FC930724

Overview
NameFC930724
Unique NameFC930724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.991e-28
Identity = 63/134 (47.01%), Postives = 90/134 (67.16%), Query Frame = 2
Query:  308 KIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLS 703
            +IVCT+GP+++SV  L+ L+++GM+VAR NFSHG+HEY Q T+NN+RAA     +   + LDTKGPEIRTG  KDG+ +    G  + V+TD  Y+  G +E   + Y +L   V+PG +I   DG +TL V+S
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGE-VSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDDGVMTLRVVS 155          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_XENLA (Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 73/173 (42.20%), Postives = 108/173 (62.43%), Query Frame = 2
Query:  239 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA--------MHNTQILCAVMLDTKGPEIRTGFLKDG--KPIQLKEGQEITVSTDYDFKGN--EEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPN 715
            AMA+  +E + R D+ ++  + + T I+CT+GPASRSV ML++++++GMN+AR NFSHGTHEY   T+ N+R A        +H   +  AV LDTKGPEIRTG +K      ++LK+G  + ++ D  F+ N  E ++ + YK L   VKPG+ I   DG I+L V    P+
Sbjct:   17 AMADTFLEHMCRLDIDSEPIVARNTGIICTIGPASRSVEMLKEMIKSGMNIARLNFSHGTHEYHAGTIKNVREATESLASNPIHYRPV--AVALDTKGPEIRTGLIKGSGTAEVELKKGATMRITLDDAFQENCDENVLWVDYKNLTKVVKPGSKIYVDDGLISLLVKEIGPD 187          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAAW (Pyruvate kinase OS=Staphylococcus aureus (strain MW2) GN=pyk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  M+EKL+ AGMNVAR NFSHG+HE  +  ++ +R        + A++LDTKGPEIRT  +KDG  I+L+ G E+ VS + + +G  E  +++Y+ L  DV+ G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAAS (Pyruvate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  M+EKL+ AGMNVAR NFSHG+HE  +  ++ +R        + A++LDTKGPEIRT  +KDG  I+L+ G E+ VS + + +G  E  +++Y+ L  DV+ G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAAR (Pyruvate kinase OS=Staphylococcus aureus (strain MRSA252) GN=pyk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  M+EKL+ AGMNVAR NFSHG+HE  +  ++ +R        + A++LDTKGPEIRT  +KDG  I+L+ G E+ VS + + +G  E  +++Y+ L  DV+ G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAAN (Pyruvate kinase OS=Staphylococcus aureus (strain N315) GN=pyk PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  M+EKL+ AGMNVAR NFSHG+HE  +  ++ +R        + A++LDTKGPEIRT  +KDG  I+L+ G E+ VS + + +G  E  +++Y+ L  DV+ G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAAM (Pyruvate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pyk PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  M+EKL+ AGMNVAR NFSHG+HE  +  ++ +R        + A++LDTKGPEIRT  +KDG  I+L+ G E+ VS + + +G  E  +++Y+ L  DV+ G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAAC (Pyruvate kinase OS=Staphylococcus aureus (strain COL) GN=pyk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  M+EKL+ AGMNVAR NFSHG+HE  +  ++ +R        + A++LDTKGPEIRT  +KDG  I+L+ G E+ VS + + +G  E  +++Y+ L  DV+ G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAAB (Pyruvate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pyk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  M+EKL+ AGMNVAR NFSHG+HE  +  ++ +R        + A++LDTKGPEIRT  +KDG  I+L+ G E+ VS + + +G  E  +++Y+ L  DV+ G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAA8 (Pyruvate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=pyk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  M+EKL+ AGMNVAR NFSHG+HE  +  ++ +R        + A++LDTKGPEIRT  +KDG  I+L+ G E+ VS + + +G  E  +++Y+ L  DV+ G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDID 136          
The following BLAST results are available for this feature:
BLAST of FC930724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
KPYK1_TRYBB5.991e-2847.01Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_XENLA2.973e-2742.20Pyruvate kinase muscle isozyme OS=Xenopus laevis G... [more]
KPYK_STAAW2.973e-2748.53Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAS2.973e-2748.53Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAR2.973e-2748.53Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAN2.973e-2748.53Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAAM2.973e-2748.53Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAC2.973e-2748.53Pyruvate kinase OS=Staphylococcus aureus (strain C... [more]
KPYK_STAAB2.973e-2748.53Pyruvate kinase OS=Staphylococcus aureus (strain b... [more]
KPYK_STAA82.973e-2748.53Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]

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Properties
Property NameValue
Genbank descriptionC34010F03EF PostHarvC1 Citrus clementina cDNA clone C34010F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930724 ID=FC930724; Name=FC930724; organism=Citrus clementina; type=EST; length=716bp
GACTAGTAACCAGTCAGGTACGCCCCTCACTCTCGTCTGAGTTTATACAA
TTTAGTGATTTACTAATAAATGAATAAATAAATAAATAAAAGGCAGAAAC
GAATAATTACAAGTAAAAATCAGAATTAGACACTGGCATTTAGCGCCGTG
GAGAAGCAAAGGTGTGCCAGCGAACAGCTGTTCTGTTGGGGTAACTGACT
GATATATTCGTTATTGTGAACTAGACTTGATAAGGTAAGCTATGGCGAAC
ATAGATATAGAGGGACTCTTGAGAGATGTGCCAAATGATAAGCGGTTGCC
GAAGACGAAGATTGTGTGTACTTTAGGTCCTGCTTCCCGTTCTGTGCCGA
TGCTTGAGAAGCTTCTGAGGGCTGGAATGAATGTTGCTCGTTTCAATTTC
TCTCACGGTACGCACGAGTATCAGCAGGAGACTTTGAACAATCTCAGAGC
TGCCATGCACAACACCCAGATCCTCTGTGCTGTCATGCTCGATACCAAGG
GACCTGAGATTCGAACTGGTTTCCTTAAGGATGGAAAACCCATACAACTT
AAAGAAGGTCAGGAAATTACTGTATCTACTGATTATGACTTCAAGGGTAA
TGAAGAAATGATCACCATGAGCTACAAGAAGCTGCCTGTGGATGTGAAGC
CTGGAAATACCATCTTGTGTGCTGATGGCACCATTACCCTGACTGTCTTG
TCTTGTGATCCAAATC
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