FC930724

Overview
NameFC930724
Unique NameFC930724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  M+EKL+ AGMNVAR NFSHG+HE  +  ++ +R        + A++LDTKGPEIRT  +KDG  I+L+ G E+ VS + + +G  E  +++Y+ L  DV+ G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK2_TRYBB (Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=PYK2 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27
Identity = 63/134 (47.01%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  308 KIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLS 703
            +IVCT+GP+++SV  L+ L+++GM+VAR NFSHG+HEY Q T+NN+RAA     +   + LDTKGPEIRTG  KDG+ +    G  + V+TD  Y+  G +E   + Y +L   V  G +I   DG +TL VLS
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGE-VTFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTKAVPVGGSIYVDDGVMTLRVLS 155          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAS1 (Pyruvate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pyk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.130e-26
Identity = 67/136 (49.26%), Postives = 89/136 (65.44%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  MLEKL++AGMNVAR NFSHG     +  ++ +R          A++LDTKGPEIRT  +KDG  I+L++G E+TVS   + +G  E  +++Y+ L  DV+ G+ IL  DG I L V S D
Sbjct:    3 KTKIVCTIGPASESEEMLEKLIKAGMNVARLNFSHGDQAEHKARIDTIRKVSKRLGKTVAILLDTKGPEIRTHNMKDGL-IELEKGSEVTVSMT-EVEGTPEKFSVTYENLINDVEEGSYILLDDGLIELQVKSID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_DROME (Pyruvate kinase OS=Drosophila melanogaster GN=PyK PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 65/139 (46.76%), Postives = 91/139 (65.47%), Query Frame = 2
Query:  311 IVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQIL------CAVMLDTKGPEIRTGFL--KDGKPIQLKEGQEITVSTDYDF--KGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 697
            IVCT+GPAS SV MLEK++  GMN+AR NFSHG+HEY   T+ N+R A+ N           A+ LDTKGPEIRTG +       I+LK+G++I ++T+ +F  KG+ E++ + Y+ +   VKPGN +   DG I+L V
Sbjct:   50 IVCTIGPASSSVEMLEKMMATGMNIARMNFSHGSHEYHAATVANVRQAVKNYSAKLGYEHPVAIALDTKGPEIRTGLIGGSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVVKPGNRVFVDDGLISLIV 188          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAHJ (Pyruvate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pyk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.517e-26
Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S  MLEKL++AGMNVAR NFSHG+HE  +  ++ +R           ++LDTKGPEIRT  +KDG  I L++G+E+ VS     +G  E  +++Y+ L  DV+ G+ IL  DG + L V   D
Sbjct:    3 KTKIVCTIGPASESEEMLEKLMKAGMNVARLNFSHGSHEEHKARIDTIRKVADRLGKTIGILLDTKGPEIRTHDMKDGL-IMLEKGKEVIVSMS-QVEGTPEKFSVTYEDLINDVQVGSYILLDDGLVELQVKDID 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.294e-26
Identity = 67/136 (49.26%), Postives = 87/136 (63.97%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS SV  L +L+ AGMNVAR NFSHG HE     + N+R A   T    A++LDTKGPEIRT  +++G  I+LKEG ++ +S   +  G  E I+++Y  L  DV  G  IL  DG I+L V + D
Sbjct:    4 KTKIVCTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENG-AIELKEGSKLVISMS-EVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVD 137          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.608e-26
Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KTKIVCT+GPAS S+ ML KL+ +GMNVAR NFSHG  E     + N+R A         ++LDTKGPEIRT  +++G  I+L+ G+E+ +S D +  G  + I+++Y+ L  DV+ G+TIL  DG I L VL  D
Sbjct:    3 KTKIVCTIGPASESIEMLTKLMESGMNVARLNFSHGDFEEHGARIKNIREASKKLGKNVGILLDTKGPEIRTHTMENG-GIELETGKELIISMD-EVVGTTDKISVTYEGLVHDVEQGSTILLDDGLIGLEVLDVD 136          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 9.565e-26
Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 2
Query:  305 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 697
            T I+CT+GPASRSV ML++++++GMNVAR NFSHGTHEY  ET+ N+RAA     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ I   DG I+L V
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQV 185          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.565e-26
Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 697
            KTKIVCT+GPAS S  MLEKL+ AGMNVAR NFSHG+HE  +  ++ +R           ++LDTKGPEIRT  +KDG  I L++G+E+ VS + + +G  E  +++Y+ L  DV  G+ IL  DG + L V
Sbjct:    3 KTKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGL-IVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQV 132          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.565e-26
Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 697
            KTKIVCT+GPAS S  MLEKL+ AGMNVAR NFSHG+HE  +  ++ +R           ++LDTKGPEIRT  +KDG  I L++G+E+ VS + + +G  E  +++Y+ L  DV  G+ IL  DG + L V
Sbjct:    3 KTKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGL-IVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQV 132          
The following BLAST results are available for this feature:
BLAST of FC930724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
KPYK_STAA32.973e-2748.53Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYK2_TRYBB6.624e-2747.01Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_STAS11.130e-2649.26Pyruvate kinase OS=Staphylococcus saprophyticus su... [more]
KPYK_DROME1.476e-2646.76Pyruvate kinase OS=Drosophila melanogaster GN=PyK ... [more]
KPYK_STAHJ2.517e-2647.79Pyruvate kinase OS=Staphylococcus haemolyticus (st... [more]
KPYK_BACST4.294e-2649.26Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]
KPYK_BACSU5.608e-2647.79Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]
KPYM_RAT9.565e-2648.23Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYK_STAES9.565e-2648.48Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ9.565e-2648.48Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]

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Properties
Property NameValue
Genbank descriptionC34010F03EF PostHarvC1 Citrus clementina cDNA clone C34010F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930724 ID=FC930724; Name=FC930724; organism=Citrus clementina; type=EST; length=716bp
GACTAGTAACCAGTCAGGTACGCCCCTCACTCTCGTCTGAGTTTATACAA
TTTAGTGATTTACTAATAAATGAATAAATAAATAAATAAAAGGCAGAAAC
GAATAATTACAAGTAAAAATCAGAATTAGACACTGGCATTTAGCGCCGTG
GAGAAGCAAAGGTGTGCCAGCGAACAGCTGTTCTGTTGGGGTAACTGACT
GATATATTCGTTATTGTGAACTAGACTTGATAAGGTAAGCTATGGCGAAC
ATAGATATAGAGGGACTCTTGAGAGATGTGCCAAATGATAAGCGGTTGCC
GAAGACGAAGATTGTGTGTACTTTAGGTCCTGCTTCCCGTTCTGTGCCGA
TGCTTGAGAAGCTTCTGAGGGCTGGAATGAATGTTGCTCGTTTCAATTTC
TCTCACGGTACGCACGAGTATCAGCAGGAGACTTTGAACAATCTCAGAGC
TGCCATGCACAACACCCAGATCCTCTGTGCTGTCATGCTCGATACCAAGG
GACCTGAGATTCGAACTGGTTTCCTTAAGGATGGAAAACCCATACAACTT
AAAGAAGGTCAGGAAATTACTGTATCTACTGATTATGACTTCAAGGGTAA
TGAAGAAATGATCACCATGAGCTACAAGAAGCTGCCTGTGGATGTGAAGC
CTGGAAATACCATCTTGTGTGCTGATGGCACCATTACCCTGACTGTCTTG
TCTTGTGATCCAAATC
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