FC930724

Overview
NameFC930724
Unique NameFC930724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYR_MOUSE (Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pklr PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.443e-23
Identity = 67/170 (39.41%), Postives = 102/170 (60.00%), Query Frame = 2
Query:  239 AMANIDIEGL-LRDVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN--TQIL----CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQEITVSTDYDF--KGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDP 712
            AMA+  +E L L D+ ++    + T I+ T+GPASRSV  L+++++AGMN+AR NFSHG+HEY  E++ N+R A  +  T  L     A+ LDTKGPEIRTG L+ G    +++ +G ++ V+ D  F  +G+ + + + Y  +   V  G  I   DG I+L V    P
Sbjct:   64 AMADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREAAESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFRTRGDAKTVWVDYHNITQVVAVGGRIYIDDGLISLVVRKIGP 233          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_TRYBO (Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.803e-23
Identity = 57/133 (42.86%), Postives = 83/133 (62.41%), Query Frame = 2
Query:  308 KIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDF--KGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            KI+CT+GP+S+SV +L+ L++AG+NVAR NFSHGT+EY Q+T++N+R A     I   + LDTKGPEIRTG    G  + ++  + + ++TD  F  KG  E   + Y  +   V  G  I   DG + L V+
Sbjct:   26 KIICTIGPSSQSVEVLKDLMKAGLNVARMNFSHGTYEYHQKTIDNVRKAASELGIHVGIALDTKGPEIRTGLFPAG-DVVIEAHKTVILTTDETFKEKGTAEKFYVDYMNITKVVPVGGHIFVDDGLLDLIVV 157          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.579e-23
Identity = 62/132 (46.97%), Postives = 82/132 (62.12%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 697
            KTKIVCT+GPAS SV  L +L+ AGMNVAR NFSHG  E     + N+R A         ++LDTKGPEIRT  +++G  I+L  G ++ VS D +  G  + I+++Y  L  DV  G+TIL  DG + L V
Sbjct:    3 KTKIVCTIGPASESVEKLTQLMEAGMNVARLNFSHGDFEEHGARIKNIREAAGKLGKDIGILLDTKGPEIRTHTMENGS-IELAAGSQLIVSMD-EVIGTPDKISVTYDGLIHDVSVGSTILLDDGLVGLEV 132          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.898e-23
Identity = 67/170 (39.41%), Postives = 101/170 (59.41%), Query Frame = 2
Query:  239 AMANIDIEGL-LRDVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN--TQIL----CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQEITVSTDYDF--KGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDP 712
            AMA+  +E L L D+ +     + T I+ T+GPASRSV  L+++++AGMN+AR NFSHG+HEY  E++ N+R A  +  T  L     A+ LDTKGPEIRTG L+ G    +++ +G ++ V+ D  F  +G+ + + + Y  +   V  G  I   DG I+L V    P
Sbjct:   64 AMADTFLEHLCLLDIDSQPVAARSTSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREATESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFQTRGDAKTVWVDYHNITRVVAVGGRIYIDDGLISLVVQKIGP 233          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22
Identity = 62/138 (44.93%), Postives = 78/138 (56.52%), Query Frame = 2
Query:  296 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            + KTKIV TLGPAS  +  + KL  AG NV RFNFSHG HE     +N +R     T  L  + LDTKG EIRT   + GK   +  G EI VS D    GN++MI ++Y  L  D   G T+L  DG + LT+ + D
Sbjct:    1 MKKTKIVSTLGPASDDIETITKLAEAGANVFRFNFSHGNHEEHLARMNMVREVEKKTGKLLGIALDTKGAEIRTTDQEGGK-FTINTGDEIRVSMDATKAGNKDMIHVTYPGLFDDTHVGGTVLIDDGAVGLTIKAKD 137          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYR_CANFA (Pyruvate kinase isozyme R (Fragment) OS=Canis familiaris GN=PKLR PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.912e-22
Identity = 67/169 (39.64%), Postives = 100/169 (59.17%), Query Frame = 2
Query:  239 AMANIDIEGL-LRDVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN--TQIL----CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQEITVSTDYDFK--GNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            AMA+  +E L L D+ ++    + T I+ T+GPAS SV  L+++++AGMN+AR NFSHG+HEY  +++ N+R A+ +  T  L     A+ LDTKGPEIRTG LK G    ++L +G  + V+ D  F+  G+   + + Y  +   V  G  I   DG I+L V   D
Sbjct:    9 AMADTFLEHLCLLDIDSEPVAARSTSIIATIGPASHSVERLKEMIKAGMNIARLNFSHGSHEYHAQSIANIREAVESFATSPLGYRPVAIALDTKGPEIRTGVLKGGPETEVELVKGSWVLVTVDPAFRTLGDAHTVWVDYPNIVKVVPVGGRIFIDDGLISLQVKKID 177          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_ASPNG (Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.912e-22
Identity = 56/141 (39.72%), Postives = 83/141 (58.87%), Query Frame = 2
Query:  290 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQI--LCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            K   +T I+ T+GP + SV  +  L  AG+NV R NFSHG+++Y Q  ++N R A   TQ+    A+ LDTKGPEIRTG   D K I +K+G E+ ++TD  Y    +++ + + YK +   + PG  I   DG ++  VL
Sbjct:   30 KNFRRTSIIGTIGPKTNSVEKINSLRTAGLNVVRMNFSHGSYQYHQSVIDNAREAA-KTQVGRPLAIALDTKGPEIRTGNTPDDKDIPIKQGHELNITTDEQYATASDDKNMYLDYKNITKVISPGKLIYVDDGILSFEVL 169          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_THEMA (Pyruvate kinase OS=Thermotoga maritima GN=pyk PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.379e-22
Identity = 54/132 (40.91%), Postives = 86/132 (65.15%), Query Frame = 2
Query:  305 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            TKIVCT+GP + S  M+EK++  G+NV R N SHG    Q++ +  ++      +   A+++D  GP+IRTG+L + + ++LKEGQ  T++T  +  GNE +++++   LP DVK G+TIL +DG I L V+
Sbjct:    4 TKIVCTVGPRTDSYEMIEKMIDLGVNVFRINTSHGDWNEQEQKILKIKDLREKKKKPVAILIDLAGPKIRTGYL-EKEFVELKEGQIFTLTTK-EILGNEHIVSVNLSSLPKDVKKGDTILLSDGEIVLEVI 133          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_AGABI (Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.094e-21
Identity = 58/140 (41.43%), Postives = 78/140 (55.71%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQ--ILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            KT I+ T+GP   +V  L  +  AG+N+ R NFSHGTHEY Q  ++N R  + N       A+ LDTKGPEIRTG  +DG    +K G E  V+TD  Y    + +++ + Y  L     PG  I   DG I+L +LS D
Sbjct:   34 KTAIIATIGPKINTVEKLTDVRLAGVNIVRMNFSHGTHEYHQSVIDNTRQMIKNDPHGRPVAIALDTKGPEIRTGQTRDGNDYPIKAGDEFIVTTDPKYSDICDNKVLFVDYANLASVTAPGKLIYIDDGIISLLILSID 173          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_CHLMU (Pyruvate kinase OS=Chlamydia muridarum GN=pyk PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.867e-21
Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 2
Query:  296 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLS 703
            + +TKI+CT+GPA+ +  MLEKLL AGMNVAR NFSHGTHE    T+  L+      Q+  A+MLDTKGPEIR G ++   PI++K G  +T+++       E  +T+    +   V+    +L  DG I   V++
Sbjct:    2 IARTKIICTIGPATNTPEMLEKLLDAGMNVARLNFSHGTHESHGRTIAILKELREKRQVPLAIMLDTKGPEIRLGQVE--SPIKVKPGDRLTLTSKEILGSKEAGVTLYPSCVFPFVRERAPVLIDDGYIQAVVVN 135          
The following BLAST results are available for this feature:
BLAST of FC930724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
KPYR_MOUSE4.443e-2339.41Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pk... [more]
KPYK_TRYBO5.803e-2342.86Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE... [more]
KPYK_BACLI7.579e-2346.97Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYR_RAT9.898e-2339.41Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]
KPYK_LACDE1.293e-2244.93Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYR_CANFA4.912e-2239.64Pyruvate kinase isozyme R (Fragment) OS=Canis fami... [more]
KPYK_ASPNG4.912e-2239.72Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 ... [more]
KPYK_THEMA8.379e-2240.91Pyruvate kinase OS=Thermotoga maritima GN=pyk PE=1... [more]
KPYK_AGABI1.094e-2141.43Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 ... [more]
KPYK_CHLMU1.867e-2141.91Pyruvate kinase OS=Chlamydia muridarum GN=pyk PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC34010F03EF PostHarvC1 Citrus clementina cDNA clone C34010F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930724 ID=FC930724; Name=FC930724; organism=Citrus clementina; type=EST; length=716bp
GACTAGTAACCAGTCAGGTACGCCCCTCACTCTCGTCTGAGTTTATACAA
TTTAGTGATTTACTAATAAATGAATAAATAAATAAATAAAAGGCAGAAAC
GAATAATTACAAGTAAAAATCAGAATTAGACACTGGCATTTAGCGCCGTG
GAGAAGCAAAGGTGTGCCAGCGAACAGCTGTTCTGTTGGGGTAACTGACT
GATATATTCGTTATTGTGAACTAGACTTGATAAGGTAAGCTATGGCGAAC
ATAGATATAGAGGGACTCTTGAGAGATGTGCCAAATGATAAGCGGTTGCC
GAAGACGAAGATTGTGTGTACTTTAGGTCCTGCTTCCCGTTCTGTGCCGA
TGCTTGAGAAGCTTCTGAGGGCTGGAATGAATGTTGCTCGTTTCAATTTC
TCTCACGGTACGCACGAGTATCAGCAGGAGACTTTGAACAATCTCAGAGC
TGCCATGCACAACACCCAGATCCTCTGTGCTGTCATGCTCGATACCAAGG
GACCTGAGATTCGAACTGGTTTCCTTAAGGATGGAAAACCCATACAACTT
AAAGAAGGTCAGGAAATTACTGTATCTACTGATTATGACTTCAAGGGTAA
TGAAGAAATGATCACCATGAGCTACAAGAAGCTGCCTGTGGATGTGAAGC
CTGGAAATACCATCTTGTGTGCTGATGGCACCATTACCCTGACTGTCTTG
TCTTGTGATCCAAATC
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