FC930714

Overview
NameFC930714
Unique NameFC930714
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:23..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.930e-31
Identity = 74/184 (40.22%), Postives = 108/184 (58.70%), Query Frame = 3
Query:  177 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIID 713
            S++   D  + A +  W   H + Y  + E+  R  ++++N++ I+ HN E R    ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG LISLSEQ LVDC     NEGCNGGLMDYAF+++ D
Sbjct:   16 SATLTFDHSLEAQWTKWKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQD 192          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.930e-31
Identity = 75/166 (45.18%), Postives = 106/166 (63.86%), Query Frame = 3
Query:  216 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 707
            F++W+V+H K Y++  E   R + F  NLR I+ HN+ N T+K+GLN+F+D++ +E +  +L +    +  +  + +SN YL   G   P S+DWRKKG  V  VK+QGSCGSCW FST  A+E    I TG L  L+EQ+LVDC  ++ N GC GGL   AFE+I
Sbjct:   35 FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWS----EPQNCSATKSN-YLRGTGP-YPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYI 193          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.930e-31
Identity = 75/166 (45.18%), Postives = 104/166 (62.65%), Query Frame = 3
Query:  216 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEA-LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFI 707
            F  +  ++GK Y ++ E + RF +FKENL  I   N +  +YK+ LN+FADLT +E++   LGA   A+  S   K S++    + EA +PD+ DWR+ G V+ VK+QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GC+GGL   AFE+I
Sbjct:   59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGA---AQNCSATLKGSHK----ITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYI 217          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31
Identity = 75/184 (40.76%), Postives = 107/184 (58.15%), Query Frame = 3
Query:  177 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIID 713
            S++ + D  + A +  W   H + Y  + E+  R  ++++N++ I+ HN E    K G    +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  NEGCNGGLMD AF ++ D
Sbjct:   16 SAAPKFDQSLNAQWYQWKATHRRLYG-MNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKD 192          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30
Identity = 73/184 (39.67%), Postives = 108/184 (58.70%), Query Frame = 3
Query:  177 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIID 713
            S++ + D  + A +  W   HG+ Y  + E+  R  ++++N++ I+ HN E       + + +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGGLMD AF+++ D
Sbjct:   16 SAAPKLDQNLDADWYKWKATHGRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKD 192          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.943e-30
Identity = 70/173 (40.46%), Postives = 102/173 (58.96%), Query Frame = 3
Query:  210 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIID 713
            A +  W   H + Y  + E+  R  ++++N++ I+ HN E      ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     NEGCNGGLMDYAF+++ D
Sbjct:   27 AQWTKWKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVAD 192          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 131.724 bits (330), Expect = 3.843e-30
Identity = 73/167 (43.71%), Postives = 104/167 (62.28%), Query Frame = 3
Query:  216 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 710
            F++W+ KH K Y+   E   R + F  N R I+ HN+ N T+K+ LN+F+D++  E +  +L +    +  +  + +SN YL   G   P SVDWRKKG  V+ VK+QG+CGSCW FST  A+E    I TG ++SL+EQ+LVDC   + N GC GGL   AFE+I+
Sbjct:   35 FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWS----EPQNCSATKSN-YLRGTGP-YPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYIL 194          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.020e-30
Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 3
Query:  183 SWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID 713
            S   ++ +   F A+  K+GK Y    E+  RF  F+EN+       + N     G+  F+D+T EE+R+ +   R GA   +   KR  + +       P +VDWR+KGAV  VK QG CGSCWAFSTI  +EG  ++    L+SLSEQ LV CDT  + GCNGGLMD AF +I++
Sbjct:   30 SLHVEESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARY---RNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNAFNWIVN 202          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.020e-30
Identity = 74/170 (43.53%), Postives = 101/170 (59.41%), Query Frame = 3
Query:  216 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 707
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYV 189          
BLAST of FC930714 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.020e-30
Identity = 74/170 (43.53%), Postives = 101/170 (59.41%), Query Frame = 3
Query:  216 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 707
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYV 189          
The following BLAST results are available for this feature:
BLAST of FC930714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATL1_HUMAN5.930e-3140.22Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATH_BOVIN5.930e-3145.18Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
ALEUL_ARATH5.930e-3145.18Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATL1_CANFA7.744e-3140.76Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL1_PIG1.011e-3039.67Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_CERAE2.943e-3040.46Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATH_HUMAN3.843e-3043.71Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CYSP_TRYBB5.020e-3041.24Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATK_MACMU5.020e-3043.53Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA5.020e-3043.53Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34010E05EF PostHarvC1 Citrus clementina cDNA clone C34010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930714 ID=FC930714; Name=FC930714; organism=Citrus clementina; type=EST; length=726bp
GACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAAG
TTCTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTT
TTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTAT
CTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGAT
GAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTA
TAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATC
TTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGG
TTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCT
GGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCA
ACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGG
AGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAG
TTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTG
TTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGAT
ACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGA
GTTCATTATTGATAAATGGAGTATTG
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