FC930714

Overview
NameFC930714
Unique NameFC930714
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:23..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.560e-31
Identity = 73/170 (42.94%), Postives = 108/170 (63.53%), Query Frame = 3
Query:  210 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL-GARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 710
            A+FE +   +G+AY  L E+++R   F+ NL  + EH + N   + G+ +F DL+  E+ + +L GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++
Sbjct:   36 ALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLL 201          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.560e-31
Identity = 79/186 (42.47%), Postives = 105/186 (56.45%), Query Frame = 3
Query:  198 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNS----ENRTYKVGLNRFADLTNEEYRSM-----HLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDKWSI 725
            D +   +  + ++H K Y    E+  R +IF EN   I +HN        +YK+GLN++AD+ + E++       H   +   +RT L       Y+P     +P SVDWR+ GAV  VKDQG CGSCWAFS+  A+EG +    G L+SLSEQ LVDC T Y N GCNGGLMD AF +I D   I
Sbjct:   22 DLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGAT---YIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 204          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.038e-31
Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 3
Query:  120 VSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDKWSI 725
            V S L + +VSY    +  S       +    F  W+  H + Y++  E   R++IFK N+ ++ + NS+     +GLN FAD+TN+EYR+ +LG  F         +       ++      +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II+   I
Sbjct:    3 VLSFLCLLLVSYASAKQQFSEL-----QYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEE------KIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGI 196          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.662e-31
Identity = 82/222 (36.94%), Postives = 124/222 (55.86%), Query Frame = 3
Query:   90 MAMFLLFLFTVSSALDMSIVSYDKTHES----KSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRT---YKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEAL---PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDKWSI 725
            M   +L LF   S L +S  S   TH S      + + T  +V ++F+ W  +HG+ Y+   E+ KR EIFK N  +I + N+  ++   +++GLN+FAD+T +E+   +L A    K  S + K +N+ + +   +    P S DWRKKG + +VK QG CG  WAFS   A+E  + I TG L+SLSEQELVDC    +EG   G    +FE++++   I
Sbjct:    1 MGFLVLLLF---SLLGLSSSSSISTHRSILDLDLTKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQA---PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGI 215          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.476e-31
Identity = 75/172 (43.60%), Postives = 100/172 (58.14%), Query Frame = 3
Query:  216 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 710
            +E +  K GK Y    E+  R  +F + L+FI EHN        TY + +N F+DLT+EE  +   G          + +     LP+     P +  VDWR KGAV  VKDQG CGSCWAFS +AA+EG + + TG L+SLSEQ LVDC +SY N+GCNGG    A+++II
Sbjct:   20 WENFKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMT--------RRRHPLSVLPKSAPTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYII 183          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.476e-31
Identity = 75/176 (42.61%), Postives = 101/176 (57.39%), Query Frame = 3
Query:  195 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 707
            D    A +  W   H + Y    E+E R  I+++N+R I  HN E       + + +N F D+TNEE+R +  G R        K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC  +  N+GCNGGLMD+AF++I
Sbjct:   22 DQTFSAEWHQWKSTHRRLYGT-NEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQ------KHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYI 190          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.540e-31
Identity = 71/178 (39.89%), Postives = 109/178 (61.24%), Query Frame = 3
Query:  216 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC--DTSYNEGCNGGLMDYAFEFIIDKWSI 725
            +E +  K G+ Y  L E+  R  +F +NL++I+E N +      TY + +N+F+D+TNE++ ++  G + G +  ++ +           +A P+S  VDWR KGAV  VKDQG CGSCWAFST   +EG + + TG L+SLSEQ+LVDC   + YN+GCNGG ++ A  ++ D   +
Sbjct:   20 WEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTST---------DAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGV 188          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.540e-31
Identity = 75/184 (40.76%), Postives = 108/184 (58.70%), Query Frame = 3
Query:  177 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIID 713
            S++ + D  + A +  W   H + Y  + E+E R  ++++N + ID HN E       +++ +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I D
Sbjct:   16 SAAPKLDPNLDAHWHQWKATHRRLYG-MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKD 192          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 4.540e-31
Identity = 75/184 (40.76%), Postives = 108/184 (58.70%), Query Frame = 3
Query:  177 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIID 713
            S++ + D  + A +  W   H + Y  + E+E R  ++++N + ID HN E       +++ +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I D
Sbjct:   16 SAAPKLDPNLDAHWHQWKATHRRLYG-MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKD 192          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.930e-31
Identity = 75/176 (42.61%), Postives = 100/176 (56.82%), Query Frame = 3
Query:  195 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 707
            D    A +  W   H + Y    E+E R  ++++N+R I  HN E    K G    +N F D+TNEE+R +  G R        K K+   +   +   +P +VDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC     N+GCNGGLMD+AF++I
Sbjct:   22 DQTFNAQWHQWKSTHRRLYGT-NEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQ------KHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYI 190          
The following BLAST results are available for this feature:
BLAST of FC930714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP2_LEIPI1.560e-3142.94Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATL_SARPE1.560e-3142.47Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CYSP4_DICDI2.038e-3137.86Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
P34_SOYBN2.662e-3136.94P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CRUST_PANBO3.476e-3143.60Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATL1_MOUSE3.476e-3142.61Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CYSP1_HOMAM4.540e-3139.89Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATL2_BOVIN4.540e-3140.76Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_BOVIN4.540e-3140.76Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATL1_RAT5.930e-3142.61Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34010E05EF PostHarvC1 Citrus clementina cDNA clone C34010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930714 ID=FC930714; Name=FC930714; organism=Citrus clementina; type=EST; length=726bp
GACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAAG
TTCTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTT
TTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTAT
CTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGAT
GAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTA
TAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATC
TTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGG
TTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCT
GGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCA
ACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGG
AGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAG
TTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTG
TTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGAT
ACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGA
GTTCATTATTGATAAATGGAGTATTG
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