LVRL WH +G    N       GG+N A +RF  E    ANAGL  A+  + P++   S +++ADL+ LA  TAIE  GGP+IP + GR+D    +   E
Sbjct:   10 QALKEEIKKIMKQPGYDDGSAGPVLVRLAWHASG----NFSLVEHNGGSNGAGMRFPPESVDPANAGLHYAISFLLPLQSANSWISHADLWTLAGVTAIEAMGGPQIPWEPGRLDYESEQAAVE 129          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR2_CANAL (Putative heme-binding peroxidase OS=Candida albicans GN=CCP2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.582e-13
Identity = 43/101 (42.57%), Postives = 56/101 (55.45%), Query Frame = 2
Query:  359 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCP 658
            PI++RL WH   TYD         GG+N A++RF  E+    N GL  A   ++PIK +Y  ++YADL+ LA   AIE  GGP I  K GRVD +     P
Sbjct:   53 PIILRLAWHCCATYDVTTNT----GGSNGATMRFVPEITDEGNYGLDIARAALEPIKQRYPAISYADLWTLAGKVAIEYMGGPTIIWKSGRVDYTNDRCTP 149          
BLAST of FC930710 vs. ExPASy Swiss-Prot
Match: CCPR_DEBHA (Cytochrome c peroxidase, mitochondrial OS=Debaryomyces hansenii GN=CCP1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12
Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:  362 ILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPE 661
            +L RL WH +GTY K        GG   ++ ++ E     N+GL +    +Q  KDKYS +++ DL+ L    A++E GGPKI  + GR D+S   + PE
Sbjct:  111 LLTRLAWHTSGTYKKEDNTGGSYGG---TMIYKPESTDGENSGLNHGRDFLQEFKDKYSWLSHGDLWTLGGVVAVQECGGPKIKWRPGRQDISDKTRVPE 207          
The following BLAST results are available for this feature:
BLAST of FC930710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CCPR_CANGA9.480e-1641.94Cytochrome c peroxidase, mitochondrial OS=Candida ... [more]
CCPR_YEAST2.758e-1543.48Cytochrome c peroxidase, mitochondrial OS=Saccharo... [more]
CCPR_KLULA3.602e-1545.65Cytochrome c peroxidase, mitochondrial OS=Kluyvero... [more]
CCPR2_DEBHA6.145e-1535.43Putative heme-binding peroxidase OS=Debaryomyces h... [more]
CCPR_CRYNE1.048e-1441.94Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
CCPR_CRYNV1.788e-1440.20Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
CCPR3_YARLI6.794e-1444.09Putative heme-binding peroxidase OS=Yarrowia lipol... [more]
CCPR2_CRYNE1.977e-1336.29Putative heme-binding peroxidase OS=Cryptococcus n... [more]
CCPR2_CANAL2.582e-1342.57Putative heme-binding peroxidase OS=Candida albica... [more]
CCPR_DEBHA2.854e-1237.00Cytochrome c peroxidase, mitochondrial OS=Debaryom... [more]

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Properties
Property NameValue
Genbank descriptionC34010E01EF PostHarvC1 Citrus clementina cDNA clone C34010E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930710 ID=FC930710; Name=FC930710; organism=Citrus clementina; type=EST; length=737bp
GATGGCAGCTCGGCCAGCGTCACTGACACAACAACAGATACGACTGCAAT
CAAAATCACAATCACCGATGGCTTCCTCTTTGAGCACCGCCGCTTCTTCT
CGCCTTCTTTGCTCCACCACCGCCGCCGCCGCAGCTGCTAAGCTTTCTTT
CTCTTCCGCTTCTTCACTCTCTTTCTCTCTCTCCTCTTCTTCCTCCCTCA
AATGCCTCAGATTCTCTCCTCTCATCAGCCAGAGGAGATCGTCTGTGAAC
AGAGGATATAGCACCGTACCTACGACGAAATGTGCGGCGTCGGATCCTGA
TCAGTTGAAGAGTGCTAGAGAAGATATTAGGGAGCTTCTCAAGTCTACAT
TTTGCCATCCTATTTTGGTTCGTCTAGGATGGCATGATGCTGGTACTTAT
GACAAGAACATTGAGGAGTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCT
TAGATTTGAGGTTGAGCTAAAACACGCAGCCAATGCTGGGCTTGTGAATG
CATTGAAACTGATTCAACCTATCAAGGACAAATATTCCGGTGTCACATAT
GCAGACTTATTCCAGTTGGCTAGCGCTACTGCTATAGAGGAAGCCGGGGG
TCCTAAGATCCCAATGAAGTATGGAAGAGTGGATGTCTCAGGACCTGAGC
AGTGCCCTGAAGAAGGAGGCTTTCTGCTGCTGGGCCTCCATCACCTGCTG
AACATTTAAGAATGTCTTTTATAGAATGGGATTAAAT
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